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Search term: YGR256W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name GND2
SGD link S000003488
Alternative ID YGR256W
Description 6-phosphogluconate dehydrogenase (decarboxylating), catalyzes an NADPH regenerating reaction in the pentose phosphate pathway; required for growth on D-glucono-delta-lactone
Synonyms YGR256W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2653 ACDHYPE

KOGs classification KOGs description
METABOLISM 6-phosphogluconate dehydrogenase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g64190 GI:15222639
Arabidopsis thaliana (Ath) At3g02360 GI:15232888
Arabidopsis thaliana (Ath) At5g41670 GI:15238151
Caenorhabditis elegans (Cel) CE06508
(WBGene00012015)		 GI:17542558 Q17761
Drosophila melanogaster (Dme) 7290271 GI:7290271
Homo sapiens (Hsa) Hs17456250 GI:17456250
Homo sapiens (Hsa) Hs18545097 GI:18545097
Homo sapiens (Hsa) Hs18579586 GI:18579586
Homo sapiens (Hsa) Hs4505759 GI:4505759
Saccharomyces cerevisiae (Sce) YGR256w
(S000003488)		 GI:6321695 P53319
Saccharomyces cerevisiae (Sce) YHR183w
(S000001226)		 GI:6321977 P38720
Schizosaccharomyces pombe (Spo) SPBC660.16 GI:19111887 P78812
Encephalitozoon cuniculi (Ecu) ECU05g0860 GI:19173625 Q8SRX1


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0001950 plasma membrane enriched fraction C
IDA
SceS000003488
GO:0005737 cytoplasm C
IDA
SceS000001226
ISS
SpoSPBC660.16
GO:0005739 mitochondrion C
IDA
AthAt5g41670
SceS000001226
ISS
SpoSPBC660.16
GO:0005777 peroxisome C
IDA
AthAt3g02360
GO:0005829 cytosol C
IDA
SpoSPBC660.16
TAS
SceS000003488
GO:0009507 chloroplast C
IDA
AthAt5g41670
At1g64190
GO:0016020 membrane C
IDA
AthAt1g64190
GO:0004616 phosphogluconate dehydrogenase (decarboxylating)
activity		 F
IDA
SpoSPBC660.16
IMP
SceS000003488
S000001226
ISS
AthAt5g41670
At3g02360
At1g64190
GO:0050661 NADP or NADPH binding F
IDA
SpoSPBC660.16
GO:0002119 nematode larval development P
IMP
CelWBGene00012015
GO:0006414 translational elongation P
RCA
SceS000001226
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000001226
GO:0009051 pentose-phosphate shunt, oxidative
branch		 P
IDA
SpoSPBC660.16
IGI
SceS000003488
S000001226
IMP
SceS000001226
S000003488
GO:0009651 response to salt stress P
IEP
AthAt3g02360
At1g64190
GO:0009744 response to sucrose stimulus P
IEP
AthAt5g41670
GO:0009749 response to glucose stimulus P
IEP
AthAt5g41670
GO:0009750 response to fructose stimulus P
IEP
AthAt5g41670
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00012015
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00012015
GO:0033554 cellular response to stress P
IEP
SpoSPBC660.16
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000001226
GO:0046686 response to cadmium ion P
IEP
AthAt5g41670

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
68268

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) PGD GI:40068518
Canis familiaris (Cfa) PGD GI:73950940
Mus musculus (Mmu) Pgd
(MGI:97553)		 GI:124486895 Q3UAG2
Gallus gallus (Gga) PGD GI:118101110
Drosophila melanogaster (Dme) Pgd
(FBgn0004654)		 GI:24639279
Anopheles gambiae (Aga) AgaP_AGAP004197 GI:158291584
Caenorhabditis elegans (Cel) T25B9.9
(CE06508;
WBGene00012015)		 GI:17542558 Q17761
Schizosaccharomyces pombe (Spo) SPBC660.16 GI:19111887 P78812
Saccharomyces cerevisiae (Sce) GND1
(S000001226)		 GI:6321977 P38720
Saccharomyces cerevisiae (Sce) GND2
(S000003488)		 GI:6321695 P53319
Kluyveromyces lactis (Kla) KLLA0A09339g GI:50302941
Eremothecium gossypii (Ego) AGOS_AFR129W GI:45198647
Magnaporthe grisea (Mgr) MGG_00175 GI:145611724
Neurospora crassa (Ncr) NCU03100.1 GI:32420185
Arabidopsis thaliana (Ath) AT3G02360 GI:15232888
Oryza sativa (Osa) Os06g0111500 GI:115465974
Plasmodium falciparum (Pfa) PF14_0520 GI:124809822


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0001950 plasma membrane enriched fraction C
IDA
SceS000003488
GO:0005575 cellular_component C
ND
PfaPF14_0520
GO:0005625 soluble fraction C
ISO
MmuMGI:97553
GO:0005737 cytoplasm C
IDA
SceS000001226
ISS
SpoSPBC660.16
GO:0005739 mitochondrion C
IDA
SceS000001226
ISS
SpoSPBC660.16
GO:0005777 peroxisome C
IDA
AthAt3g02360
GO:0005792 microsome C
ISO
MmuMGI:97553
GO:0005829 cytosol C
IDA
SpoSPBC660.16
TAS
SceS000003488
GO:0004616 phosphogluconate dehydrogenase (decarboxylating)
activity		 F
IDA
MmuMGI:97553
SpoSPBC660.16
IMP
SceS000003488
S000001226
ISO
MmuMGI:97553
ISS
AthAt3g02360
HsaPGD
NAS
DmeFBgn0004654
TAS
DmeFBgn0004654
GO:0005515 protein binding F
IPI
HsaPGD
GO:0005529 sugar binding F
ISO
MmuMGI:97553
GO:0031406 carboxylic acid binding F
ISO
MmuMGI:97553
GO:0050661 NADP or NADPH binding F
IDA
SpoSPBC660.16
ISO
MmuMGI:97553
GO:0002119 nematode larval development P
IMP
CelWBGene00012015
GO:0005975 carbohydrate metabolic process P
ISO
MmuMGI:97553
GO:0006098 pentose-phosphate shunt P
ISO
MmuMGI:97553
ISS
HsaPGD
NAS
DmeFBgn0004654
GO:0006414 translational elongation P
RCA
SceS000001226
GO:0006739 NADP metabolic process P
ISO
MmuMGI:97553
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000001226
GO:0009051 pentose-phosphate shunt, oxidative
branch		 P
IDA
HsaPGD
SpoSPBC660.16
IGI
SceS000003488
S000001226
IMP
SceS000001226
S000003488
ISO
MmuMGI:97553
GO:0009651 response to salt stress P
IEP
AthAt3g02360
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00012015
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00012015
GO:0019322 pentose biosynthetic process P
IDA
MmuMGI:97553
GO:0019521 D-gluconate metabolic process P
ISO
MmuMGI:97553
GO:0033554 cellular response to stress P
IEP
SpoSPBC660.16
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000001226
GO:0055114 oxidation reduction P
IDA
HsaPGD

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_652

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga6714 ENSANGP00000012857
Ashbya gossypii (Ago) ago3321 AFR129W
Arabidopsis thaliana (Ath) ath5631 At1g64190.1
Arabidopsis thaliana (Ath) ath12250 At3g02360.1
Arabidopsis thaliana (Ath) ath12251 At3g02360.2
Arabidopsis thaliana (Ath) ath25950 At5g41670.1
Arabidopsis thaliana (Ath) ath25951 At5g41670.2
Caenorhabditis elegans (Cel) cel16317 T25B9.9
(CE06508;
WBGene00012015)
Candida glabrata (Cgl) cgl5237 CAGL0M13343g
Cryptococcus neoformans (Cne) cne3522 176.m02249
Dictyostelium discoideum (Ddi) ddi12310 DDB0215011
Debaryomyces hansenii (Dha) dha2599 DEHA0D06820g
Drosophila melanogaster (Dme) dme16191 CG3724-PA
(FBgn0004654)
Danio rerio (Dre) dre29827 ENSDARP00000007588
(pgd)		 Q803T9
Escherichia coli (Eco) eco1968 16129970
Encephalitozoon cuniculi (Ecu) ecu1187 19173625
Takifugu rubripes (Fru) fru1590 SINFRUP00000146059
Gallus gallus (Gga) gga12501 ENSGALP00000004417
(PGD)		 Q5ZIZ0
Gallus gallus (Gga) gga12502 ENSGALP00000004418
Homo sapiens (Hsa) hsa248 ENSP00000270776
(PGD)		 P52209
Kluyveromyces lactis (Kla) kla405 KLLA0A09339g
Mus musculus (Mmu) mmu19449 ENSMUSP00000055509
Neurospora crassa (Ncr) ncr3004 NCU03100.2
Oryza sativa (Osa) osa14465 3014.m00120
Plasmodium falciparum (Pfa) pfa1202 PF14_0520
Rattus norvegicus (Rno) rno24434 ENSRNOP00000018609
(RGD:1583832)		 P85968
Rattus norvegicus (Rno) rno24432 ENSRNOP00000038110
(RGD:1583832)
Saccharomyces cerevisiae (Sce) sce2638 YGR256W
(S000003488)
Saccharomyces cerevisiae (Sce) sce2959 YHR183W
(S000001226)
Schizosaccharomyces pombe (Spo) spo3392 SPBC660.16 P78812
Yarrowia lipolytica (Yli) yli1391 YALI0B15598g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0001950 plasma membrane enriched fraction C
IDA
SceS000003488
GO:0005575 cellular_component C
ND
PfaPF14_0520
GO:0005737 cytoplasm C
IDA
SceS000001226
ISS
SpoSPBC660.16
GO:0005739 mitochondrion C
IDA
AthAt5g41670
SceS000001226
ISS
SpoSPBC660.16
GO:0005777 peroxisome C
IDA
AthAt3g02360
GO:0005829 cytosol C
IDA
SpoSPBC660.16
TAS
SceS000003488
GO:0009507 chloroplast C
IDA
AthAt5g41670
At1g64190
GO:0016020 membrane C
IDA
AthAt1g64190
GO:0004616 phosphogluconate dehydrogenase (decarboxylating)
activity		 F
IDA
SpoSPBC660.16
IMP
SceS000003488
S000001226
ISS
AthAt5g41670
At3g02360
At1g64190
NAS
DmeFBgn0004654
TAS
DmeFBgn0004654
GO:0050661 NADP or NADPH binding F
IDA
SpoSPBC660.16
GO:0002119 nematode larval development P
IMP
CelWBGene00012015
GO:0006098 pentose-phosphate shunt P
NAS
DmeFBgn0004654
GO:0006414 translational elongation P
RCA
SceS000001226
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000001226
GO:0009051 pentose-phosphate shunt, oxidative
branch		 P
IDA
SpoSPBC660.16
IGI
SceS000003488
S000001226
IMP
SceS000001226
S000003488
GO:0009651 response to salt stress P
IEP
AthAt3g02360
At1g64190
GO:0009744 response to sucrose stimulus P
IEP
AthAt5g41670
GO:0009749 response to glucose stimulus P
IEP
AthAt5g41670
GO:0009750 response to fructose stimulus P
IEP
AthAt5g41670
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00012015
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00012015
GO:0033554 cellular response to stress P
IEP
SpoSPBC660.16
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000001226
GO:0046686 response to cadmium ion P
IEP
AthAt5g41670

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC660.16
(P78812)		 YGR256W
(S000003488)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0001950 plasma membrane enriched fraction C
IDA
SceS000003488
GO:0005737 cytoplasm C
ISS
SpoSPBC660.16
GO:0005739 mitochondrion C
ISS
SpoSPBC660.16
GO:0005829 cytosol C
IDA
SpoSPBC660.16
TAS
SceS000003488
GO:0004616 phosphogluconate dehydrogenase (decarboxylating)
activity		 F
IDA
SpoSPBC660.16
IMP
SceS000003488
GO:0050661 NADP or NADPH binding F
IDA
SpoSPBC660.16
GO:0009051 pentose-phosphate shunt, oxidative
branch		 P
IDA
SpoSPBC660.16
IGI
SceS000003488
IMP
SceS000003488
GO:0033554 cellular response to stress P
IEP
SpoSPBC660.16

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Query species:

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GO info in one table:

s.khadayate@ucl.ac.uk