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Search term: YGR261C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name APL6
SGD link S000003493
Alternative ID YGR261C
Description Beta3-like subunit of the yeast AP-3 complex; functions in transport of alkaline phosphatase to the vacuole via the alternate pathway; exists in both cytosolic and peripherally associated membrane-bound pools
Synonyms YGR261C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1060 ACDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Vesicle coat complex AP-3, beta subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g55480_2 GI:15233280
Caenorhabditis elegans (Cel) CE12722
(WBGene00000163)		 GI:17508597
Caenorhabditis elegans (Cel) CE18132 GI:17508599
Drosophila melanogaster (Dme) 7290497 GI:7290497 Q9W4K1
Homo sapiens (Hsa) Hs4501975 GI:4501975
Homo sapiens (Hsa) Hs4758760 GI:4758760
Saccharomyces cerevisiae (Sce) YGR261c
(S000003493)		 GI:6321700 P46682
Schizosaccharomyces pombe (Spo) SPAC23H3.06 GI:19114708 O13939
Arabidopsis thaliana (Ath) At3g55480_2 GI:15233280
Caenorhabditis elegans (Cel) CE12722
(WBGene00000163)		 GI:17508597
Caenorhabditis elegans (Cel) CE18132 GI:17508599
Drosophila melanogaster (Dme) 7290497 GI:7290497 Q9W4K1
Homo sapiens (Hsa) Hs4501975 GI:4501975
Homo sapiens (Hsa) Hs4758760 GI:4758760
Saccharomyces cerevisiae (Sce) YGR261c
(S000003493)		 GI:6321700 P46682
Schizosaccharomyces pombe (Spo) SPAC23H3.06 GI:19114708 O13939


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC23H3.06
GO:0005794 Golgi apparatus C
RCA
SceS000003493
GO:0005829 cytosol C
IDA
SpoSPAC23H3.06
GO:0030123 AP-3 adaptor complex C
ISS
SceS000003493
SpoSPAC23H3.06
GO:0003674 molecular_function F
ND
SceS000003493
SpoSPAC23H3.06
GO:0002119 nematode larval development P
IMP
CelWBGene00000163
GO:0006414 translational elongation P
RCA
SceS000003493
GO:0006886 intracellular protein transport P
NAS
SpoSPAC23H3.06
GO:0006896 Golgi to vacuole transport P
IMP
SceS000003493
ISS
SpoSPAC23H3.06
GO:0007040 lysosome organization P
IMP
CelWBGene00000163
GO:0009792 embryo development ending in birth or egg
hatching		 P
IGI
CelWBGene00000163
IMP
CelWBGene00000163
GO:0010171 body morphogenesis P
IMP
CelWBGene00000163
GO:0016192 vesicle-mediated transport P
RCA
SceS000003493
TAS
SceS000003493
GO:0019915 lipid storage P
IMP
CelWBGene00000163
GO:0040007 growth P
IMP
CelWBGene00000163
GO:0045184 establishment of protein localization P
RCA
SceS000003493

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
68722

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) apl6
(SPAC23H3.06)		 GI:19114708 O13939
Saccharomyces cerevisiae (Sce) APL6
(S000003493)		 GI:6321700 P46682
Kluyveromyces lactis (Kla) KLLA0A09559g GI:50302961
Eremothecium gossypii (Ego) AGOS_ADR335C GI:45188208


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC23H3.06
GO:0005794 Golgi apparatus C
RCA
SceS000003493
GO:0005829 cytosol C
IDA
SpoSPAC23H3.06
GO:0030123 AP-3 adaptor complex C
ISS
SceS000003493
SpoSPAC23H3.06
GO:0003674 molecular_function F
ND
SceS000003493
SpoSPAC23H3.06
GO:0006414 translational elongation P
RCA
SceS000003493
GO:0006886 intracellular protein transport P
NAS
SpoSPAC23H3.06
GO:0006896 Golgi to vacuole transport P
IMP
SceS000003493
ISS
SpoSPAC23H3.06
GO:0016192 vesicle-mediated transport P
RCA
SceS000003493
TAS
SceS000003493
GO:0045184 establishment of protein localization P
RCA
SceS000003493

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1156

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga5303 ENSANGP00000018229
Anopheles gambiae (Aga) aga5304 ENSANGP00000029541
Ashbya gossypii (Ago) ago2076 ADR335C
Arabidopsis thaliana (Ath) ath16930 At3g55480.1
Arabidopsis thaliana (Ath) ath16931 At3g55480.2
Caenorhabditis elegans (Cel) cel13823 R11A5.1a
(CE12722;
WBGene00000163)
Caenorhabditis elegans (Cel) cel13824 R11A5.1b
(CE18132)
Candida glabrata (Cgl) cgl1591 CAGL0F08393g
Cryptococcus neoformans (Cne) cne5689 179.m00552
Dictyostelium discoideum (Ddi) ddi3611 DDB0167983
Dictyostelium discoideum (Ddi) ddi3762 DDB0217414
Debaryomyces hansenii (Dha) dha6717 DEHA0G22814g
Drosophila melanogaster (Dme) dme16475 CG11427-PA
(FBgn0003210)
Danio rerio (Dre) dre29039 ENSDARP00000011323
Danio rerio (Dre) dre31647 ENSDARP00000017202
Takifugu rubripes (Fru) fru2587 SINFRUP00000137746
Takifugu rubripes (Fru) fru10877 SINFRUP00000161663
Takifugu rubripes (Fru) fru10878 SINFRUP00000161668
Takifugu rubripes (Fru) fru2589 SINFRUP00000165869
Takifugu rubripes (Fru) fru2588 SINFRUP00000172014
Takifugu rubripes (Fru) fru10879 SINFRUP00000174354
Gallus gallus (Gga) gga3624 ENSGALP00000003331
(AP3B2)
Gallus gallus (Gga) gga3625 ENSGALP00000003332
Gallus gallus (Gga) gga3623 ENSGALP00000003333
Gallus gallus (Gga) gga6163 ENSGALP00000006987
Gallus gallus (Gga) gga6164 ENSGALP00000006988
Homo sapiens (Hsa) hsa25426 ENSP00000255194
(AP3B1)		 O00203-1
Homo sapiens (Hsa) hsa11075 ENSP00000261722
(AP3B2)		 Q13367
Kluyveromyces lactis (Kla) kla415 KLLA0A09559g
Mus musculus (Mmu) mmu7386 ENSMUSP00000022196
(MGI:1333879)		 Q9Z1T1
Neurospora crassa (Ncr) ncr6387 NCU06569.2
Oryza sativa (Osa) osa10646 2781.m00202
Oryza sativa (Osa) osa32134 4400.m00126
Plasmodium falciparum (Pfa) pfa3096 PFF0655c
Rattus norvegicus (Rno) rno15359 ENSRNOP00000014278
(RGD:1310256)
Rattus norvegicus (Rno) rno2198 ENSRNOP00000026030
(RGD:1308950)
Saccharomyces cerevisiae (Sce) sce2643 YGR261C
(S000003493)
Schizosaccharomyces pombe (Spo) spo3925 SPAC23H3.06 O13939
Yarrowia lipolytica (Yli) yli1602 YALI0B20680g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC23H3.06
GO:0005794 Golgi apparatus C
RCA
SceS000003493
GO:0005802 trans-Golgi network C
TAS
MmuMGI:1333879
GO:0005829 cytosol C
IDA
SpoSPAC23H3.06
GO:0008021 synaptic vesicle C
TAS
DmeFBgn0003210
GO:0020011 apicoplast C
IDA
PfaPFF0655c
GO:0030123 AP-3 adaptor complex C
ISS
SceS000003493
SpoSPAC23H3.06
GO:0030135 coated vesicle C
ISS
PfaPFF0655c
TAS
DmeFBgn0003210
GO:0003674 molecular_function F
ND
SceS000003493
SpoSPAC23H3.06
GO:0002119 nematode larval development P
IMP
CelWBGene00000163
GO:0006414 translational elongation P
RCA
SceS000003493
GO:0006622 protein targeting to lysosome P
IMP
MmuMGI:1333879
GO:0006726 eye pigment biosynthetic process P
TAS
DmeFBgn0003210
GO:0006727 ommochrome biosynthetic process P
IMP
DmeFBgn0003210
GO:0006829 zinc ion transport P
TAS
MmuMGI:1333879
GO:0006886 intracellular protein transport P
NAS
SpoSPAC23H3.06
TAS
MmuMGI:1333879
GO:0006896 Golgi to vacuole transport P
IMP
SceS000003493
ISS
SpoSPAC23H3.06
GO:0006901 vesicle coating P
TAS
DmeFBgn0003210
GO:0007040 lysosome organization P
IMP
CelWBGene00000163
ISS
DmeFBgn0003210
GO:0007596 blood coagulation P
IMP
MmuMGI:1333879
GO:0008057 eye pigment granule organization P
NAS
DmeFBgn0003210
GO:0008340 determination of adult lifespan P
IMP
DmeFBgn0003210
GO:0009792 embryo development ending in birth or egg
hatching		 P
IGI
CelWBGene00000163
IMP
CelWBGene00000163
GO:0010171 body morphogenesis P
IMP
CelWBGene00000163
GO:0016183 synaptic vesicle coating P
TAS
DmeFBgn0003210
GO:0016192 vesicle-mediated transport P
ISS
PfaPFF0655c
NAS
DmeFBgn0003210
RCA
SceS000003493
TAS
MmuMGI:1333879
SceS000003493
GO:0019882 antigen processing and presentation P
IMP
MmuMGI:1333879
GO:0019915 lipid storage P
IMP
CelWBGene00000163
GO:0031396 regulation of protein ubiquitination P
IMP
DmeFBgn0003210
GO:0040007 growth P
IMP
CelWBGene00000163
GO:0045184 establishment of protein localization P
RCA
SceS000003493
GO:0046907 intracellular transport P
TAS
DmeFBgn0003210
GO:0048007 antigen processing and presentation, exogenous
lipid antigen via MHC class Ib		 P
IMP
MmuMGI:1333879
GO:0051138 positive regulation of NK T cell
differentiation		 P
IMP
MmuMGI:1333879

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC23H3.06
(O13939)		 YGR261C
(S000003493)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC23H3.06
GO:0005794 Golgi apparatus C
RCA
SceS000003493
GO:0005829 cytosol C
IDA
SpoSPAC23H3.06
GO:0030123 AP-3 adaptor complex C
ISS
SceS000003493
SpoSPAC23H3.06
GO:0003674 molecular_function F
ND
SceS000003493
SpoSPAC23H3.06
GO:0006414 translational elongation P
RCA
SceS000003493
GO:0006886 intracellular protein transport P
NAS
SpoSPAC23H3.06
GO:0006896 Golgi to vacuole transport P
IMP
SceS000003493
ISS
SpoSPAC23H3.06
GO:0016192 vesicle-mediated transport P
RCA
SceS000003493
TAS
SceS000003493
GO:0045184 establishment of protein localization P
RCA
SceS000003493

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Search for gene by ID or name:

Query species:

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Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk