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Search term: YGR278W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CWC22
SGD link S000003510
Alternative ID YGR278W
Description Essential protein, component of a complex containing Cef1p, has similarity to S. pombe Cwf22p; putative spliceosomal component, based on computational analysis of large-scale protein-protein interaction data
Synonyms YGR278W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2140 AC-HYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g80930 GI:15220892
Caenorhabditis elegans (Cel) CE17753
(WBGene00002957)
GI:17533631 Q17336
Homo sapiens (Hsa) Hs20536216 GI:20536216
Saccharomyces cerevisiae (Sce) YGR278w
(S000003510)
GI:6321717 P53333
Schizosaccharomyces pombe (Spo) SPBC13E7.01 GI:19113048 Q9P6R9


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IDA
CelWBGene00002957
GO:0005634 nucleus C
IDA
AthAt1g80930
CelWBGene00002957
GO:0005654 nucleoplasm C
IDA
CelWBGene00002957
GO:0005681 spliceosomal complex C
ISS
SpoSPBC13E7.01
GO:0005684 U2-type spliceosomal complex C
IDA
SceS000003510
GO:0005829 cytosol C
IDA
AthAt1g80930
GO:0043073 germ cell nucleus C
IDA
CelWBGene00002957
GO:0003674 molecular_function F
ND
SceS000003510
SpoSPBC13E7.01
GO:0003723 RNA binding F
ISS
AthAt1g80930
GO:0000003 reproduction P
IMP
CelWBGene00002957
GO:0000398 nuclear mRNA splicing, via spliceosome P
IC
SceS000003510
ISS
SpoSPBC13E7.01
GO:0002119 nematode larval development P
IMP
CelWBGene00002957
GO:0006412 translation P
ISS
AthAt1g80930
GO:0007369 gastrulation P
IMP
CelWBGene00002957
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00002957
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle
P
IMP
CelWBGene00002957
GO:0030154 cell differentiation P
IMP
CelWBGene00002957
GO:0040007 growth P
IMP
CelWBGene00002957
GO:0042078 germ-line stem cell division P
IMP
CelWBGene00002957

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
99755

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) CWC22
(S000003510)
GI:6321717 P53333
Kluyveromyces lactis (Kla) KLLA0C14025g GI:50305733
Eremothecium gossypii (Ego) AGOS_AGL355W GI:45200742


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005684 U2-type spliceosomal complex C
IDA
SceS000003510
GO:0003674 molecular_function F
ND
SceS000003510
GO:0000398 nuclear mRNA splicing, via spliceosome P
IC
SceS000003510

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1083

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga9808 ENSANGP00000007281
Ashbya gossypii (Ago) ago3957 AGL355W
Arabidopsis thaliana (Ath) ath7484 At1g80930.1
Caenorhabditis elegans (Cel) cel7959 F33A8.1
(CE17753;
WBGene00002957)
Candida glabrata (Cgl) cgl1640 CAGL0G00330g
Cryptococcus neoformans (Cne) cne1303 180.m00248
Dictyostelium discoideum (Ddi) ddi271 DDB0189551
Debaryomyces hansenii (Dha) dha2040 DEHA0C13827g
Drosophila melanogaster (Dme) dme2827 CG12750-PA
(FBgn0032678)
Danio rerio (Dre) dre24012 ENSDARP00000011469
Danio rerio (Dre) dre24010 ENSDARP00000042143
Danio rerio (Dre) dre24011 ENSDARP00000044384
Takifugu rubripes (Fru) fru28655 SINFRUP00000135745
Takifugu rubripes (Fru) fru28654 SINFRUP00000169390
Gallus gallus (Gga) gga21430 ENSGALP00000014627
(RCJMB04_12b15)
Q5ZKA3
Gallus gallus (Gga) gga21431 ENSGALP00000014628
Gallus gallus (Gga) gga21429 ENSGALP00000014630
Homo sapiens (Hsa) hsa18952 ENSP00000295749
(CWC22)
B7WP27
Kluyveromyces lactis (Kla) kla1826 KLLA0C14025g
Mus musculus (Mmu) mmu14842 ENSMUSP00000064947
(MGI:2136773)
Q8C5N3-1
Mus musculus (Mmu) mmu14876 ENSMUSP00000072278
Mus musculus (Mmu) mmu14872 ENSMUSP00000075002
Mus musculus (Mmu) mmu14879 ENSMUSP00000075784
Mus musculus (Mmu) mmu14880 ENSMUSP00000076962
Mus musculus (Mmu) mmu14881 ENSMUSP00000078983
Mus musculus (Mmu) mmu14882 ENSMUSP00000079094
Mus musculus (Mmu) mmu14874 ENSMUSP00000079535
Mus musculus (Mmu) mmu14883 ENSMUSP00000080247
Mus musculus (Mmu) mmu14875 ENSMUSP00000080841
Neurospora crassa (Ncr) ncr64 NCU00066.2
Oryza sativa (Osa) osa43012 5285.m00161
Oryza sativa (Osa) osa70368 7140.m00180
Plasmodium falciparum (Pfa) pfa5154 PFL1855w
Rattus norvegicus (Rno) rno18860 ENSRNOP00000017043
(RGD:1565385)
Rattus norvegicus (Rno) rno25351 ENSRNOP00000036987
(RGD:1562981)
Q7TP30
Saccharomyces cerevisiae (Sce) sce2662 YGR278W
(S000003510)
Schizosaccharomyces pombe (Spo) spo842 SPBC13E7.01 Q9P6R9
Yarrowia lipolytica (Yli) yli3575 YALI0D20790g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IDA
CelWBGene00002957
GO:0005575 cellular_component C
ND
MmuMGI:2136773
PfaPFL1855w
GO:0005634 nucleus C
IDA
AthAt1g80930
CelWBGene00002957
GO:0005654 nucleoplasm C
IDA
CelWBGene00002957
GO:0005681 spliceosomal complex C
ISS
SpoSPBC13E7.01
GO:0005684 U2-type spliceosomal complex C
IDA
SceS000003510
GO:0005829 cytosol C
IDA
AthAt1g80930
GO:0043073 germ cell nucleus C
IDA
CelWBGene00002957
GO:0003674 molecular_function F
ND
MmuMGI:2136773
SceS000003510
SpoSPBC13E7.01
GO:0003723 RNA binding F
ISS
AthAt1g80930
GO:0000003 reproduction P
IMP
CelWBGene00002957
GO:0000398 nuclear mRNA splicing, via spliceosome P
IC
SceS000003510
ISS
SpoSPBC13E7.01
GO:0002119 nematode larval development P
IMP
CelWBGene00002957
GO:0006412 translation P
ISS
AthAt1g80930
GO:0007369 gastrulation P
IMP
CelWBGene00002957
GO:0008150 biological_process P
ND
MmuMGI:2136773
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00002957
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle
P
IMP
CelWBGene00002957
GO:0030154 cell differentiation P
IMP
CelWBGene00002957
GO:0040007 growth P
IMP
CelWBGene00002957
GO:0042078 germ-line stem cell division P
IMP
CelWBGene00002957
GO:0051726 regulation of cell cycle P
ISS
PfaPFL1855w

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC13E7.01
(Q9P6R9)
YGR278W
(S000003510)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005681 spliceosomal complex C
ISS
SpoSPBC13E7.01
GO:0005684 U2-type spliceosomal complex C
IDA
SceS000003510
GO:0003674 molecular_function F
ND
SceS000003510
SpoSPBC13E7.01
GO:0000398 nuclear mRNA splicing, via spliceosome P
IC
SceS000003510
ISS
SpoSPBC13E7.01

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GO info in one table:

s.khadayate@ucl.ac.uk