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Search term: YHR018C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ARG4
SGD link S000001060
Alternative ID YHR018C
Description Argininosuccinate lyase, catalyzes the final step in the arginine biosynthesis pathway
Synonyms YHR018C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1316 A-DHYP-

KOGs classification KOGs description
METABOLISM Argininosuccinate lyase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g10920 GI:15238899
Drosophila melanogaster (Dme) 7297464 GI:7297464
Homo sapiens (Hsa) Hs22046560 GI:22046560
Homo sapiens (Hsa) Hs4502257 GI:4502257
Saccharomyces cerevisiae (Sce) YHR018c
(S000001060)		 GI:6321806 P04076
Schizosaccharomyces pombe (Spo) SPBC1539.03c GI:19113609 P50514
Schizosaccharomyces pombe (Spo) SPBC1773.14 GI:19111921 P40369


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SceS000001060
SpoSPBC1773.14
SPBC1539.03c
ISS
SpoSPBC1773.14
SPBC1539.03c
GO:0009507 chloroplast C
IDA
AthAt5g10920
GO:0009570 chloroplast stroma C
IDA
AthAt5g10920
GO:0004056 argininosuccinate lyase activity F
IDA
SceS000001060
ISS
AthAt5g10920
SpoSPBC1539.03c
SPBC1773.14
GO:0006082 organic acid metabolic process P
RCA
SceS000001060
GO:0006414 translational elongation P
RCA
SceS000001060
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000001060
GO:0006526 arginine biosynthetic process P
IMP
SceS000001060
ISS
SpoSPBC1773.14
SPBC1539.03c
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000001060
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000001060

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
32

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) ASL GI:68303542
Pan troglodytes (Ptr) ASL GI:114613790
Canis familiaris (Cfa) ASL GI:73957609
Mus musculus (Mmu) Asl
(MGI:88084)		 GI:19526986 Q3UUH0
Rattus norvegicus (Rno) Asl
(RGD:619974)		 GI:31377525
Gallus gallus (Gga) ASL GI:118100139
Gallus gallus (Gga) ASL GI:45382827
Drosophila melanogaster (Dme) CG9510
(FBgn0032076)		 GI:24582947
Anopheles gambiae (Aga) AgaP_AGAP008141 GI:158297014
Schizosaccharomyces pombe (Spo) SPBC1539.03c GI:19113609 P50514
Schizosaccharomyces pombe (Spo) arg7
(SPBC1773.14)		 GI:19111921 P40369
Saccharomyces cerevisiae (Sce) ARG4
(S000001060)		 GI:6321806 P04076
Kluyveromyces lactis (Kla) KLLA0A08404g GI:50302867
Eremothecium gossypii (Ego) AGOS_AEL019W GI:45190588
Magnaporthe grisea (Mgr) MGG_09712 GI:39963199
Neurospora crassa (Ncr) NCU08162.1 GI:32416780
Arabidopsis thaliana (Ath) AT5G10920 GI:15238899
Oryza sativa (Osa) Os03g0305500 GI:115452565


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
ISO
MmuMGI:88084
GO:0005737 cytoplasm C
ISO
MmuMGI:88084
TAS
HsaASL
GO:0005741 mitochondrial outer membrane C
ISO
MmuMGI:88084
GO:0005829 cytosol C
IDA
SceS000001060
SpoSPBC1773.14
SPBC1539.03c
ISS
SpoSPBC1773.14
SPBC1539.03c
GO:0009507 chloroplast C
IDA
AthAt5g10920
GO:0009570 chloroplast stroma C
IDA
AthAt5g10920
GO:0043204 perikaryon C
ISO
MmuMGI:88084
GO:0004056 argininosuccinate lyase activity F
IDA
SceS000001060
ISO
MmuMGI:88084
ISS
AthAt5g10920
DmeFBgn0032076
SpoSPBC1539.03c
SPBC1773.14
GO:0000050 urea cycle P
ISO
MmuMGI:88084
GO:0000053 argininosuccinate metabolic process P
ISO
MmuMGI:88084
GO:0001889 liver development P
ISO
MmuMGI:88084
GO:0006082 organic acid metabolic process P
RCA
SceS000001060
GO:0006414 translational elongation P
RCA
SceS000001060
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000001060
GO:0006520 cellular amino acid metabolic process P
IMP
MmuMGI:88084
GO:0006526 arginine biosynthetic process P
IMP
SceS000001060
ISS
SpoSPBC1773.14
SPBC1539.03c
GO:0006527 arginine catabolic process P
TAS
HsaASL
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000001060
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000001060
GO:0007626 locomotory behavior P
IMP
MmuMGI:88084
GO:0009791 post-embryonic development P
IMP
MmuMGI:88084
GO:0019676 ammonia assimilation cycle P
IMP
MmuMGI:88084

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1475

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga10119 ENSANGP00000006856
Ashbya gossypii (Ago) ago2487 AEL019W
Arabidopsis thaliana (Ath) ath23298 At5g10920.1
Candida glabrata (Cgl) cgl2908 CAGL0I08987g
Cryptococcus neoformans (Cne) cne5526 179.m00379
Debaryomyces hansenii (Dha) dha2078 DEHA0C14674g
Drosophila melanogaster (Dme) dme1530 CG33085-PA
Drosophila melanogaster (Dme) dme1532 CG33085-PD
Danio rerio (Dre) dre13753 ENSDARP00000040189
(zgc:63532)		 Q7SY44
Danio rerio (Dre) dre13752 ENSDARP00000046781
Escherichia coli (Eco) eco3816 16131798
Takifugu rubripes (Fru) fru539 SINFRUP00000148426
Gallus gallus (Gga) gga8825 ENSGALP00000004034
(ASL)
Gallus gallus (Gga) gga8826 ENSGALP00000004053
(ASL)		 P05083
Homo sapiens (Hsa) hsa28693 ENSP00000307188
(ASL)		 P04424
Homo sapiens (Hsa) hsa28692 ENSP00000354710
(ASL)		 C9JGX0
Kluyveromyces lactis (Kla) kla368 KLLA0A08404g
Mus musculus (Mmu) mmu21010 ENSMUSP00000026610
(MGI:88084)		 Q91YI0
Neurospora crassa (Ncr) ncr7954 NCU08162.2
Oryza sativa (Osa) osa59966 6368.m00090
Rattus norvegicus (Rno) rno8457 ENSRNOP00000001211
(RGD:619974)		 Q4QRB8
Saccharomyces cerevisiae (Sce) sce2764 YHR018C
(S000001060)
Schizosaccharomyces pombe (Spo) spo1727 SPBC1539.03c P50514
Schizosaccharomyces pombe (Spo) spo4457 SPBC1773.14 P40369
Yarrowia lipolytica (Yli) yli3815 YALI0D26367g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
ISO
MmuMGI:88084
GO:0005737 cytoplasm C
ISO
MmuMGI:88084
GO:0005741 mitochondrial outer membrane C
ISO
MmuMGI:88084
GO:0005829 cytosol C
IDA
SceS000001060
SpoSPBC1773.14
SPBC1539.03c
ISS
SpoSPBC1773.14
SPBC1539.03c
GO:0009507 chloroplast C
IDA
AthAt5g10920
GO:0009570 chloroplast stroma C
IDA
AthAt5g10920
GO:0043204 perikaryon C
ISO
MmuMGI:88084
GO:0004056 argininosuccinate lyase activity F
IDA
SceS000001060
ISO
MmuMGI:88084
ISS
AthAt5g10920
SpoSPBC1539.03c
SPBC1773.14
GO:0000050 urea cycle P
ISO
MmuMGI:88084
GO:0000053 argininosuccinate metabolic process P
ISO
MmuMGI:88084
GO:0001889 liver development P
ISO
MmuMGI:88084
GO:0006082 organic acid metabolic process P
RCA
SceS000001060
GO:0006414 translational elongation P
RCA
SceS000001060
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000001060
GO:0006520 cellular amino acid metabolic process P
IMP
MmuMGI:88084
GO:0006526 arginine biosynthetic process P
IMP
SceS000001060
ISS
SpoSPBC1773.14
SPBC1539.03c
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000001060
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000001060
GO:0007626 locomotory behavior P
IMP
MmuMGI:88084
GO:0009791 post-embryonic development P
IMP
MmuMGI:88084
GO:0019676 ammonia assimilation cycle P
IMP
MmuMGI:88084

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC1539.03c
(P50514)		 YHR018C
(S000001060)
SPBC1773.14
(P40369)		 YHR018C
(S000001060)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SceS000001060
SpoSPBC1773.14
SPBC1539.03c
ISS
SpoSPBC1773.14
SPBC1539.03c
GO:0004056 argininosuccinate lyase activity F
IDA
SceS000001060
ISS
SpoSPBC1539.03c
SPBC1773.14
GO:0006082 organic acid metabolic process P
RCA
SceS000001060
GO:0006414 translational elongation P
RCA
SceS000001060
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000001060
GO:0006526 arginine biosynthetic process P
IMP
SceS000001060
ISS
SpoSPBC1773.14
SPBC1539.03c
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000001060
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000001060

Back to the top
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Query species:

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GO info in one table:

s.khadayate@ucl.ac.uk