YOGY Home YOGY Help

Search term: YHR021C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPS27B
SGD link S000001063
Alternative ID YHR021C
Description Protein component of the small (40S) ribosomal subunit; nearly identical to Rps27Ap and has similarity to rat S27 ribosomal protein
Synonyms YHR021C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1779 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 40s ribosomal protein S27

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g45710 GI:15225550
Arabidopsis thaliana (Ath) At3g61110 GI:15233044
Arabidopsis thaliana (Ath) At5g47930 GI:15238845
Caenorhabditis elegans (Cel) CE19904
(WBGene00004496)		 GI:17563244 Q9TXP0
Drosophila melanogaster (Dme) 7301299 GI:7301299
Homo sapiens (Hsa) Hs18555322 GI:18555322
Homo sapiens (Hsa) Hs18576392 GI:18576392
Homo sapiens (Hsa) Hs22055385 GI:22055385
Homo sapiens (Hsa) Hs22059251 GI:22059251
Homo sapiens (Hsa) Hs22063207 GI:22063207
Homo sapiens (Hsa) Hs4506711
(RPS27)		 GI:4506711 P42677
Homo sapiens (Hsa) Hs7705706
(RPS27L)		 GI:7705706 Q71UM5
Saccharomyces cerevisiae (Sce) YHR021c
(S000001063)		 GI:6321809 P38711
Saccharomyces cerevisiae (Sce) YKL156w
(S000001639)		 GI:6322693 P35997
Schizosaccharomyces pombe (Spo) SPBC1685.10 GI:19112006 O74330
Encephalitozoon cuniculi (Ecu) ECU04g1015 GI:19074179 Q8SS34


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt3g61110
GO:0005634 nucleus C
IDA
HsaRPS27L
RPS27
GO:0005730 nucleolus C
IDA
AthAt2g45710
GO:0005737 cytoplasm C
IDA
SceS000001639
GO:0005829 cytosol C
EXP
HsaRPS27
IDA
SpoSPBC1685.10
GO:0005840 ribosome C
ISS
AthAt3g61110
At2g45710
At5g47930
NAS
HsaRPS27
GO:0005886 plasma membrane C
IDA
AthAt2g45710
At5g47930
GO:0022626 cytosolic ribosome C
IDA
AthAt2g45710
At3g61110
At5g47930
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt3g61110
At5g47930
At2g45710
HsaRPS27
SceS000001639
S000001063
ISS
SpoSPBC1685.10
GO:0003677 DNA binding F
NAS
HsaRPS27
GO:0003735 structural constituent of ribosome F
IDA
SceS000001063
S000001639
ISS
AthAt5g47930
At3g61110
At2g45710
SpoSPBC1685.10
GO:0008270 zinc ion binding F
NAS
HsaRPS27
GO:0008494 translation activator activity F
IDA
HsaRPS27L
GO:0008656 caspase activator activity F
IDA
HsaRPS27L
GO:0000003 reproduction P
IMP
CelWBGene00004496
GO:0000028 ribosomal small subunit assembly P
IMP
SceS000001639
S000001063
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IGI
SceS000001063
S000001639
GO:0000479 endonucleolytic cleavage of tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001063
GO:0002119 nematode larval development P
IMP
CelWBGene00004496
GO:0006281 DNA repair P
IMP
HsaRPS27L
GO:0006412 translation P
IC
HsaRPS27
SceS000001639
S000001063
IDA
HsaRPS27L
ISS
AthAt5g47930
At3g61110
At2g45710
SpoSPBC1685.10
NAS
HsaRPS27
GO:0006414 translational elongation P
EXP
HsaRPS27
GO:0006974 response to DNA damage stimulus P
IDA
HsaRPS27L
GO:0008283 cell proliferation P
NAS
HsaRPS27
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004496
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004496
GO:0031571 G1/S DNA damage checkpoint P
IMP
HsaRPS27L
GO:0040007 growth P
IMP
CelWBGene00004496
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004496
GO:0042254 ribosome biogenesis P
ISS
AthAt5g47930
At3g61110
At2g45710
SpoSPBC1685.10
GO:0042771 DNA damage response, signal transduction by p53
class mediator resulting in induction of
apoptosis		 P
IDA
HsaRPS27L
GO:0045768 positive regulation of anti-apoptosis P
IMP
HsaRPS27L

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
803

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPS27 GI:4506711 P42677
Pan troglodytes (Ptr) RPS27L GI:114636179
Canis familiaris (Cfa) RPS27 GI:73994931
Mus musculus (Mmu) Rps27
(MGI:1888676)		 GI:26024336 Q6ZWU9
Mus musculus (Mmu) Gm9846 GI:149260404
Rattus norvegicus (Rno) Rps27
(RGD:621045)		 GI:16758382
Drosophila melanogaster (Dme) RpS27
(FBgn0039300)		 GI:24649976
Anopheles gambiae (Aga) AgaP_AGAP007157 GI:31199327
Caenorhabditis elegans (Cel) rps-27
(CE19904;
WBGene00004496)		 GI:17563244 Q9TXP0
Schizosaccharomyces pombe (Spo) rps27
(SPBC1685.10)		 GI:19112006 O74330
Saccharomyces cerevisiae (Sce) RPS27B
(S000001063)		 GI:6321809 P38711
Saccharomyces cerevisiae (Sce) RPS27A
(S000001639)		 GI:6322693 P35997
Kluyveromyces lactis (Kla) KLLA0E11704g GI:50308943
Eremothecium gossypii (Ego) AGOS_ACR065C GI:45185751
Magnaporthe grisea (Mgr) MGG_02872 GI:39970811
Neurospora crassa (Ncr) NCU00618.1 GI:32408635
Arabidopsis thaliana (Ath) ARS27A GI:15233044
Arabidopsis thaliana (Ath) AT2G45710 GI:15225550
Arabidopsis thaliana (Ath) AT5G47930 GI:15238845
Oryza sativa (Osa) Os04g0346100 GI:115457824
Oryza sativa (Osa) Os02g0478700 GI:115446135
Plasmodium falciparum (Pfa) PF13_0045 GI:124512908


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthARS27A
GO:0005634 nucleus C
IDA
HsaRPS27
GO:0005730 nucleolus C
IDA
AthAt2g45710
GO:0005737 cytoplasm C
IDA
SceS000001639
GO:0005811 lipid particle C
IDA
DmeFBgn0039300
GO:0005829 cytosol C
EXP
HsaRPS27
IDA
SpoSPBC1685.10
GO:0005840 ribosome C
ISS
AthAt2g45710
ARS27A
At5g47930
NAS
HsaRPS27
GO:0005886 plasma membrane C
IDA
AthAt2g45710
At5g47930
GO:0022626 cytosolic ribosome C
IDA
AthAt2g45710
ARS27A
At5g47930
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthARS27A
At5g47930
At2g45710
HsaRPS27
SceS000001639
S000001063
ISO
MmuMGI:1888676
ISS
DmeFBgn0039300
PfaPF13_0045
SpoSPBC1685.10
GO:0003677 DNA binding F
NAS
HsaRPS27
GO:0003735 structural constituent of ribosome F
IDA
SceS000001063
S000001639
ISO
MmuMGI:1888676
ISS
AthARS27A
At5g47930
At2g45710
DmeFBgn0039300
SpoSPBC1685.10
GO:0005515 protein binding F
IPI
MmuMGI:1888676
GO:0008270 zinc ion binding F
NAS
HsaRPS27
GO:0000003 reproduction P
IMP
CelWBGene00004496
GO:0000028 ribosomal small subunit assembly P
IMP
SceS000001639
S000001063
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IGI
SceS000001063
S000001639
GO:0000479 endonucleolytic cleavage of tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001063
GO:0002119 nematode larval development P
IMP
CelWBGene00004496
GO:0006412 translation P
IC
HsaRPS27
SceS000001639
S000001063
ISS
AthARS27A
At5g47930
At2g45710
SpoSPBC1685.10
NAS
HsaRPS27
GO:0006414 translational elongation P
EXP
HsaRPS27
GO:0008283 cell proliferation P
NAS
HsaRPS27
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004496
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004496
GO:0040007 growth P
IMP
CelWBGene00004496
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004496
GO:0042254 ribosome biogenesis P
ISS
AthARS27A
At5g47930
At2g45710
SpoSPBC1685.10

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_612

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga2608 ENSANGP00000019453
Ashbya gossypii (Ago) ago1112 ACR065C
Arabidopsis thaliana (Ath) ath11795 At2g45710.1
Arabidopsis thaliana (Ath) ath17547 At3g61110.1
Arabidopsis thaliana (Ath) ath26682 At5g47930.1
Caenorhabditis elegans (Cel) cel10620 F56E10.4
(CE19904;
WBGene00004496)
Candida glabrata (Cgl) cgl3025 CAGL0J00737g
Cryptococcus neoformans (Cne) cne4361 177.m03114
Dictyostelium discoideum (Ddi) ddi12618 DDB0231065
Debaryomyces hansenii (Dha) dha3430 DEHA0E04378g
Debaryomyces hansenii (Dha) dha3614 DEHA0E08437g
Drosophila melanogaster (Dme) dme14402 CG10423-PA
(FBgn0039300)
Danio rerio (Dre) dre7299 ENSDARP00000029079
Encephalitozoon cuniculi (Ecu) ecu817 19074179
Takifugu rubripes (Fru) fru27053 SINFRUP00000129243
Takifugu rubripes (Fru) fru31347 SINFRUP00000131516
Takifugu rubripes (Fru) fru32030 SINFRUP00000165495
Gallus gallus (Gga) gga3751 ENSGALP00000005518
Gallus gallus (Gga) gga25714 ENSGALP00000028062
Gallus gallus (Gga) gga25715 ENSGALP00000028063
Gallus gallus (Gga) gga25716 ENSGALP00000028064
Homo sapiens (Hsa) hsa2864 ENSP00000241656
Homo sapiens (Hsa) hsa6915 ENSP00000252325
Homo sapiens (Hsa) hsa22292 ENSP00000301828
Homo sapiens (Hsa) hsa2117 ENSP00000314461
Homo sapiens (Hsa) hsa10748 ENSP00000331019
(RPS27L)		 Q71UM5
Homo sapiens (Hsa) hsa28971 ENSP00000348653
Homo sapiens (Hsa) hsa872 ENSP00000354502
Kluyveromyces lactis (Kla) kla3476 KLLA0E11704g
Mus musculus (Mmu) mmu27857 ENSMUSP00000046016
(MGI:1915191)		 Q6ZWY3
Mus musculus (Mmu) mmu28426 ENSMUSP00000060523
(MGI:1888676)		 Q6ZWU9
Neurospora crassa (Ncr) ncr599 NCU00618.2
Oryza sativa (Osa) osa38001 4884.m00189
Oryza sativa (Osa) osa83997 8305.m00165
Plasmodium falciparum (Pfa) pfa4149 PF13_0045
Rattus norvegicus (Rno) rno16456 ENSRNOP00000022897
(RGD:621045)		 Q71TY3
Saccharomyces cerevisiae (Sce) sce2767 YHR021C
(S000001063)
Saccharomyces cerevisiae (Sce) sce3829 YKL156W
(S000001639)
Schizosaccharomyces pombe (Spo) spo1129 SPBC1685.10 O74330


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1915191
GO:0005618 cell wall C
IDA
AthAt3g61110
GO:0005730 nucleolus C
IDA
AthAt2g45710
GO:0005737 cytoplasm C
IDA
SceS000001639
GO:0005811 lipid particle C
IDA
DmeFBgn0039300
GO:0005829 cytosol C
IDA
SpoSPBC1685.10
GO:0005840 ribosome C
ISS
AthAt3g61110
At2g45710
At5g47930
GO:0005886 plasma membrane C
IDA
AthAt2g45710
At5g47930
GO:0022626 cytosolic ribosome C
IDA
AthAt2g45710
At3g61110
At5g47930
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt3g61110
At5g47930
At2g45710
SceS000001639
S000001063
ISO
MmuMGI:1888676
ISS
DmeFBgn0039300
PfaPF13_0045
SpoSPBC1685.10
GO:0003674 molecular_function F
ND
MmuMGI:1915191
GO:0003735 structural constituent of ribosome F
IDA
SceS000001063
S000001639
ISO
MmuMGI:1888676
ISS
AthAt5g47930
At3g61110
At2g45710
DmeFBgn0039300
SpoSPBC1685.10
GO:0005515 protein binding F
IPI
MmuMGI:1888676
GO:0000003 reproduction P
IMP
CelWBGene00004496
GO:0000028 ribosomal small subunit assembly P
IMP
SceS000001639
S000001063
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IGI
SceS000001063
S000001639
GO:0000479 endonucleolytic cleavage of tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001063
GO:0002119 nematode larval development P
IMP
CelWBGene00004496
GO:0006412 translation P
IC
SceS000001639
S000001063
ISS
AthAt5g47930
At3g61110
At2g45710
SpoSPBC1685.10
GO:0008150 biological_process P
ND
MmuMGI:1915191
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004496
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004496
GO:0040007 growth P
IMP
CelWBGene00004496
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004496
GO:0042254 ribosome biogenesis P
ISS
AthAt5g47930
At3g61110
At2g45710
SpoSPBC1685.10

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC1685.10
(O74330)		 YHR021C
(S000001063)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPBC1685.10
GO:0022627 cytosolic small ribosomal subunit C
IDA
SceS000001063
ISS
SpoSPBC1685.10
GO:0003735 structural constituent of ribosome F
IDA
SceS000001063
ISS
SpoSPBC1685.10
GO:0000028 ribosomal small subunit assembly P
IMP
SceS000001063
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IGI
SceS000001063
GO:0000479 endonucleolytic cleavage of tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001063
GO:0006412 translation P
IC
SceS000001063
ISS
SpoSPBC1685.10
GO:0042254 ribosome biogenesis P
ISS
SpoSPBC1685.10

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk