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Search term: YHR027C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPN1
SGD link S000001069
Alternative ID YHR027C
Description Non-ATPase base subunit of the 19S regulatory particle of the 26S proteasome; may participate in the recognition of several ligands of the proteasome; contains a leucine-rich repeat (LRR) domain, a site for protein-protein interactions
Synonyms YHR027C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2005 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING 26S proteasome regulatory complex, subunit RPN1/PSMD2

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g20580 GI:15225379
Arabidopsis thaliana (Ath) At4g08140 GI:15236408
Arabidopsis thaliana (Ath) At4g28470 GI:15235308
Caenorhabditis elegans (Cel) CE17253
(WBGene00004458)
GI:17542008 Q9GZH5
Drosophila melanogaster (Dme) 7293726 GI:7293726
Homo sapiens (Hsa) Hs20149522 GI:20149522
Saccharomyces cerevisiae (Sce) YHR027c
(S000001069)
GI:6321816 P38764
Schizosaccharomyces pombe (Spo) SPBP19A11.03c GI:19112963 P87048
Encephalitozoon cuniculi (Ecu) ECU04g0310 GI:19074108 Q8SS65


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt4g08140
GO:0005634 nucleus C
IDA
SceS000001069
SpoSPBP19A11.03c
TAS
AthAt2g20580
SpoSPBP19A11.03c
GO:0005737 cytoplasm C
IDA
SceS000001069
GO:0005783 endoplasmic reticulum C
IDA
SceS000001069
GO:0005829 cytosol C
IDA
SpoSPBP19A11.03c
GO:0005886 plasma membrane C
IDA
AthAt2g20580
GO:0008540 proteasome regulatory particle, base
subcomplex
C
IDA
AthAt2g20580
SceS000001069
ISS
AthAt2g20580
SpoSPBP19A11.03c
TAS
AthAt4g28470
GO:0034515 proteasome storage granule C
IDA
SceS000001069
GO:0003674 molecular_function F
ND
AthAt4g08140
GO:0004175 endopeptidase activity F
ISS
SpoSPBP19A11.03c
TAS
SceS000001069
GO:0005515 protein binding F
IPI
SpoSPBP19A11.03c
GO:0030674 protein binding, bridging F
IPI
SceS000001069
GO:0000003 reproduction P
IMP
CelWBGene00004458
GO:0000278 mitotic cell cycle P
IC
SpoSPBP19A11.03c
GO:0002119 nematode larval development P
IMP
CelWBGene00004458
GO:0006508 proteolysis P
RCA
SceS000001069
GO:0006511 ubiquitin-dependent protein catabolic
process
P
TAS
AthAt2g20580
SceS000001069
GO:0007346 regulation of mitotic cell cycle P
NAS
SpoSPBP19A11.03c
GO:0008150 biological_process P
ND
AthAt4g08140
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004458
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004458
GO:0030163 protein catabolic process P
TAS
AthAt4g28470
At2g20580
GO:0040007 growth P
IMP
CelWBGene00004458
GO:0043161 proteasomal ubiquitin-dependent protein catabolic
process
P
IGI
SpoSPBP19A11.03c
GO:0043623 cellular protein complex assembly P
RCA
SceS000001069
GO:0051726 regulation of cell cycle P
IMP
AthAt2g20580

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
2101

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) PSMD2 GI:25777602
Pan troglodytes (Ptr) PSMD2 GI:114590784
Canis familiaris (Cfa) PSMD2 GI:74003415
Mus musculus (Mmu) Psmd2
(MGI:1096584)
GI:19882201 Q3TI61
Rattus norvegicus (Rno) Psmd2
(RGD:1305752)
GI:72255509
Gallus gallus (Gga) PSMD2 GI:61098410
Drosophila melanogaster (Dme) Rpn1
(FBgn0028695)
GI:21356859
Anopheles gambiae (Aga) AgaP_AGAP002481 GI:57969616
Caenorhabditis elegans (Cel) rpn-1
(CE17253;
WBGene00004458)
GI:17542008 Q9GZH5
Schizosaccharomyces pombe (Spo) mts4
(SPBP19A11.03c)
GI:19112963 P87048
Saccharomyces cerevisiae (Sce) RPN1
(S000001069)
GI:6321816 P38764
Kluyveromyces lactis (Kla) KLLA0E11484g GI:50308927
Eremothecium gossypii (Ego) AGOS_ACR072C GI:45185758
Magnaporthe grisea (Mgr) MGG_07120 GI:145612425
Neurospora crassa (Ncr) NCU07721.1 GI:32415898
Arabidopsis thaliana (Ath) RPN1A GI:18399399
Arabidopsis thaliana (Ath) RPN1B GI:79487972
Oryza sativa (Osa) Os02g0146700 GI:115444199
Oryza sativa (Osa) Os09g0326800 GI:115478581
Plasmodium falciparum (Pfa) PFB0260w GI:124800972


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1096584
GO:0005634 nucleus C
IDA
SceS000001069
SpoSPBP19A11.03c
TAS
AthRPN1A
SpoSPBP19A11.03c
GO:0005737 cytoplasm C
IDA
SceS000001069
GO:0005783 endoplasmic reticulum C
IDA
SceS000001069
GO:0005829 cytosol C
IDA
SpoSPBP19A11.03c
GO:0005838 proteasome regulatory particle C
IDA
DmeFBgn0028695
ISS
DmeFBgn0028695
PfaPFB0260w
TAS
HsaPSMD2
GO:0005886 plasma membrane C
IDA
AthRPN1A
GO:0008540 proteasome regulatory particle, base
subcomplex
C
IDA
AthRPN1A
SceS000001069
ISS
AthRPN1A
DmeFBgn0028695
SpoSPBP19A11.03c
NAS
DmeFBgn0028695
TAS
AthRPN1B
GO:0034515 proteasome storage granule C
IDA
SceS000001069
GO:0003674 molecular_function F
ND
PfaPFB0260w
GO:0004175 endopeptidase activity F
IDA
DmeFBgn0028695
ISS
SpoSPBP19A11.03c
TAS
SceS000001069
GO:0005515 protein binding F
IPI
HsaPSMD2
MmuMGI:1096584
SpoSPBP19A11.03c
GO:0030674 protein binding, bridging F
IPI
SceS000001069
GO:0000003 reproduction P
IMP
CelWBGene00004458
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0028695
GO:0000278 mitotic cell cycle P
IC
SpoSPBP19A11.03c
GO:0002119 nematode larval development P
IMP
CelWBGene00004458
GO:0006508 proteolysis P
IDA
DmeFBgn0028695
ISS
DmeFBgn0028695
RCA
SceS000001069
GO:0006511 ubiquitin-dependent protein catabolic
process
P
ISS
PfaPFB0260w
TAS
AthRPN1A
SceS000001069
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0028695
GO:0007346 regulation of mitotic cell cycle P
NAS
SpoSPBP19A11.03c
GO:0008150 biological_process P
ND
MmuMGI:1096584
GO:0008283 cell proliferation P
IMP
DmeFBgn0028695
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004458
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004458
GO:0030163 protein catabolic process P
TAS
AthRPN1A
RPN1B
GO:0031145 anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic
process
P
EXP
HsaPSMD2
GO:0040007 growth P
IMP
CelWBGene00004458
GO:0043161 proteasomal ubiquitin-dependent protein catabolic
process
P
IGI
SpoSPBP19A11.03c
GO:0043623 cellular protein complex assembly P
RCA
SceS000001069
GO:0051436 negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell
cycle
P
EXP
HsaPSMD2
GO:0051437 positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell
cycle
P
EXP
HsaPSMD2
GO:0051726 regulation of cell cycle P
IMP
AthRPN1A

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1358

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga4669 ENSANGP00000022086
Anopheles gambiae (Aga) aga4668 ENSANGP00000029144
Ashbya gossypii (Ago) ago1119 ACR072C
Arabidopsis thaliana (Ath) ath8921 At2g20580.1
Arabidopsis thaliana (Ath) ath20876 At4g28470.1
Caenorhabditis elegans (Cel) cel16021 T22D1.9
(CE17253;
WBGene00004458)
Candida glabrata (Cgl) cgl3019 CAGL0J00605g
Cryptococcus neoformans (Cne) cne3781 185.m02355
Dictyostelium discoideum (Ddi) ddi10507 DDB0192101
Debaryomyces hansenii (Dha) dha3996 DEHA0E17083g
Drosophila melanogaster (Dme) dme10302 CG7762-PA
(FBgn0028695)
Encephalitozoon cuniculi (Ecu) ecu746 19074108
Takifugu rubripes (Fru) fru20540 SINFRUP00000137162
Takifugu rubripes (Fru) fru20541 SINFRUP00000168426
Takifugu rubripes (Fru) fru20539 SINFRUP00000169636
Takifugu rubripes (Fru) fru20538 SINFRUP00000174348
Gallus gallus (Gga) gga25360 ENSGALP00000010152
Gallus gallus (Gga) gga25359 ENSGALP00000010153
(PSMD2)
Homo sapiens (Hsa) hsa23548 ENSP00000310129
(PSMD2)
Q13200
Kluyveromyces lactis (Kla) kla3468 KLLA0E11484g
Mus musculus (Mmu) mmu10088 ENSMUSP00000007212
(MGI:1096584)
Q8VDM4
Neurospora crassa (Ncr) ncr7517 NCU07721.2
Oryza sativa (Osa) osa20325 3408.m00138
Oryza sativa (Osa) osa38918 4912.m00055
Oryza sativa (Osa) osa46221 5700.m00161
Oryza sativa (Osa) osa53970 6149.m00343
Plasmodium falciparum (Pfa) pfa5 PFB0260w
Rattus norvegicus (Rno) rno7579 ENSRNOP00000002358
(RGD:1305752)
Q4FZT9
Rattus norvegicus (Rno) rno7578 ENSRNOP00000042267
Saccharomyces cerevisiae (Sce) sce2775 YHR027C
(S000001069)
Schizosaccharomyces pombe (Spo) spo321 SPBP19A11.03c P87048
Yarrowia lipolytica (Yli) yli862 YALI0B02860g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1096584
GO:0005634 nucleus C
IDA
SceS000001069
SpoSPBP19A11.03c
TAS
AthAt2g20580
SpoSPBP19A11.03c
GO:0005737 cytoplasm C
IDA
SceS000001069
GO:0005783 endoplasmic reticulum C
IDA
SceS000001069
GO:0005829 cytosol C
IDA
SpoSPBP19A11.03c
GO:0005838 proteasome regulatory particle C
IDA
DmeFBgn0028695
ISS
Dme