YOGY Home YOGY Help

Search term: YHR039C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name MSC7
SGD link S000001081
Alternative ID YHR039C
Description Protein of unknown function, green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; msc7 mutants are defective in directing meiotic recombination events to homologous chromatids
Synonyms YHR039C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2454 A---YP-

KOGs classification KOGs description
METABOLISM Betaine aldehyde dehydrogenase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g66658 GI:15230768
Saccharomyces cerevisiae (Sce) YHR039c
(S000001081)		 GI:6321828 P38694
Schizosaccharomyces pombe (Spo) SPBC21C3.15c GI:19113387 Q9P7K9


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC21C3.15c
GO:0005737 cytoplasm C
IDA
SpoSPBC21C3.15c
GO:0005783 endoplasmic reticulum C
IDA
AthAt3g66658
SceS000001081
ISS
SpoSPBC21C3.15c
GO:0005829 cytosol C
IDA
SpoSPBC21C3.15c
GO:0003674 molecular_function F
ND
SceS000001081
GO:0004028 3-chloroallyl aldehyde dehydrogenase
activity		 F
ISS
AthAt3g66658
GO:0016491 oxidoreductase activity F
RCA
SceS000001081
GO:0006066 alcohol metabolic process P
RCA
SceS000001081
GO:0007131 reciprocal meiotic recombination P
IMP
SceS000001081
GO:0008150 biological_process P
ND
SpoSPBC21C3.15c
GO:0044255 cellular lipid metabolic process P
RCA
SceS000001081

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6083

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPBC21C3.15c GI:19113387 Q9P7K9
Saccharomyces cerevisiae (Sce) MSC7
(S000001081)		 GI:6321828 P38694
Kluyveromyces lactis (Kla) KLLA0C10615g GI:50305427
Eremothecium gossypii (Ego) AGOS_AAL075W GI:45184749
Magnaporthe grisea (Mgr) MGG_02766 GI:39970599
Neurospora crassa (Ncr) NCU07442.1 GI:32414497
Arabidopsis thaliana (Ath) ALDH22a1 GI:42572293
Oryza sativa (Osa) Os07g0688800 GI:115474211


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC21C3.15c
GO:0005737 cytoplasm C
IDA
SpoSPBC21C3.15c
GO:0005783 endoplasmic reticulum C
IDA
AthALDH22a1
SceS000001081
ISS
SpoSPBC21C3.15c
GO:0005829 cytosol C
IDA
SpoSPBC21C3.15c
GO:0003674 molecular_function F
ND
SceS000001081
GO:0004028 3-chloroallyl aldehyde dehydrogenase
activity		 F
ISS
AthALDH22a1
GO:0016491 oxidoreductase activity F
RCA
SceS000001081
GO:0006066 alcohol metabolic process P
RCA
SceS000001081
GO:0007131 reciprocal meiotic recombination P
IMP
SceS000001081
GO:0008150 biological_process P
ND
SpoSPBC21C3.15c
GO:0044255 cellular lipid metabolic process P
RCA
SceS000001081

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_7301

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago112 AAL075W
Arabidopsis thaliana (Ath) ath17823 At3g66658.1
Arabidopsis thaliana (Ath) ath17824 At3g66658.2
Candida glabrata (Cgl) cgl1615 CAGL0F08965g
Dictyostelium discoideum (Ddi) ddi12510 DDB0231482
Debaryomyces hansenii (Dha) dha5482 DEHA0F24574g
Kluyveromyces lactis (Kla) kla1672 KLLA0C10615g
Neurospora crassa (Ncr) ncr7244 NCU07442.2
Oryza sativa (Osa) osa54896 6093.m00031
Saccharomyces cerevisiae (Sce) sce2790 YHR039C
(S000001081)
Schizosaccharomyces pombe (Spo) spo2652 SPBC21C3.15c Q9P7K9
Yarrowia lipolytica (Yli) yli4329 YALI0E11341g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC21C3.15c
GO:0005737 cytoplasm C
IDA
SpoSPBC21C3.15c
GO:0005783 endoplasmic reticulum C
IDA
AthAt3g66658
SceS000001081
ISS
SpoSPBC21C3.15c
GO:0005829 cytosol C
IDA
SpoSPBC21C3.15c
GO:0003674 molecular_function F
ND
SceS000001081
GO:0004028 3-chloroallyl aldehyde dehydrogenase
activity		 F
ISS
AthAt3g66658
GO:0016491 oxidoreductase activity F
RCA
SceS000001081
GO:0006066 alcohol metabolic process P
RCA
SceS000001081
GO:0007131 reciprocal meiotic recombination P
IMP
SceS000001081
GO:0008150 biological_process P
ND
SpoSPBC21C3.15c
GO:0044255 cellular lipid metabolic process P
RCA
SceS000001081

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC21C3.15c
(Q9P7K9)		 YHR039C
(S000001081)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC21C3.15c
GO:0005737 cytoplasm C
IDA
SpoSPBC21C3.15c
GO:0005783 endoplasmic reticulum C
IDA
SceS000001081
ISS
SpoSPBC21C3.15c
GO:0005829 cytosol C
IDA
SpoSPBC21C3.15c
GO:0003674 molecular_function F
ND
SceS000001081
GO:0016491 oxidoreductase activity F
RCA
SceS000001081
GO:0006066 alcohol metabolic process P
RCA
SceS000001081
GO:0007131 reciprocal meiotic recombination P
IMP
SceS000001081
GO:0008150 biological_process P
ND
SpoSPBC21C3.15c
GO:0044255 cellular lipid metabolic process P
RCA
SceS000001081

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk