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Search term: YHR040W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name BCD1
SGD link S000001082
Alternative ID YHR040W
Description Essential protein required for the accumulation of box C/D snoRNA
Synonyms YHR040W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2858 -CDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE29017
(WBGene00006489)		 GI:17566936 Q23644
Drosophila melanogaster (Dme) 7292785 GI:7292785
Homo sapiens (Hsa) Hs20149643
(ZNHIT6)		 GI:20149643
Saccharomyces cerevisiae (Sce) YHR040w
(S000001082)		 GI:6321830 P38772
Schizosaccharomyces pombe (Spo) SPCC613.07 GI:19075195 O74906


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001082
SpoSPCC613.07
ISS
SpoSPCC613.07
GO:0005737 cytoplasm C
IDA
SceS000001082
ISS
SpoSPCC613.07
GO:0070761 pre-snoRNP complex C
IDA
HsaZNHIT6
GO:0003674 molecular_function F
ND
SpoSPCC613.07
GO:0003676 nucleic acid binding F
NAS
SceS000001082
GO:0005515 protein binding F
IPI
HsaZNHIT6
GO:0042802 identical protein binding F
IPI
HsaZNHIT6
GO:0000492 box C/D snoRNP assembly P
IMP
HsaZNHIT6
GO:0009451 RNA modification P
RCA
SceS000001082
GO:0016074 snoRNA metabolic process P
IMP
SceS000001082
ISS
SpoSPCC613.07

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39217

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) BCD1
(S000001082)		 GI:6321830 P38772
Kluyveromyces lactis (Kla) KLLA0C10659g GI:50305431
Eremothecium gossypii (Ego) AGOS_AAL077C GI:45184747


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001082
GO:0005737 cytoplasm C
IDA
SceS000001082
GO:0003676 nucleic acid binding F
NAS
SceS000001082
GO:0009451 RNA modification P
RCA
SceS000001082
GO:0016074 snoRNA metabolic process P
IMP
SceS000001082

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3829

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga13589 ENSANGP00000000640
Ashbya gossypii (Ago) ago110 AAL077C
Caenorhabditis elegans (Cel) cel22292 ZK856.9
(CE29017;
WBGene00006489)
Candida glabrata (Cgl) cgl1617 CAGL0F09009g
Dictyostelium discoideum (Ddi) ddi3247 DDB0203515
Debaryomyces hansenii (Dha) dha5525 DEHA0F25520g
Drosophila melanogaster (Dme) dme17587 CG1463-PA
(FBgn0030406)
Takifugu rubripes (Fru) fru19594 SINFRUP00000169614
Gallus gallus (Gga) gga22549 ENSGALP00000014087
Homo sapiens (Hsa) hsa1441 ENSP00000263718
Kluyveromyces lactis (Kla) kla1674 KLLA0C10659g
Mus musculus (Mmu) mmu17677 ENSMUSP00000060876
Neurospora crassa (Ncr) ncr3262 NCU03365.2
Oryza sativa (Osa) osa11487 2797.m00209
Rattus norvegicus (Rno) rno17136 ENSRNOP00000041785
(RGD:1308723)		 B1WC05
Rattus norvegicus (Rno) rno17135 ENSRNOP00000048650
Saccharomyces cerevisiae (Sce) sce2792 YHR040W
(S000001082)
Schizosaccharomyces pombe (Spo) spo2421 SPCC613.07 O74906
Yarrowia lipolytica (Yli) yli4332 YALI0E11363g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001082
SpoSPCC613.07
ISS
SpoSPCC613.07
GO:0005737 cytoplasm C
IDA
SceS000001082
ISS
SpoSPCC613.07
GO:0003674 molecular_function F
ND
SpoSPCC613.07
GO:0003676 nucleic acid binding F
NAS
SceS000001082
GO:0009451 RNA modification P
RCA
SceS000001082
GO:0016074 snoRNA metabolic process P
IMP
SceS000001082
ISS
SpoSPCC613.07

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC613.07
(O74906)		 YHR040W
(S000001082)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001082
SpoSPCC613.07
ISS
SpoSPCC613.07
GO:0005737 cytoplasm C
IDA
SceS000001082
ISS
SpoSPCC613.07
GO:0003674 molecular_function F
ND
SpoSPCC613.07
GO:0003676 nucleic acid binding F
NAS
SceS000001082
GO:0009451 RNA modification P
RCA
SceS000001082
GO:0016074 snoRNA metabolic process P
IMP
SceS000001082
ISS
SpoSPCC613.07

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