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HomoloGene cluster | Phylogenetic pattern |
39218 |
Species | Gene ID | NCBI link | UniProt link |
Saccharomyces cerevisiae (Sce) | SRB2 (S000001083) | GI:6321831 | |
Kluyveromyces lactis (Kla) | KLLA0C10780g | GI:50305441 | |
Eremothecium gossypii (Ego) | AGOS_AAL082W | GI:45184742 |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0016592 | mediator complex | C |
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GO:0016455 | RNA polymerase II transcription mediator activity | F |
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GO:0000398 | nuclear mRNA splicing, via spliceosome | P |
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GO:0006366 | transcription from RNA polymerase II promoter | P |
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GO:0006397 | mRNA processing | P |
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GO:0008380 | RNA splicing | P |
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GO:0010689 | negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to chemical stimulus | P |
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GO:0010691 | negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels | P |
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GO:0016071 | mRNA metabolic process | P |
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OrthoMCL cluster | Phylogenetic pattern |
OG1_20806 |
Species | OrthoMCL sequence | Model organism protein page | UniProt link |
Ashbya gossypii (Ago) | ago105 | AAL082W | |
Candida glabrata (Cgl) | cgl841 | CAGL0D04136g | |
Debaryomyces hansenii (Dha) | dha828 | DEHA0B03278g | |
Kluyveromyces lactis (Kla) | kla1679 | KLLA0C10780g | |
Saccharomyces cerevisiae (Sce) | sce2793 | YHR041C (S000001083) | |
Yarrowia lipolytica (Yli) | yli2656 | YALI0C23320g |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0016592 | mediator complex | C |
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GO:0016455 | RNA polymerase II transcription mediator activity | F |
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GO:0000398 | nuclear mRNA splicing, via spliceosome | P |
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GO:0006366 | transcription from RNA polymerase II promoter | P |
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GO:0006397 | mRNA processing | P |
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GO:0008380 | RNA splicing | P |
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GO:0010689 | negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to chemical stimulus | P |
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GO:0010691 | negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels | P |
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GO:0016071 | mRNA metabolic process | P |
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Curated yeast ortholog results:
S. pombe systematic ID | S. cerevisiae systematic ID |
SPAC17G8.05 (Q10317) | YHR041C (S000001083) |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||||||
GO:0005634 | nucleus | C |
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GO:0016592 | mediator complex | C |
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GO:0005515 | protein binding | F |
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GO:0016455 | RNA polymerase II transcription mediator activity | F |
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GO:0000398 | nuclear mRNA splicing, via spliceosome | P |
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GO:0006366 | transcription from RNA polymerase II promoter | P |
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GO:0006397 | mRNA processing | P |
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GO:0008380 | RNA splicing | P |
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GO:0010689 | negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to chemical stimulus | P |
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GO:0010691 | negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels | P |
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GO:0016071 | mRNA metabolic process | P |
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GO:0034613 | cellular protein localization | P |
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s.khadayate@ucl.ac.uk |