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Search term: YHR072W-A


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NOP10
SGD link S000007455
Alternative ID YHR072W-A
Description Constituent of small nucleolar ribonucleoprotein particles containing H/ACA-type snoRNAs, which are required for pseudouridylation and processing of pre-18S rRNA
Synonyms YHR072W-A
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3503 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING H/ACA snoRNP complex, subunit NOP10

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g20490 GI:18399368
Caenorhabditis elegans (Cel) CE27803
(WBGene00007708)
GI:17505703 Q9XVR8
Drosophila melanogaster (Dme) 7303703 GI:7303703
Homo sapiens (Hsa) Hs8923942
(NOP10)
GI:8923942 Q9NPE3
Homo sapiens (Hsa) Hs20474966 GI:20474966
Saccharomyces cerevisiae (Sce) YHR072w-a
(S000007455)
GI:7839181 Q6Q547
Schizosaccharomyces pombe (Spo) SPAP27G11.13c GI:19114330 Q9P7M5


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
AthAt2g20490
SpoSPAP27G11.13c
RCA
SceS000007455
GO:0005732 small nucleolar ribonucleoprotein
complex
C
IPI
SceS000007455
ISS
SpoSPAP27G11.13c
TAS
HsaNOP10
GO:0015030 Cajal body C
IDA
AthAt2g20490
GO:0003674 molecular_function F
ND
SpoSPAP27G11.13c
GO:0003723 RNA binding F
IDA
SceS000007455
ISS
AthAt2g20490
GO:0005515 protein binding F
IPI
HsaNOP10
GO:0001522 pseudouridine synthesis P
ISS
SpoSPAP27G11.13c
NAS
HsaNOP10
GO:0006364 rRNA processing P
IMP
SceS000007455
ISS
SpoSPAP27G11.13c
GO:0010197 polar nucleus fusion P
IMP
AthAt2g20490
GO:0031118 rRNA pseudouridine synthesis P
IMP
SceS000007455
GO:0031120 snRNA pseudouridine synthesis P
IDA
SceS000007455
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00007708

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
41160

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) NOP10
(S000007455)
GI:7839181 Q6Q547
Eremothecium gossypii (Ego) AGOS_AGR354W GI:45201450


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
RCA
SceS000007455
GO:0005732 small nucleolar ribonucleoprotein
complex
C
IPI
SceS000007455
GO:0003723 RNA binding F
IDA
SceS000007455
GO:0006364 rRNA processing P
IMP
SceS000007455
GO:0031118 rRNA pseudouridine synthesis P
IMP
SceS000007455
GO:0031120 snRNA pseudouridine synthesis P
IDA
SceS000007455

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3395

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga534 ENSANGP00000015687
Ashbya gossypii (Ago) ago4665 AGR354W
Arabidopsis thaliana (Ath) ath8910 At2g20490.1
Caenorhabditis elegans (Cel) cel2627 C25A1.6
(CE27803;
WBGene00007708)
Candida glabrata (Cgl) cgl3466 CAGL0J10802g
Cryptococcus neoformans (Cne) cne658 163.m03879
Dictyostelium discoideum (Ddi) ddi9533 DDB0187899
Debaryomyces hansenii (Dha) dha3424 DEHA0E04224g
Drosophila melanogaster (Dme) dme4378 CG7637-PA
(FBgn0033548)
Takifugu rubripes (Fru) fru4186 SINFRUP00000156828
Homo sapiens (Hsa) hsa10386 ENSP00000332198
(NOP10)
Q9NPE3
Kluyveromyces lactis (Kla) kla1948 KLLA0C16753g
Mus musculus (Mmu) mmu15205 ENSMUSP00000028553
(MGI:1913431)
Q9CQS2
Rattus norvegicus (Rno) rno6630 ENSRNOP00000002631
Rattus norvegicus (Rno) rno19401 ENSRNOP00000006887
(RGD:1582780)
Saccharomyces cerevisiae (Sce) sce2834 YHR072W-A
(S000007455)
Schizosaccharomyces pombe (Spo) spo4607 SPAP27G11.13c Q9P7M5
Yarrowia lipolytica (Yli) yli1751 YALI0C00693g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1913431
GO:0005730 nucleolus C
IDA
AthAt2g20490
SpoSPAP27G11.13c
RCA
SceS000007455
GO:0005732 small nucleolar ribonucleoprotein
complex
C
IPI
SceS000007455
ISS
SpoSPAP27G11.13c
GO:0015030 Cajal body C
IDA
AthAt2g20490
GO:0003674 molecular_function F
ND
MmuMGI:1913431
SpoSPAP27G11.13c
GO:0003723 RNA binding F
IDA
SceS000007455
ISS
AthAt2g20490
GO:0001522 pseudouridine synthesis P
ISS
SpoSPAP27G11.13c
GO:0006364 rRNA processing P
IMP
SceS000007455
ISS
SpoSPAP27G11.13c
GO:0008150 biological_process P
ND
MmuMGI:1913431
GO:0010197 polar nucleus fusion P
IMP
AthAt2g20490
GO:0031118 rRNA pseudouridine synthesis P
IMP
SceS000007455
GO:0031120 snRNA pseudouridine synthesis P
IDA
SceS000007455
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00007708

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAP27G11.13c
(Q9P7M5)
YHR072W-A
(S000007455)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SpoSPAP27G11.13c
RCA
SceS000007455
GO:0005732 small nucleolar ribonucleoprotein
complex
C
IPI
SceS000007455
ISS
SpoSPAP27G11.13c
GO:0003674 molecular_function F
ND
SpoSPAP27G11.13c
GO:0003723 RNA binding F
IDA
SceS000007455
GO:0001522 pseudouridine synthesis P
ISS
SpoSPAP27G11.13c
GO:0006364 rRNA processing P
IMP
SceS000007455
ISS
SpoSPAP27G11.13c
GO:0031118 rRNA pseudouridine synthesis P
IMP
SceS000007455
GO:0031120 snRNA pseudouridine synthesis P
IDA
SceS000007455

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GO info in one table:

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