YOGY Home YOGY Help

Search term: YHR085W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name IPI1
SGD link S000001127
Alternative ID YHR085W
Description Essential component of the Rix1 complex (with Rix1p and Ipi3p) that is required for processing of ITS2 sequences from 35S pre-rRNA; Rix1 complex associates with Mdn1p in pre-60S ribosomal particles
Synonyms YHR085W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2149 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At4g04680 GI:18412643
Arabidopsis thaliana (Ath) At5g06350 GI:15240021
Arabidopsis thaliana (Ath) At5g27010 GI:15240428
Caenorhabditis elegans (Cel) CE19199
(WBGene00012977)
GI:17556014
Caenorhabditis elegans (Cel) CE28855_2 GI:17556008
Drosophila melanogaster (Dme) 7290881
(FBgn0029999)
GI:18858027
Homo sapiens (Hsa) Hs8923269
(TEX10)
GI:8923269
Saccharomyces cerevisiae (Sce) YHR085w
(S000001127)
GI:6321877 P38803
Schizosaccharomyces pombe (Spo) SPCC1393.06c GI:19075464 O94718


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g06350
GO:0005634 nucleus C
IDA
SceS000001127
SpoSPCC1393.06c
ISS
SpoSPCC1393.06c
GO:0005654 nucleoplasm C
IDA
SceS000001127
GO:0005816 spindle pole body C
IDA
SpoSPCC1393.06c
GO:0071339 MLL1 complex C
IDA
HsaTEX10
GO:0003674 molecular_function F
ND
SceS000001127
SpoSPCC1393.06c
GO:0000027 ribosomal large subunit assembly P
IMP
SceS000001127
GO:0000054 ribosomal subunit export from nucleus P
RCA
SceS000001127
GO:0002119 nematode larval development P
IMP
CelWBGene00012974
WBGene00012977
GO:0006364 rRNA processing P
IMP
SceS000001127
ISS
SpoSPCC1393.06c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00012977
WBGene00012974
GO:0008150 biological_process P
ND
AthAt5g06350
At4g04680
GO:0040007 growth P
IMP
CelWBGene00012974
WBGene00012977
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00012974
WBGene00012977
GO:0042255 ribosome assembly P
RCA
SceS000001127
GO:0042273 ribosomal large subunit biogenesis P
RCA
SceS000001127

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39240

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) IPI1
(S000001127)
GI:6321877 P38803
Kluyveromyces lactis (Kla) KLLA0F14839g GI:50311445
Eremothecium gossypii (Ego) AGOS_ADR306W GI:45188179
Magnaporthe grisea (Mgr) MGG_02761 GI:39970589
Neurospora crassa (Ncr) NCU09094.1 GI:32422085


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001127
GO:0005654 nucleoplasm C
IDA
SceS000001127
GO:0003674 molecular_function F
ND
SceS000001127
GO:0000027 ribosomal large subunit assembly P
IMP
SceS000001127
GO:0000054 ribosomal subunit export from nucleus P
RCA
SceS000001127
GO:0006364 rRNA processing P
IMP
SceS000001127
GO:0042255 ribosome assembly P
RCA
SceS000001127
GO:0042273 ribosomal large subunit biogenesis P
RCA
SceS000001127

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_4154

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga7537 ENSANGP00000027514
Ashbya gossypii (Ago) ago2047 ADR306W
Arabidopsis thaliana (Ath) ath22830 At5g06350.1
Arabidopsis thaliana (Ath) ath24977 At5g27010.1
Caenorhabditis elegans (Cel) cel19195 Y48A6C.4
(CE19199;
WBGene00012977)
Candida glabrata (Cgl) cgl4707 CAGL0M01210g
Cryptococcus neoformans (Cne) cne1066 163.m06623
Dictyostelium discoideum (Ddi) ddi12146 DDB0220122
Debaryomyces hansenii (Dha) dha5092 DEHA0F15873g
Drosophila melanogaster (Dme) dme16941 CG1575-PA
(FBgn0029999)
Danio rerio (Dre) dre24168 ENSDARP00000011106
Takifugu rubripes (Fru) fru6989 SINFRUP00000161024
Gallus gallus (Gga) gga10812 ENSGALP00000021875
(TEX10)
Q5ZM41
Homo sapiens (Hsa) hsa31643 ENSP00000344645
Kluyveromyces lactis (Kla) kla4747 KLLA0F14839g
Mus musculus (Mmu) mmu18121 ENSMUSP00000030030
(MGI:1344413)
Q3URQ0
Neurospora crassa (Ncr) ncr8862 NCU09094.2
Oryza sativa (Osa) osa42676 5416.m00146
Rattus norvegicus (Rno) rno23116 ENSRNOP00000011401
(RGD:1312045)
Saccharomyces cerevisiae (Sce) sce2850 YHR085W
(S000001127)
Schizosaccharomyces pombe (Spo) spo4206 SPCC1393.06c O94718
Yarrowia lipolytica (Yli) yli342 YALI0A10252g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g06350
MmuMGI:1344413
GO:0005634 nucleus C
IDA
SceS000001127
SpoSPCC1393.06c
ISS
SpoSPCC1393.06c
GO:0005654 nucleoplasm C
IDA
SceS000001127
GO:0005816 spindle pole body C
IDA
SpoSPCC1393.06c
GO:0003674 molecular_function F
ND
MmuMGI:1344413
SceS000001127
SpoSPCC1393.06c
GO:0000027 ribosomal large subunit assembly P
IMP
SceS000001127
GO:0000054 ribosomal subunit export from nucleus P
RCA
SceS000001127
GO:0002119 nematode larval development P
IMP
CelWBGene00012977
GO:0006364 rRNA processing P
IMP
SceS000001127
ISS
SpoSPCC1393.06c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00012977
GO:0008150 biological_process P
ND
AthAt5g06350
MmuMGI:1344413
GO:0040007 growth P
IMP
CelWBGene00012977
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00012977
GO:0042255 ribosome assembly P
RCA
SceS000001127
GO:0042273 ribosomal large subunit biogenesis P
RCA
SceS000001127

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC1393.06c
(O94718)
YHR085W
(S000001127)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001127
SpoSPCC1393.06c
ISS
SpoSPCC1393.06c
GO:0005654 nucleoplasm C
IDA
SceS000001127
GO:0005816 spindle pole body C
IDA
SpoSPCC1393.06c
GO:0003674 molecular_function F
ND
SceS000001127
SpoSPCC1393.06c
GO:0000027 ribosomal large subunit assembly P
IMP
SceS000001127
GO:0000054 ribosomal subunit export from nucleus P
RCA
SceS000001127
GO:0006364 rRNA processing P
IMP
SceS000001127
ISS
SpoSPCC1393.06c
GO:0042255 ribosome assembly P
RCA
SceS000001127
GO:0042273 ribosomal large subunit biogenesis P
RCA
SceS000001127

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk