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Search term: YHR087W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RTC3
SGD link S000001129
Alternative ID YHR087W
Description Protein of unknown function involved in RNA metabolism; has structural similarity to SBDS, the human protein mutated in Shwachman-Diamond Syndrome (the yeast SBDS ortholog = SDO1); null mutation suppresses cdc13-1 temperature sensitivity
Synonyms YHR087W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
48762

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) YHR087W
(S000001129)		 GI:6321879
Kluyveromyces lactis (Kla) KLLA0F21736g GI:50312037


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001129
GO:0005737 cytoplasm C
IDA
SceS000001129
GO:0003674 molecular_function F
ND
SceS000001129
GO:0016070 RNA metabolic process P
IGI
SceS000001129

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_14684

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Candida glabrata (Cgl) cgl2153 CAGL0H02101g
Cryptococcus neoformans (Cne) cne1728 164.m02090
Debaryomyces hansenii (Dha) dha5479 DEHA0F24508g
Kluyveromyces lactis (Kla) kla5050 KLLA0F21736g
Neurospora crassa (Ncr) ncr2677 NCU02765.2
Saccharomyces cerevisiae (Sce) sce2853 YHR087W
(S000001129)
Schizosaccharomyces pombe (Spo) spo2276 SPBC21C3.19 Q9P7K6
Yarrowia lipolytica (Yli) yli364 YALI0A10747g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001129
SpoSPBC21C3.19
ISS
SpoSPBC21C3.19
GO:0005737 cytoplasm C
IDA
SceS000001129
ISS
SpoSPBC21C3.19
GO:0005829 cytosol C
IDA
SpoSPBC21C3.19
GO:0003674 molecular_function F
ND
SceS000001129
SpoSPBC21C3.19
GO:0016070 RNA metabolic process P
IGI
SceS000001129
ISS
SpoSPBC21C3.19
GO:0033554 cellular response to stress P
IEP
SpoSPBC21C3.19

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC21C3.19
(Q9P7K6)		 YHR087W
(S000001129)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001129
SpoSPBC21C3.19
ISS
SpoSPBC21C3.19
GO:0005737 cytoplasm C
IDA
SceS000001129
ISS
SpoSPBC21C3.19
GO:0005829 cytosol C
IDA
SpoSPBC21C3.19
GO:0003674 molecular_function F
ND
SceS000001129
SpoSPBC21C3.19
GO:0016070 RNA metabolic process P
IGI
SceS000001129
ISS
SpoSPBC21C3.19
GO:0033554 cellular response to stress P
IEP
SpoSPBC21C3.19

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