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Search term: YHR154W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RTT107
SGD link S000001197
Alternative ID YHR154W
Description Protein implicated in Mms22-dependent DNA repair during S phase, DNA damage induces phosphorylation by Mec1p at one or more SQ/TQ motifs; interacts with Mms22p and Slx4p; has four BRCT domains; has a role in regulation of Ty1 transposition
Synonyms YHR154W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2043 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSINGCELLULAR PROCESSES AND SIGNALINGCELLULAR PROCESSES AND SIGNALINGINFORMATION STORAGE AND PROCESSING Signaling protein SWIFT and related BRCT domain proteins

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g67180_1 GI:15220366
Arabidopsis thaliana (Ath) At2g41450_1 GI:15227353
Arabidopsis thaliana (Ath) At3g21480 GI:15233075
Arabidopsis thaliana (Ath) At4g03130 GI:15236253
Caenorhabditis elegans (Cel) CE13623
(WBGene00004031)		 GI:17542400 Q94046
Caenorhabditis elegans (Cel) CE23980 GI:17542402 Q94046
Drosophila melanogaster (Dme) 7292186 GI:7292186
Drosophila melanogaster (Dme) 7294426 GI:7294426
Drosophila melanogaster (Dme) 7294427 GI:7294427
Homo sapiens (Hsa) Hs22046233 GI:22046233
Homo sapiens (Hsa) Hs7661966_2 GI:7661966
Saccharomyces cerevisiae (Sce) YHR154w
(S000001197)		 GI:6321948 P38850
Schizosaccharomyces pombe (Spo) SPACUNK4.14 GI:19114876 O14079
Schizosaccharomyces pombe (Spo) SPBC582.05c GI:19111965 Q10337


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005622 intracellular C
ISS
AthAt4g03130
GO:0005634 nucleus C
IDA
SceS000001197
SpoSPACUNK4.14
SPBC582.05c
ISS
SpoSPBC582.05c
GO:0035361 Cul8-RING ubiquitin ligase complex C
IDA
SceS000001197
GO:0003674 molecular_function F
ND
AthAt3g21480
SceS000001197
SpoSPBC582.05c
SPACUNK4.14
GO:0003713 transcription coactivator activity F
ISS
AthAt4g03130
GO:0008080 N-acetyltransferase activity F
ISS
AthAt2g41450
GO:0000003 reproduction P
IMP
CelWBGene00004031
GO:0000018 regulation of DNA recombination P
IMP
SpoSPBC582.05c
GO:0006301 postreplication repair P
IMP
SpoSPBC582.05c
GO:0006302 double-strand break repair P
IMP
SceS000001197
GO:0008150 biological_process P
ND
AthAt4g03130
At3g21480
SpoSPACUNK4.14
GO:0010526 negative regulation of transposition,
RNA-mediated		 P
IMP
SceS000001197
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00004031
GO:0051276 chromosome organization P
IGI
SpoSPBC582.05c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
48770

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) brc1
(SPBC582.05c)		 GI:19111965 Q10337
Saccharomyces cerevisiae (Sce) RTT107
(S000001197)		 GI:6321948 P38850
Kluyveromyces lactis (Kla) KLLA0E15708g GI:50309297
Eremothecium gossypii (Ego) AGOS_ADL145C GI:45187728
Magnaporthe grisea (Mgr) MGG_01032 GI:39973643
Neurospora crassa (Ncr) NCU03924.1 GI:32405260


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001197
SpoSPBC582.05c
ISS
SpoSPBC582.05c
GO:0035361 Cul8-RING ubiquitin ligase complex C
IDA
SceS000001197
GO:0003674 molecular_function F
ND
SceS000001197
SpoSPBC582.05c
GO:0000018 regulation of DNA recombination P
IMP
SpoSPBC582.05c
GO:0006301 postreplication repair P
IMP
SpoSPBC582.05c
GO:0006302 double-strand break repair P
IMP
SceS000001197
GO:0010526 negative regulation of transposition,
RNA-mediated		 P
IMP
SceS000001197
GO:0051276 chromosome organization P
IGI
SpoSPBC582.05c

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_13283

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago1596 ADL145C
Candida glabrata (Cgl) cgl2607 CAGL0I01958g
Debaryomyces hansenii (Dha) dha97 DEHA0A02211g
Kluyveromyces lactis (Kla) kla3654 KLLA0E15708g
Neurospora crassa (Ncr) ncr3813 NCU03924.2
Oryza sativa (Osa) osa51569 5980.m00055
Saccharomyces cerevisiae (Sce) sce2925 YHR154W
(S000001197)
Schizosaccharomyces pombe (Spo) spo1562 SPBC582.05c Q10337
Yarrowia lipolytica (Yli) yli1390 YALI0B15576g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001197
SpoSPBC582.05c
ISS
SpoSPBC582.05c
GO:0035361 Cul8-RING ubiquitin ligase complex C
IDA
SceS000001197
GO:0003674 molecular_function F
ND
SceS000001197
SpoSPBC582.05c
GO:0000018 regulation of DNA recombination P
IMP
SpoSPBC582.05c
GO:0006301 postreplication repair P
IMP
SpoSPBC582.05c
GO:0006302 double-strand break repair P
IMP
SceS000001197
GO:0010526 negative regulation of transposition,
RNA-mediated		 P
IMP
SceS000001197
GO:0051276 chromosome organization P
IGI
SpoSPBC582.05c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC582.05c
(Q10337)		 YHR154W
(S000001197)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001197
SpoSPBC582.05c
ISS
SpoSPBC582.05c
GO:0035361 Cul8-RING ubiquitin ligase complex C
IDA
SceS000001197
GO:0003674 molecular_function F
ND
SceS000001197
SpoSPBC582.05c
GO:0000018 regulation of DNA recombination P
IMP
SpoSPBC582.05c
GO:0006301 postreplication repair P
IMP
SpoSPBC582.05c
GO:0006302 double-strand break repair P
IMP
SceS000001197
GO:0010526 negative regulation of transposition,
RNA-mediated		 P
IMP
SceS000001197
GO:0051276 chromosome organization P
IGI
SpoSPBC582.05c

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