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Search term: YHR164C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name DNA2
SGD link S000001207
Alternative ID YHR164C
Description Tripartite DNA replication factor with single-stranded DNA-dependent ATPase, ATP-dependent nuclease, and helicase activities; required for Okazaki fragment processing; involved in DNA repair; cell-cycle dependent localization
Synonyms YHR164C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1805 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING DNA replication helicase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g08840 GI:15221015
Caenorhabditis elegans (Cel) CE02219
(WBGene00001016)		 GI:17533985 Q20371
Caenorhabditis elegans (Cel) CE23725 GI:17533987 Q20371
Drosophila melanogaster (Dme) 7291108 GI:7291108
Homo sapiens (Hsa) Hs20470741 GI:20470741
Saccharomyces cerevisiae (Sce) YHR164c
(S000001207)		 GI:6321958 P38859
Schizosaccharomyces pombe (Spo) SPBC16D10.04c GI:19113291 Q9URU2
Encephalitozoon cuniculi (Ecu) ECU09g1800 GI:19173301


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000784 nuclear chromosome, telomeric region C
IDA
SceS000001207
ISS
SpoSPBC16D10.04c
GO:0005634 nucleus C
IC
SpoSPBC16D10.04c
IDA
CelWBGene00001016
SceS000001207
SpoSPBC16D10.04c
GO:0005737 cytoplasm C
IDA
SceS000001207
GO:0005829 cytosol C
IDA
SpoSPBC16D10.04c
GO:0043596 nuclear replication fork C
IC
SpoSPBC16D10.04c
GO:0000014 single-stranded DNA specific endodeoxyribonuclease
activity		 F
IDA
SceS000001207
GO:0000739 DNA strand annealing activity F
IDA
SceS000001207
GO:0004003 ATP-dependent DNA helicase activity F
IDA
SceS000001207
ISS
AthAt1g08840
SpoSPBC16D10.04c
GO:0004527 exonuclease activity F
TAS
SpoSPBC16D10.04c
GO:0005515 protein binding F
IPI
SpoSPBC16D10.04c
GO:0005524 ATP binding F
ISS
SpoSPBC16D10.04c
GO:0017108 5'-flap endonuclease activity F
IDA
SceS000001207
ISS
SpoSPBC16D10.04c
GO:0042162 telomeric DNA binding F
IDA
SpoSPBC16D10.04c
GO:0000084 S phase of mitotic cell cycle P
IC
SpoSPBC16D10.04c
GO:0000706 meiotic DNA double-strand break
processing		 P
IGI
SceS000001207
GO:0000723 telomere maintenance P
IGI
SpoSPBC16D10.04c
IMP
SceS000001207
GO:0001302 replicative cell aging P
IMP
SceS000001207
GO:0006200 ATP catabolic process P
ISS
SpoSPBC16D10.04c
GO:0006260 DNA replication P
ISS
AthAt1g08840
GO:0006261 DNA-dependent DNA replication P
IDA
SceS000001207
IMP
SceS000001207
GO:0006273 lagging strand elongation P
IGI
SceS000001207
IMP
SceS000001207
GO:0006281 DNA repair P
IGI
SceS000001207
IMP
SceS000001207
ISS
SpoSPBC16D10.04c
GO:0007568 aging P
RCA
SceS000001207
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00001016
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt1g08840
GO:0031860 telomeric 3' overhang formation P
IMP
SpoSPBC16D10.04c
GO:0043137 DNA replication, removal of RNA
primer		 P
IMP
SpoSPBC16D10.04c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117825

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) DNA2
(S000001207)		 GI:6321958 P38859
Kluyveromyces lactis (Kla) KLLA0A05324g GI:50302599
Eremothecium gossypii (Ego) AGOS_AEL218W GI:45190389


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000784 nuclear chromosome, telomeric region C
IDA
SceS000001207
GO:0005634 nucleus C
IDA
SceS000001207
GO:0005737 cytoplasm C
IDA
SceS000001207
GO:0000014 single-stranded DNA specific endodeoxyribonuclease
activity		 F
IDA
SceS000001207
GO:0000739 DNA strand annealing activity F
IDA
SceS000001207
GO:0004003 ATP-dependent DNA helicase activity F
IDA
SceS000001207
GO:0017108 5'-flap endonuclease activity F
IDA
SceS000001207
GO:0000706 meiotic DNA double-strand break
processing		 P
IGI
SceS000001207
GO:0000723 telomere maintenance P
IMP
SceS000001207
GO:0001302 replicative cell aging P
IMP
SceS000001207
GO:0006261 DNA-dependent DNA replication P
IDA
SceS000001207
IMP
SceS000001207
GO:0006273 lagging strand elongation P
IGI
SceS000001207
IMP
SceS000001207
GO:0006281 DNA repair P
IGI
SceS000001207
IMP
SceS000001207
GO:0007568 aging P
RCA
SceS000001207

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2565

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga14427 ENSANGP00000002028
Ashbya gossypii (Ago) ago2288 AEL218W
Arabidopsis thaliana (Ath) ath896 At1g08840.1
Caenorhabditis elegans (Cel) cel9024 F43G6.1a
(CE02219;
WBGene00001016)
Caenorhabditis elegans (Cel) cel9025 F43G6.1b
(CE23725)
Candida glabrata (Cgl) cgl2619 CAGL0I02222g
Cryptococcus neoformans (Cne) cne3197 167.m05852
Dictyostelium discoideum (Ddi) ddi3105 DDB0217467
Debaryomyces hansenii (Dha) dha6034 DEHA0G07469g
Drosophila melanogaster (Dme) dme17206 CG2990-PA
(FBgn0030170)
Drosophila melanogaster (Dme) dme17207 CG2990-PB
(FBgn0030170)
Danio rerio (Dre) dre29053 ENSDARP00000019795
Danio rerio (Dre) dre29054 ENSDARP00000042394
Encephalitozoon cuniculi (Ecu) ecu1452 19173301
Takifugu rubripes (Fru) fru12943 SINFRUP00000157919
Takifugu rubripes (Fru) fru12942 SINFRUP00000165825
Gallus gallus (Gga) gga20327 ENSGALP00000006418
(DNA2L)		 Q5ZKG3
Gallus gallus (Gga) gga20326 ENSGALP00000006419
(DNA2L)
Homo sapiens (Hsa) hsa3997 ENSP00000260916
Homo sapiens (Hsa) hsa3998 ENSP00000349979
Homo sapiens (Hsa) hsa3996 ENSP00000351185
(DNA2)		 P51530-1
Kluyveromyces lactis (Kla) kla232 KLLA0A05324g
Mus musculus (Mmu) mmu2255 ENSMUSP00000020265
Neurospora crassa (Ncr) ncr4614 NCU04749.2
Oryza sativa (Osa) osa45397 5388.m00147
Rattus norvegicus (Rno) rno17842 ENSRNOP00000000438
(RGD:1306791)
Saccharomyces cerevisiae (Sce) sce2935 YHR164C
(S000001207)
Schizosaccharomyces pombe (Spo) spo4932 SPBC16D10.04c Q9URU2
Yarrowia lipolytica (Yli) yli5254 YALI0E33377g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000784 nuclear chromosome, telomeric region C
IDA
SceS000001207
ISS
SpoSPBC16D10.04c
GO:0005634 nucleus C
IC
SpoSPBC16D10.04c
IDA
CelWBGene00001016
SceS000001207
SpoSPBC16D10.04c
GO:0005737 cytoplasm C
IDA
SceS000001207
GO:0005829 cytosol C
IDA
SpoSPBC16D10.04c
GO:0043596 nuclear replication fork C
IC
SpoSPBC16D10.04c
GO:0000014 single-stranded DNA specific endodeoxyribonuclease
activity		 F
IDA
SceS000001207
ISS
DmeFBgn0030170
GO:0000739 DNA strand annealing activity F
IDA
SceS000001207
GO:0004003 ATP-dependent DNA helicase activity F
IDA
SceS000001207
ISS
AthAt1g08840
DmeFBgn0030170
SpoSPBC16D10.04c
GO:0004527 exonuclease activity F
TAS
SpoSPBC16D10.04c
GO:0005515 protein binding F
IPI
SpoSPBC16D10.04c
GO:0005524 ATP binding F
ISS
SpoSPBC16D10.04c
GO:0017108 5'-flap endonuclease activity F
IDA
SceS000001207
ISS
SpoSPBC16D10.04c
GO:0042162 telomeric DNA binding F
IDA
SpoSPBC16D10.04c
GO:0000084 S phase of mitotic cell cycle P
IC
SpoSPBC16D10.04c
GO:0000706 meiotic DNA double-strand break
processing		 P
IGI
SceS000001207
GO:0000723 telomere maintenance P
IGI
SpoSPBC16D10.04c
IMP
SceS000001207
GO:0001302 replicative cell aging P
IMP
SceS000001207
GO:0006200 ATP catabolic process P
ISS
SpoSPBC16D10.04c
GO:0006260 DNA replication P
ISS
AthAt1g08840
GO:0006261 DNA-dependent DNA replication P
IDA
SceS000001207
IMP
SceS000001207
GO:0006273 lagging strand elongation P
IGI
SceS000001207
IMP
SceS000001207
GO:0006281 DNA repair P
IGI
SceS000001207
IMP
SceS000001207
ISS
SpoSPBC16D10.04c
GO:0007568 aging P
RCA
SceS000001207
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00001016
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt1g08840
GO:0031860 telomeric 3' overhang formation P
IMP
SpoSPBC16D10.04c
GO:0043137 DNA replication, removal of RNA
primer		 P
IMP
SpoSPBC16D10.04c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC16D10.04c
(Q9URU2)		 YHR164C
(S000001207)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000784 nuclear chromosome, telomeric region C
IDA
SceS000001207
ISS
SpoSPBC16D10.04c
GO:0005634 nucleus C
IC
SpoSPBC16D10.04c
IDA
SceS000001207
SpoSPBC16D10.04c
GO:0005737 cytoplasm C
IDA
SceS000001207
GO:0005829 cytosol C
IDA
SpoSPBC16D10.04c
GO:0043596 nuclear replication fork C
IC
SpoSPBC16D10.04c
GO:0000014 single-stranded DNA specific endodeoxyribonuclease
activity		 F
IDA
SceS000001207
GO:0000739 DNA strand annealing activity F
IDA
SceS000001207
GO:0004003 ATP-dependent DNA helicase activity F
IDA
SceS000001207
ISS
SpoSPBC16D10.04c
GO:0004527 exonuclease activity F
TAS
SpoSPBC16D10.04c
GO:0005515 protein binding F
IPI
SpoSPBC16D10.04c
GO:0005524 ATP binding F
ISS
SpoSPBC16D10.04c
GO:0017108 5'-flap endonuclease activity F
IDA
SceS000001207
ISS
SpoSPBC16D10.04c
GO:0042162 telomeric DNA binding F
IDA
SpoSPBC16D10.04c
GO:0000084 S phase of mitotic cell cycle P
IC
SpoSPBC16D10.04c
GO:0000706 meiotic DNA double-strand break
processing		 P
IGI
SceS000001207
GO:0000723 telomere maintenance P
IGI
SpoSPBC16D10.04c
IMP
SceS000001207
GO:0001302 replicative cell aging P
IMP
SceS000001207
GO:0006200 ATP catabolic process P
ISS
SpoSPBC16D10.04c
GO:0006261 DNA-dependent DNA replication P
IDA
SceS000001207
IMP
SceS000001207
GO:0006273 lagging strand elongation P
IGI
SceS000001207
IMP
SceS000001207
GO:0006281 DNA repair P
IGI
SceS000001207
IMP
SceS000001207
ISS
SpoSPBC16D10.04c
GO:0007568 aging P
RCA
SceS000001207
GO:0031860 telomeric 3' overhang formation P
IMP
SpoSPBC16D10.04c
GO:0043137 DNA replication, removal of RNA
primer		 P
IMP
SpoSPBC16D10.04c

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

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