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Search term: YHR197W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RIX1
SGD link S000001240
Alternative ID YHR197W
Description Essential component of the Rix1 complex (Rix1p, Ipi1p, Ipi3p) that is required for processing of ITS2 sequences from 35S pre-rRNA; Rix1 complex associates with Mdn1p in pre-60S ribosomal particles
Synonyms YHR197W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39276

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RIX1
(S000001240)		 GI:6321991
Kluyveromyces lactis (Kla) KLLA0B04092g GI:50303549
Eremothecium gossypii (Ego) AGOS_ABL072C GI:45185158


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001240
GO:0005654 nucleoplasm C
IDA
SceS000001240
GO:0003674 molecular_function F
ND
SceS000001240
GO:0000027 ribosomal large subunit assembly P
IMP
SceS000001240
GO:0000054 ribosomal subunit export from nucleus P
IMP
SceS000001240
IPI
SceS000001240
TAS
SceS000001240
GO:0006364 rRNA processing P
IMP
SceS000001240

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_15140

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago520 ABL072C
Candida glabrata (Cgl) cgl778 CAGL0D02706g
Debaryomyces hansenii (Dha) dha1852 DEHA0C09570g
Kluyveromyces lactis (Kla) kla714 KLLA0B04092g
Neurospora crassa (Ncr) ncr57 NCU00059.2
Saccharomyces cerevisiae (Sce) sce2974 YHR197W
(S000001240)
Schizosaccharomyces pombe (Spo) spo2577 SPCC4G3.18 P87243
Yarrowia lipolytica (Yli) yli6197 YALI0F20350g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001240
SpoSPCC4G3.18
ISS
SpoSPCC4G3.18
GO:0005654 nucleoplasm C
IDA
SceS000001240
GO:0005816 spindle pole body C
IDA
SpoSPCC4G3.18
GO:0003674 molecular_function F
ND
SceS000001240
SpoSPCC4G3.18
GO:0000027 ribosomal large subunit assembly P
IMP
SceS000001240
ISS
SpoSPCC4G3.18
GO:0000054 ribosomal subunit export from nucleus P
IMP
SceS000001240
IPI
SceS000001240
ISS
SpoSPCC4G3.18
TAS
SceS000001240
GO:0006364 rRNA processing P
IMP
SceS000001240
ISS
SpoSPCC4G3.18

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC4G3.18
(P87243)		 YHR197W
(S000001240)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001240
SpoSPCC4G3.18
ISS
SpoSPCC4G3.18
GO:0005654 nucleoplasm C
IDA
SceS000001240
GO:0005816 spindle pole body C
IDA
SpoSPCC4G3.18
GO:0003674 molecular_function F
ND
SceS000001240
SpoSPCC4G3.18
GO:0000027 ribosomal large subunit assembly P
IMP
SceS000001240
ISS
SpoSPCC4G3.18
GO:0000054 ribosomal subunit export from nucleus P
IMP
SceS000001240
IPI
SceS000001240
ISS
SpoSPCC4G3.18
TAS
SceS000001240
GO:0006364 rRNA processing P
IMP
SceS000001240
ISS
SpoSPCC4G3.18

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