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Search term: YIL008W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name URM1
SGD link S000001270
Alternative ID YIL008W
Description Ubiquitin-like protein with weak sequence similarity to ubiquitin; depends on the E1-like activating enzyme Uba4p; molecular function of the Urm1p pathway is unknown, but it is required for normal growth, particularly at high temperature
Synonyms YIL008W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4146 ---HYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Ubiquitin-like protein

Species KOG link NCBI link UniProt link
Homo sapiens (Hsa) Hs13569870
(URM1)		 GI:13569870 Q9BTM9
Saccharomyces cerevisiae (Sce) YIL008w
(S000001270)		 GI:6322183 P40554
Schizosaccharomyces pombe (Spo) SPCC548.04 GI:19075244 Q9P3U9
Encephalitozoon cuniculi (Ecu) ECU03g0800 GI:19173038 Q8SW42


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001270
SpoSPCC548.04
ISS
SpoSPCC548.04
GO:0005737 cytoplasm C
IDA
SceS000001270
ISS
SpoSPCC548.04
GO:0005829 cytosol C
IC
HsaURM1
IDA
SpoSPCC548.04
GO:0005515 protein binding F
IPI
HsaURM1
GO:0016783 sulfurtransferase activity F
IDA
HsaURM1
GO:0031386 protein tag F
IDA
SceS000001270
IMP
SceS000001270
ISS
SpoSPCC548.04
GO:0001403 invasive growth in response to glucose
limitation		 P
IGI
SceS000001270
IMP
SceS000001270
GO:0002098 tRNA wobble uridine modification P
IMP
HsaURM1
SceS000001270
GO:0002143 wobble position uridine thiolation P
IMP
SceS000001270
GO:0007114 cell budding P
IGI
SceS000001270
GO:0032447 protein urmylation P
IDA
SceS000001270
ISS
SpoSPCC548.04
GO:0034227 tRNA thio-modification P
IMP
HsaURM1
SceS000001270
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000001270

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39343

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) URM1
(S000001270)		 GI:6322183 P40554
Kluyveromyces lactis (Kla) KLLA0D14157g GI:50307433
Eremothecium gossypii (Ego) AGOS_ADL014W GI:45187860


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001270
GO:0005737 cytoplasm C
IDA
SceS000001270
GO:0031386 protein tag F
IDA
SceS000001270
IMP
SceS000001270
GO:0001403 invasive growth in response to glucose
limitation		 P
IGI
SceS000001270
IMP
SceS000001270
GO:0002098 tRNA wobble uridine modification P
IMP
SceS000001270
GO:0002143 wobble position uridine thiolation P
IMP
SceS000001270
GO:0007114 cell budding P
IGI
SceS000001270
GO:0032447 protein urmylation P
IDA
SceS000001270
GO:0034227 tRNA thio-modification P
IMP
SceS000001270
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000001270

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3438

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga1268 ENSANGP00000017452
Ashbya gossypii (Ago) ago1728 ADL014W
Candida glabrata (Cgl) cgl581 CAGL0C03784g
Dictyostelium discoideum (Ddi) ddi4875 DDB0185658
Debaryomyces hansenii (Dha) dha1365 DEHA0B15631g
Drosophila melanogaster (Dme) dme8418 CG33276-PA
(FBgn0053276)
Encephalitozoon cuniculi (Ecu) ecu445 19173038
Gallus gallus (Gga) gga8089 ENSGALP00000007958
(URM1)		 Q5ZJU4
Homo sapiens (Hsa) hsa31988 ENSP00000300461
Kluyveromyces lactis (Kla) kla2694 KLLA0D14157g
Mus musculus (Mmu) mmu31306 ENSMUSP00000076465
Mus musculus (Mmu) mmu14346 ENSMUSP00000077743
Neurospora crassa (Ncr) ncr4053 NCU04177.2
Oryza sativa (Osa) osa76419 7260.m00167
Plasmodium falciparum (Pfa) pfa843 PF11_0393
Rattus norvegicus (Rno) rno18329 ENSRNOP00000032608
(RGD:1306599)		 B6ID11
Saccharomyces cerevisiae (Sce) sce3016 YIL008W
(S000001270)
Schizosaccharomyces pombe (Spo) spo1404 SPCC548.04 Q9P3U9


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
PfaPF11_0393
GO:0005576 extracellular region C
ISS
DmeFBgn0053276
GO:0005634 nucleus C
IDA
SceS000001270
SpoSPCC548.04
ISS
SpoSPCC548.04
GO:0005737 cytoplasm C
IDA
SceS000001270
ISS
SpoSPCC548.04
GO:0005829 cytosol C
IDA
SpoSPCC548.04
GO:0003674 molecular_function F
ND
PfaPF11_0393
GO:0004252 serine-type endopeptidase activity F
ISS
DmeFBgn0053276
GO:0031386 protein tag F
IDA
SceS000001270
IMP
SceS000001270
ISS
SpoSPCC548.04
GO:0001403 invasive growth in response to glucose
limitation		 P
IGI
SceS000001270
IMP
SceS000001270
GO:0002098 tRNA wobble uridine modification P
IMP
SceS000001270
GO:0002143 wobble position uridine thiolation P
IMP
SceS000001270
GO:0006508 proteolysis P
ISS
DmeFBgn0053276
GO:0007114 cell budding P
IGI
SceS000001270
GO:0008150 biological_process P
ND
PfaPF11_0393
GO:0032447 protein urmylation P
IDA
SceS000001270
ISS
SpoSPCC548.04
GO:0034227 tRNA thio-modification P
IMP
SceS000001270
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000001270

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC548.04
(Q9P3U9)		 YIL008W
(S000001270)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001270
SpoSPCC548.04
ISS
SpoSPCC548.04
GO:0005737 cytoplasm C
IDA
SceS000001270
ISS
SpoSPCC548.04
GO:0005829 cytosol C
IDA
SpoSPCC548.04
GO:0031386 protein tag F
IDA
SceS000001270
IMP
SceS000001270
ISS
SpoSPCC548.04
GO:0001403 invasive growth in response to glucose
limitation		 P
IGI
SceS000001270
IMP
SceS000001270
GO:0002098 tRNA wobble uridine modification P
IMP
SceS000001270
GO:0002143 wobble position uridine thiolation P
IMP
SceS000001270
GO:0007114 cell budding P
IGI
SceS000001270
GO:0032447 protein urmylation P
IDA
SceS000001270
ISS
SpoSPCC548.04
GO:0034227 tRNA thio-modification P
IMP
SceS000001270
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000001270

Back to the top
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