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Search term: YIL018W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPL2B
SGD link S000001280
Alternative ID YIL018W
Description Protein component of the large (60S) ribosomal subunit, identical to Rpl2Ap and has similarity to E. coli L2 and rat L8 ribosomal proteins; expression is upregulated at low temperatures
Synonyms YIL018W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2309 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 60s ribosomal protein L2/L8

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g18020 GI:15227954
Arabidopsis thaliana (Ath) At3g51190 GI:15230421
Arabidopsis thaliana (Ath) At4g14250_2 GI:15236456
Arabidopsis thaliana (Ath) At4g36130 GI:15234298
Caenorhabditis elegans (Cel) CE18478
(WBGene00004413)		 GI:17557310 Q9XVF7
Caenorhabditis elegans (Cel) CE18483_2 GI:17557320
Drosophila melanogaster (Dme) 7292250
(FBgn0024939)		 GI:17864318
Homo sapiens (Hsa) Hs17444499 GI:17444499
Homo sapiens (Hsa) Hs17459950 GI:17459950
Homo sapiens (Hsa) Hs20556598 GI:20556598
Homo sapiens (Hsa) Hs4506663
(RPL8)		 GI:4506663 P62917
Saccharomyces cerevisiae (Sce) YFR031c-a
(S000002104)		 GI:6322171 P05736
Saccharomyces cerevisiae (Sce) YIL018w
(S000001280)		 GI:6322171 P05736
Schizosaccharomyces pombe (Spo) SPBC2F12.07c GI:19112036 P08093
Schizosaccharomyces pombe (Spo) SPBC839.04 GI:19112036 P08093
Encephalitozoon cuniculi (Ecu) ECU01g0310 GI:19075040


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC839.04
GO:0005730 nucleolus C
IDA
AthAt2g18020
GO:0005773 vacuole C
IDA
AthAt4g36130
At2g18020
GO:0005829 cytosol C
EXP
HsaRPL8
IDA
SpoSPBC839.04
GO:0005840 ribosome C
ISS
AthAt4g36130
At2g18020
At3g51190
GO:0005886 plasma membrane C
IDA
AthAt4g36130
At2g18020
GO:0009507 chloroplast C
IDA
AthAt2g18020
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt3g51190
At2g18020
At4g36130
SceS000002104
S000001280
ISS
SpoSPBC839.04
SPBC2F12.07c
TAS
HsaRPL8
GO:0022626 cytosolic ribosome C
IDA
AthAt3g51190
At2g18020
At4g36130
GO:0003723 RNA binding F
TAS
HsaRPL8
GO:0003735 structural constituent of ribosome F
IDA
SceS000002104
S000001280
ISS
AthAt3g51190
At2g18020
At4g36130
SpoSPBC2F12.07c
SPBC839.04
GO:0005515 protein binding F
IPI
AthAt2g18020
GO:0019843 rRNA binding F
ISS
SpoSPBC839.04
SPBC2F12.07c
GO:0000003 reproduction P
IMP
CelWBGene00004413
GO:0002119 nematode larval development P
IMP
CelWBGene00004413
GO:0006412 translation P
IDA
SceS000002104
S000001280
ISS
AthAt3g51190
At4g36130
At2g18020
SpoSPBC2F12.07c
SPBC839.04
TAS
HsaRPL8
GO:0006414 translational elongation P
EXP
HsaRPL8
GO:0006417 regulation of translation P
RCA
SceS000002104
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004413
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt2g18020
GO:0040007 growth P
IMP
CelWBGene00004413
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004413
GO:0040011 locomotion P
IMP
CelWBGene00004413

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
32141

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPL8 GI:4506663 P62917
Pan troglodytes (Ptr) RPL8 GI:114622235
Canis familiaris (Cfa) RPL8 GI:73974792
Rattus norvegicus (Rno) RGD1561333 GI:62642484
Gallus gallus (Gga) RPL8 GI:118083996
Drosophila melanogaster (Dme) RpL8
(FBgn0024939)		 GI:17864318
Anopheles gambiae (Aga) AgaP_AGAP005802 GI:58387796
Caenorhabditis elegans (Cel) rpl-2
(CE18478;
WBGene00004413)		 GI:17557310 Q9XVF7
Schizosaccharomyces pombe (Spo) rpl18 GI:68000877
Schizosaccharomyces pombe (Spo) rpk37 GI:19112501
Schizosaccharomyces pombe (Spo) rpk5-b GI:19112036
Saccharomyces cerevisiae (Sce) RPL2B
(S000001280)		 GI:6322171 P05736
Saccharomyces cerevisiae (Sce) RPL2A
(S000002104)		 GI:14318555
Kluyveromyces lactis (Kla) KLLA0D16027g GI:50307573
Eremothecium gossypii (Ego) AGOS_ADL127C GI:45187746
Magnaporthe grisea (Mgr) MGG_06269 GI:145608910
Neurospora crassa (Ncr) NCU00413.1 GI:32403772
Arabidopsis thaliana (Ath) EMB2296 GI:15227954
Arabidopsis thaliana (Ath) AT4G36130 GI:15234298
Oryza sativa (Osa) Os12g0567700 GI:115489150
Plasmodium falciparum (Pfa) PFE0845c GI:124506257


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
AthEMB2296
GO:0005773 vacuole C
IDA
AthEMB2296
At4g36130
GO:0005829 cytosol C
EXP
HsaRPL8
GO:0005840 ribosome C
ISS
AthAt4g36130
EMB2296
GO:0005886 plasma membrane C
IDA
AthAt4g36130
EMB2296
GO:0009507 chloroplast C
IDA
AthEMB2296
GO:0015934 large ribosomal subunit C
ISS
PfaPFE0845c
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthEMB2296
At4g36130
SceS000002104
S000001280
TAS
HsaRPL8
GO:0022626 cytosolic ribosome C
IDA
AthAt4g36130
EMB2296
GO:0003723 RNA binding F
TAS
HsaRPL8
GO:0003735 structural constituent of ribosome F
IDA
SceS000002104
S000001280
ISS
AthAt4g36130
EMB2296
GO:0005515 protein binding F
IPI
AthEMB2296
GO:0000003 reproduction P
IMP
CelWBGene00004413
GO:0002119 nematode larval development P
IMP
CelWBGene00004413
GO:0006412 translation P
IDA
SceS000002104
S000001280
ISS
AthEMB2296
At4g36130
TAS
HsaRPL8
GO:0006414 translational elongation P
EXP
HsaRPL8
GO:0006417 regulation of translation P
RCA
SceS000002104
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004413
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthEMB2296
GO:0040007 growth P
IMP
CelWBGene00004413
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004413
GO:0040011 locomotion P
IMP
CelWBGene00004413

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_956

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga1237 ENSANGP00000010416
Ashbya gossypii (Ago) ago1614 ADL127C
Arabidopsis thaliana (Ath) ath8652 At2g18020.1
Arabidopsis thaliana (Ath) ath16436 At3g51190.1
Arabidopsis thaliana (Ath) ath21783 At4g36130.1
Caenorhabditis elegans (Cel) cel231 B0250.1
(CE18478;
WBGene00004413)
Caenorhabditis elegans (Cel) cel234 B0250.3
Candida glabrata (Cgl) cgl3090 CAGL0J02354g
Dictyostelium discoideum (Ddi) ddi11648 DDB0185202
Debaryomyces hansenii (Dha) dha1353 DEHA0B15389g
Debaryomyces hansenii (Dha) dha2889 DEHA0D13244g
Drosophila melanogaster (Dme) dme7617 CG1263-PA
(FBgn0024939)
Drosophila melanogaster (Dme) dme7618 CG1263-PB
(FBgn0024939)
Danio rerio (Dre) dre23820 ENSDARP00000005651
(rpl8)		 Q6P0V6
Encephalitozoon cuniculi (Ecu) ecu1677 19075040
Takifugu rubripes (Fru) fru28648 SINFRUP00000135734
Gallus gallus (Gga) gga2264 ENSGALP00000026126
(RPL8)
Homo sapiens (Hsa) hsa30920 ENSP00000262584
(RPL8)		 P62917
Kluyveromyces lactis (Kla) kla2765 KLLA0D16027g
Mus musculus (Mmu) mmu9222 ENSMUSP00000004072
(MGI:1350927)		 P62918
Neurospora crassa (Ncr) ncr399 NCU00413.2
Oryza sativa (Osa) osa77015 7422.m00179
Plasmodium falciparum (Pfa) pfa3618 PFE0845c
Rattus norvegicus (Rno) rno27324 ENSRNOP00000005960
(RGD:619827)		 P62919
Rattus norvegicus (Rno) rno18202 ENSRNOP00000046553
(RGD:619827)		 P62919
Rattus norvegicus (Rno) rno4260 ENSRNOP00000047328
(RGD:1561333)
Saccharomyces cerevisiae (Sce) sce2058 YFR031C-A
(S000002104)
Saccharomyces cerevisiae (Sce) sce3028 YIL018W
(S000001280)
Schizosaccharomyces pombe (Spo) spo1906 SPAC1F7.13c P08093
Schizosaccharomyces pombe (Spo) spo1849 SPBC2F12.07c P08093
Schizosaccharomyces pombe (Spo) spo194 SPBC839.04 P08093
Yarrowia lipolytica (Yli) yli6381 YALI0F24739g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1350927
GO:0005634 nucleus C
IDA
SpoSPBC839.04
GO:0005730 nucleolus C
IDA
AthAt2g18020
GO:0005773 vacuole C
IDA
AthAt4g36130
At2g18020
GO:0005829 cytosol C
IDA
SpoSPBC839.04
SPAC1F7.13c
GO:0005840 ribosome C
ISS
AthAt4g36130
At2g18020
At3g51190
GO:0005886 plasma membrane C
IDA
AthAt4g36130
At2g18020
GO:0009507 chloroplast C
IDA
AthAt2g18020
GO:0015934 large ribosomal subunit C
ISS
PfaPFE0845c
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt3g51190
At2g18020
At4g36130
SceS000002104
S000001280
ISS
SpoSPBC839.04
SPBC2F12.07c
SPAC1F7.13c
GO:0022626 cytosolic ribosome C
IDA
AthAt3g51190
At2g18020
At4g36130
GO:0003674 molecular_function F
ND
MmuMGI:1350927
GO:0003735 structural constituent of ribosome F
IDA
SceS000002104
S000001280
ISS
AthAt3g51190
At2g18020
At4g36130
SpoSPBC2F12.07c
SPBC839.04
SPAC1F7.13c
GO:0005515 protein binding F
IPI
AthAt2g18020
GO:0019843 rRNA binding F
ISS
SpoSPBC839.04
SPBC2F12.07c
SPAC1F7.13c
GO:0000003 reproduction P
IMP
CelWBGene00004413
B0250.3
GO:0002119 nematode larval development P
IMP
CelWBGene00004413
B0250.3
GO:0006412 translation P
IDA
SceS000002104
S000001280
ISS
AthAt3g51190
At4g36130
At2g18020
SpoSPBC2F12.07c
SPBC839.04
SPAC1F7.13c
GO:0006417 regulation of translation P
RCA
SceS000002104
GO:0008150 biological_process P
ND
MmuMGI:1350927
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004413
B0250.3
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt2g18020
GO:0040007 growth P
IMP
CelWBGene00004413
B0250.3
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004413
B0250.3
GO:0040011 locomotion P
IMP
CelWBGene00004413
B0250.3

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC839.04
(P08093)		 YIL018W
(S000001280)
SPBC2F12.07c
(P08093)		 YIL018W
(S000001280)
SPAC1F7.13c
(P08093)		 YIL018W
(S000001280)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC839.04
GO:0005829 cytosol C
IDA
SpoSPBC839.04
SPAC1F7.13c
GO:0022625 cytosolic large ribosomal subunit C
IDA
SceS000001280
ISS
SpoSPBC839.04
SPBC2F12.07c
SPAC1F7.13c
GO:0003735 structural constituent of ribosome F
IDA
SceS000001280
ISS
SpoSPBC2F12.07c
SPBC839.04
SPAC1F7.13c
GO:0019843 rRNA binding F
ISS
SpoSPBC839.04
SPBC2F12.07c
SPAC1F7.13c
GO:0006412 translation P
IDA
SceS000001280
ISS
SpoSPBC2F12.07c
SPBC839.04
SPAC1F7.13c

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