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Search term: YIL079C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name AIR1
SGD link S000001341
Alternative ID YIL079C
Description Zinc knuckle protein, involved in nuclear RNA processing and degradation as a component of the TRAMP complex; stimulates the poly(A) polymerase activity of Pap2p in vitro; functionally redundant with Air2p
Synonyms YIL079C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4400 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING E3 ubiquitin ligase interacting with arginine methyltransferase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g12880 GI:15224897
Arabidopsis thaliana (Ath) At3g42860 GI:15229170
Arabidopsis thaliana (Ath) At3g43490 GI:15229296
Arabidopsis thaliana (Ath) At3g43590 GI:15229721
Arabidopsis thaliana (Ath) At5g36240 GI:15239349
Arabidopsis thaliana (Ath) At5g52380 GI:15237136
Caenorhabditis elegans (Cel) CE21045
(WBGene00019537)		 GI:17541342
Caenorhabditis elegans (Cel) CE27916
(WBGene00017210)		 GI:17532917 P91223
Drosophila melanogaster (Dme) 7291506 GI:7291506
Drosophila melanogaster (Dme) 7294049 GI:7294049
Homo sapiens (Hsa) Hs14150027 GI:14150027 Q8N567
Homo sapiens (Hsa) Hs14994312_2 GI:14994312
Homo sapiens (Hsa) Hs20552876 GI:20552876
Homo sapiens (Hsa) Hs20562413_3 GI:20562413
Homo sapiens (Hsa) Hs22045627_2 GI:22045627
Homo sapiens (Hsa) Hs4827071 GI:4827071 Q6T598
Homo sapiens (Hsa) Hs8923260 GI:8923260
Saccharomyces cerevisiae (Sce) YDL175c
(S000002334)		 GI:6320026 Q12476
Saccharomyces cerevisiae (Sce) YIL079c
(S000001341)		 GI:6322111 P40507
Saccharomyces cerevisiae (Sce) YNL255c
(S000005199)		 GI:6324074 P53849
Schizosaccharomyces pombe (Spo) SPAC13D6.02c GI:19114592 P36627
Schizosaccharomyces pombe (Spo) SPAC683.02c GI:19115393 Q9HFF2
Schizosaccharomyces pombe (Spo) SPBP35G2.08c GI:19112175 Q9P795
Encephalitozoon cuniculi (Ecu) ECU11g0650 GI:19074865 Q8SU59


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g36240
At3g43490
At2g12880
At3g42860
At5g52380
GO:0005634 nucleus C
ISS
SpoSPBP35G2.08c
GO:0005730 nucleolus C
IDA
SceS000001341
S000002334
SpoSPAC683.02c
SPAC13D6.02c
ISS
SpoSPBP35G2.08c
GO:0005737 cytoplasm C
IDA
SceS000005199
GO:0005829 cytosol C
IDA
SpoSPAC13D6.02c
GO:0031499 TRAMP complex C
IDA
SceS000001341
S000002334
SpoSPBP35G2.08c
GO:0003674 molecular_function F
ND
SceS000005199
GO:0003676 nucleic acid binding F
ISS
AthAt3g43590
At3g43490
At5g36240
At5g52380
At3g42860
At2g12880
GO:0003700 transcription factor activity F
IDA
AthAt5g52380
GO:0004652 polynucleotide adenylyltransferase
activity		 F
IDA
SceS000002334
S000001341
IGI
SceS000001341
S000002334
GO:0000003 reproduction P
IMP
CelWBGene00017210
WBGene00019537
GO:0000747 conjugation with cellular fusion P
IMP
SpoSPAC13D6.02c
GO:0002119 nematode larval development P
IMP
CelWBGene00019537
GO:0006399 tRNA metabolic process P
RCA
SceS000001341
GO:0006406 mRNA export from nucleus P
ISS
SpoSPBP35G2.08c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00017210
GO:0008150 biological_process P
ND
AthAt3g43490
At5g36240
At3g42860
At2g12880
SpoSPAC683.02c
GO:0009415 response to water P
RCA
SceS000005199
GO:0009451 RNA modification P
RCA
SceS000001341
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00019537
GO:0010089 xylem development P
IMP
AthAt5g52380
GO:0016073 snRNA metabolic process P
RCA
SceS000001341
S000002334
GO:0016075 rRNA catabolic process P
ISS
SpoSPBP35G2.08c
GO:0016076 snRNA catabolic process P
ISS
SpoSPBP35G2.08c
GO:0016077 snoRNA catabolic process P
ISS
SpoSPBP35G2.08c
GO:0016078 tRNA catabolic process P
ISS
SpoSPBP35G2.08c
GO:0018193 peptidyl-amino acid modification P
RCA
SceS000001341
GO:0023034 intracellular signaling pathway P
IGI
SceS000005199
GO:0031137 regulation of conjugation with cellular
fusion		 P
IGI
SpoSPAC13D6.02c
GO:0040007 growth P
IMP
CelWBGene00019537
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00017210
GO:0040011 locomotion P
IMP
CelWBGene00019537
WBGene00017210
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00017210
GO:0043629 ncRNA polyadenylation P
IDA
SceS000002334
S000001341
GO:0043630 ncRNA polyadenylation involved in
polyadenylation-dependent ncRNA catabolic
process		 P
ISS
SpoSPBP35G2.08c
GO:0051049 regulation of transport P
RCA
SceS000001341
GO:0071031 nuclear mRNA surveillance of mRNA 3'-end
processing		 P
IGI
SceS000002334
S000001341
GO:0071035 nuclear polyadenylation-dependent rRNA catabolic
process		 P
IGI
SceS000002334
S000001341
GO:0071036 nuclear polyadenylation-dependent snoRNA catabolic
process		 P
IGI
SceS000002334
S000001341
GO:0071037 nuclear polyadenylation-dependent snRNA catabolic
process		 P
IGI
SceS000002334
S000001341
GO:0071038 nuclear polyadenylation-dependent tRNA catabolic
process		 P
IDA
SceS000001341
S000002334
GO:0071039 nuclear polyadenylation-dependent CUT catabolic
process		 P
IGI
SceS000002334
S000001341

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5535

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) AIR1
(S000001341)		 GI:6322111 P40507
Kluyveromyces lactis (Kla) KLLA0F05896g GI:50310651
Eremothecium gossypii (Ego) AGOS_ACL040C GI:45185648


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SceS000001341
GO:0031499 TRAMP complex C
IDA
SceS000001341
GO:0004652 polynucleotide adenylyltransferase
activity		 F
IDA
SceS000001341
IGI
SceS000001341
GO:0006399 tRNA metabolic process P
RCA
SceS000001341
GO:0009451 RNA modification P
RCA
SceS000001341
GO:0016073 snRNA metabolic process P
RCA
SceS000001341
GO:0018193 peptidyl-amino acid modification P
RCA
SceS000001341
GO:0043629 ncRNA polyadenylation P
IDA
SceS000001341
GO:0051049 regulation of transport P
RCA
SceS000001341
GO:0071031 nuclear mRNA surveillance of mRNA 3'-end
processing		 P
IGI
SceS000001341
GO:0071035 nuclear polyadenylation-dependent rRNA catabolic
process		 P
IGI
SceS000001341
GO:0071036 nuclear polyadenylation-dependent snoRNA catabolic
process		 P
IGI
SceS000001341
GO:0071037 nuclear polyadenylation-dependent snRNA catabolic
process		 P
IGI
SceS000001341
GO:0071038 nuclear polyadenylation-dependent tRNA catabolic
process		 P
IDA
SceS000001341
GO:0071039 nuclear polyadenylation-dependent CUT catabolic
process		 P
IGI
SceS000001341

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_5614

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago1009 ACL040C
Candida glabrata (Cgl) cgl3135 CAGL0J03388g
Candida glabrata (Cgl) cgl3405 CAGL0J09460g
Cryptococcus neoformans (Cne) cne2624 181.m08850
Debaryomyces hansenii (Dha) dha1204 DEHA0B12144g
Danio rerio (Dre) dre477 ENSDARP00000038514
(zcchc7l)		 Q8JHG0
Encephalitozoon cuniculi (Ecu) ecu953 19074865
Gallus gallus (Gga) gga24024 ENSGALP00000008710
(ZCCHC7)
Homo sapiens (Hsa) hsa31270 ENSP00000337839
(ZCCHC7)		 Q8N3Z6-1
Homo sapiens (Hsa) hsa31268 ENSP00000351919
(ZCCHC7)		 Q05DN1
Kluyveromyces lactis (Kla) kla4347 KLLA0F05896g
Mus musculus (Mmu) mmu18065 ENSMUSP00000038134
Neurospora crassa (Ncr) ncr4485 NCU04617.2
Rattus norvegicus (Rno) rno23062 ENSRNOP00000017707
(RGD:1310467)		 B1WC15
Saccharomyces cerevisiae (Sce) sce953 YDL175C
(S000002334)
Saccharomyces cerevisiae (Sce) sce3098 YIL079C
(S000001341)
Schizosaccharomyces pombe (Spo) spo4567 SPBP35G2.08c Q9P795
Yarrowia lipolytica (Yli) yli568 YALI0A17292g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
ISS
SpoSPBP35G2.08c
GO:0005730 nucleolus C
IDA
SceS000001341
S000002334
ISS
SpoSPBP35G2.08c
GO:0031499 TRAMP complex C
IDA
SceS000001341
S000002334
SpoSPBP35G2.08c
GO:0004652 polynucleotide adenylyltransferase
activity		 F
IDA
SceS000002334
S000001341
IGI
SceS000001341
S000002334
GO:0006399 tRNA metabolic process P
RCA
SceS000001341
GO:0006406 mRNA export from nucleus P
ISS
SpoSPBP35G2.08c
GO:0009451 RNA modification P
RCA
SceS000001341
GO:0016073 snRNA metabolic process P
RCA
SceS000001341
S000002334
GO:0016075 rRNA catabolic process P
ISS
SpoSPBP35G2.08c
GO:0016076 snRNA catabolic process P
ISS
SpoSPBP35G2.08c
GO:0016077 snoRNA catabolic process P
ISS
SpoSPBP35G2.08c
GO:0016078 tRNA catabolic process P
ISS
SpoSPBP35G2.08c
GO:0018193 peptidyl-amino acid modification P
RCA
SceS000001341
GO:0043629 ncRNA polyadenylation P
IDA
SceS000002334
S000001341
GO:0043630 ncRNA polyadenylation involved in
polyadenylation-dependent ncRNA catabolic
process		 P
ISS
SpoSPBP35G2.08c
GO:0051049 regulation of transport P
RCA
SceS000001341
GO:0071031 nuclear mRNA surveillance of mRNA 3'-end
processing		 P
IGI
SceS000002334
S000001341
GO:0071035 nuclear polyadenylation-dependent rRNA catabolic
process		 P
IGI
SceS000002334
S000001341
GO:0071036 nuclear polyadenylation-dependent snoRNA catabolic
process		 P
IGI
SceS000002334
S000001341
GO:0071037 nuclear polyadenylation-dependent snRNA catabolic
process		 P
IGI
SceS000002334
S000001341
GO:0071038 nuclear polyadenylation-dependent tRNA catabolic
process		 P
IDA
SceS000001341
S000002334
GO:0071039 nuclear polyadenylation-dependent CUT catabolic
process		 P
IGI
SceS000002334
S000001341

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBP35G2.08c
(Q9P795)		 YIL079C
(S000001341)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
ISS
SpoSPBP35G2.08c
GO:0005730 nucleolus C
IDA
SceS000001341
ISS
SpoSPBP35G2.08c
GO:0031499 TRAMP complex C
IDA
SceS000001341
SpoSPBP35G2.08c
GO:0004652 polynucleotide adenylyltransferase
activity		 F
IDA
SceS000001341
IGI
SceS000001341
GO:0006399 tRNA metabolic process P
RCA
SceS000001341
GO:0006406 mRNA export from nucleus P
ISS
SpoSPBP35G2.08c
GO:0009451 RNA modification P
RCA
SceS000001341
GO:0016073 snRNA metabolic process P
RCA
SceS000001341
GO:0016075 rRNA catabolic process P
ISS
SpoSPBP35G2.08c
GO:0016076 snRNA catabolic process P
ISS
SpoSPBP35G2.08c
GO:0016077 snoRNA catabolic process P
ISS
SpoSPBP35G2.08c
GO:0016078 tRNA catabolic process P
ISS
SpoSPBP35G2.08c
GO:0018193 peptidyl-amino acid modification P
RCA
SceS000001341
GO:0043629 ncRNA polyadenylation P
IDA
SceS000001341
GO:0043630 ncRNA polyadenylation involved in
polyadenylation-dependent ncRNA catabolic
process		 P
ISS
SpoSPBP35G2.08c
GO:0051049 regulation of transport P
RCA
SceS000001341
GO:0071031 nuclear mRNA surveillance of mRNA 3'-end
processing		 P
IGI
SceS000001341
GO:0071035 nuclear polyadenylation-dependent rRNA catabolic
process		 P
IGI
SceS000001341
GO:0071036 nuclear polyadenylation-dependent snoRNA catabolic
process		 P
IGI
SceS000001341
GO:0071037 nuclear polyadenylation-dependent snRNA catabolic
process		 P
IGI
SceS000001341
GO:0071038 nuclear polyadenylation-dependent tRNA catabolic
process		 P
IDA
SceS000001341
GO:0071039 nuclear polyadenylation-dependent CUT catabolic
process		 P
IGI
SceS000001341

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