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KOG name | Phylogenetic pattern (and link to KOGs with this pattern) |
KOG4466 | --DHYP-![]() |
KOGs classification | KOGs description |
CELLULAR PROCESSES AND SIGNALINGINFORMATION STORAGE AND PROCESSING | Component of histone deacetylase complex (breast carcinoma metastasis suppressor 1 protein in human) |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||||||
GO:0032221 | Rpd3S complex | C |
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GO:0033698 | Rpd3L complex | C |
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GO:0070210 | Rpd3L-Expanded complex | C |
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GO:0003674 | molecular_function | F |
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GO:0004407 | histone deacetylase activity | F |
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GO:0006338 | chromatin remodeling | P |
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GO:0006342 | chromatin silencing | P |
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GO:0010552 | positive regulation of gene-specific transcription from RNA polymerase II promoter | P |
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GO:0016481 | negative regulation of transcription | P |
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GO:0016575 | histone deacetylation | P |
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GO:0031939 | negative regulation of chromatin silencing at telomere | P |
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HomoloGene cluster | Phylogenetic pattern |
39315 | ![]() |
Species | Gene ID | NCBI link | UniProt link |
Saccharomyces cerevisiae (Sce) | SDS3 (S000001346) | GI:6322107 | P40505 |
Kluyveromyces lactis (Kla) | KLLA0E08657g | GI:50308675 | |
Eremothecium gossypii (Ego) | AGOS_ADL200C | GI:45187673 |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0033698 | Rpd3L complex | C |
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GO:0070210 | Rpd3L-Expanded complex | C |
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GO:0004407 | histone deacetylase activity | F |
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GO:0006342 | chromatin silencing | P |
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GO:0010552 | positive regulation of gene-specific transcription from RNA polymerase II promoter | P |
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GO:0016481 | negative regulation of transcription | P |
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GO:0016575 | histone deacetylation | P |
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GO:0031939 | negative regulation of chromatin silencing at telomere | P |
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OrthoMCL cluster | Phylogenetic pattern |
OG1_20787 | ![]() |
Species | OrthoMCL sequence | Model organism protein page | UniProt link |
Ashbya gossypii (Ago) | ago1541 | ADL200C | |
Candida glabrata (Cgl) | cgl4949 | CAGL0M06699g | |
Debaryomyces hansenii (Dha) | dha485 | DEHA0A10824g | |
Kluyveromyces lactis (Kla) | kla3340 | KLLA0E08657g | |
Saccharomyces cerevisiae (Sce) | sce3103 | YIL084C (S000001346) | |
Yarrowia lipolytica (Yli) | yli6417 | YALI0F25663g |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0033698 | Rpd3L complex | C |
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GO:0070210 | Rpd3L-Expanded complex | C |
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GO:0004407 | histone deacetylase activity | F |
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GO:0006342 | chromatin silencing | P |
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GO:0010552 | positive regulation of gene-specific transcription from RNA polymerase II promoter | P |
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GO:0016481 | negative regulation of transcription | P |
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GO:0016575 | histone deacetylation | P |
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GO:0031939 | negative regulation of chromatin silencing at telomere | P |
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Curated yeast ortholog results:
S. pombe systematic ID | S. cerevisiae systematic ID |
SPAC25B8.02 (Q9UTB6) | YIL084C (S000001346) |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||||||
GO:0032221 | Rpd3S complex | C |
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GO:0033698 | Rpd3L complex | C |
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GO:0070210 | Rpd3L-Expanded complex | C |
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GO:0003674 | molecular_function | F |
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GO:0004407 | histone deacetylase activity | F |
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GO:0006338 | chromatin remodeling | P |
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GO:0006342 | chromatin silencing | P |
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GO:0010552 | positive regulation of gene-specific transcription from RNA polymerase II promoter | P |
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GO:0016481 | negative regulation of transcription | P |
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GO:0016575 | histone deacetylation | P |
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GO:0031939 | negative regulation of chromatin silencing at telomere | P |
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s.khadayate@ucl.ac.uk |