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Search term: YIR012W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SQT1
SGD link S000001451
Alternative ID YIR012W
Description Essential protein involved in a late step of 60S ribosomal subunit assembly or modification; contains multiple WD repeats; interacts with Qsr1p in a two-hybrid assay
Synonyms YIR012W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0296 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Angio-associated migratory cell protein (contains WD40 repeats)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g71840 GI:15217587
Caenorhabditis elegans (Cel) CE26629
(WBGene00013735)		 GI:17556687 Q9NEX3
Drosophila melanogaster (Dme) 7294340 GI:7294340
Homo sapiens (Hsa) Hs4557229 GI:4557229
Saccharomyces cerevisiae (Sce) YIR012w
(S000001451)		 GI:6322202 P35184
Schizosaccharomyces pombe (Spo) SPAC25H1.08c GI:19114724 O13982
Arabidopsis thaliana (Ath) At1g71840 GI:15217587
Caenorhabditis elegans (Cel) CE26629
(WBGene00013735)		 GI:17556687 Q9NEX3
Drosophila melanogaster (Dme) 7294340 GI:7294340
Homo sapiens (Hsa) Hs4557229 GI:4557229
Saccharomyces cerevisiae (Sce) YIR012w
(S000001451)		 GI:6322202 P35184
Schizosaccharomyces pombe (Spo) SPAC25H1.08c GI:19114724 O13982
Arabidopsis thaliana (Ath) At1g71840 GI:15217587
Caenorhabditis elegans (Cel) CE26629
(WBGene00013735)		 GI:17556687 Q9NEX3
Drosophila melanogaster (Dme) 7294340 GI:7294340
Homo sapiens (Hsa) Hs4557229 GI:4557229
Saccharomyces cerevisiae (Sce) YIR012w
(S000001451)		 GI:6322202 P35184
Schizosaccharomyces pombe (Spo) SPAC25H1.08c GI:19114724 O13982


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC25H1.08c
GO:0005737 cytoplasm C
IDA
SceS000001451
ISS
SpoSPAC25H1.08c
GO:0005829 cytosol C
IDA
SceS000001451
SpoSPAC25H1.08c
GO:0005834 heterotrimeric G-protein complex C
ISS
AthAt1g71840
GO:0022626 cytosolic ribosome C
IDA
SceS000001451
GO:0043234 protein complex C
NAS
SpoSPAC25H1.08c
GO:0000166 nucleotide binding F
ISS
AthAt1g71840
GO:0003674 molecular_function F
ND
SceS000001451
SpoSPAC25H1.08c
GO:0000003 reproduction P
IMP
CelWBGene00013735
GO:0000027 ribosomal large subunit assembly P
IGI
SceS000001451
IMP
SceS000001451
ISS
SpoSPAC25H1.08c
GO:0002119 nematode larval development P
IMP
CelWBGene00013735
GO:0006415 translational termination P
RCA
SceS000001451
GO:0008150 biological_process P
ND
AthAt1g71840
GO:0009451 RNA modification P
RCA
SceS000001451
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00013735
GO:0040007 growth P
IMP
CelWBGene00013735
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00013735
GO:0043094 cellular metabolic compound salvage P
RCA
SceS000001451

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39353

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) SQT1
(S000001451)		 GI:6322202 P35184
Kluyveromyces lactis (Kla) KLLA0D15873g GI:50307559
Eremothecium gossypii (Ego) AGOS_AGR242C GI:45201338
Magnaporthe grisea (Mgr) MGG_03080 GI:39971227
Neurospora crassa (Ncr) NCU02477.1 GI:32422465


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000001451
GO:0005829 cytosol C
IDA
SceS000001451
GO:0022626 cytosolic ribosome C
IDA
SceS000001451
GO:0003674 molecular_function F
ND
SceS000001451
GO:0000027 ribosomal large subunit assembly P
IGI
SceS000001451
IMP
SceS000001451
GO:0006415 translational termination P
RCA
SceS000001451
GO:0009451 RNA modification P
RCA
SceS000001451
GO:0043094 cellular metabolic compound salvage P
RCA
SceS000001451

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2298

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga8454 ENSANGP00000011371
Anopheles gambiae (Aga) aga13198 ENSANGP00000013761
Ashbya gossypii (Ago) ago4553 AGR242C
Arabidopsis thaliana (Ath) ath6465 At1g71840.1
Caenorhabditis elegans (Cel) cel17643 Y111B2A.12
(CE26629;
WBGene00013735)
Caenorhabditis elegans (Cel) cel17658 Y111B2A.28
(CE25201;
WBGene00013745)
Candida glabrata (Cgl) cgl4495 CAGL0L09647g
Cryptococcus neoformans (Cne) cne2499 181.m08542
Cryptococcus neoformans (Cne) cne2611 181.m08829
Dictyostelium discoideum (Ddi) ddi975 DDB0190190
Debaryomyces hansenii (Dha) dha2975 DEHA0D15092g
Drosophila melanogaster (Dme) dme9537 CG5114-PA
(FBgn0036460)
Danio rerio (Dre) dre4041 ENSDARP00000039932
Gallus gallus (Gga) gga21764 ENSGALP00000018640
(AAMP)		 Q5ZLQ3
Gallus gallus (Gga) gga21765 ENSGALP00000018641
Homo sapiens (Hsa) hsa19270 ENSP00000248450
(AAMP)		 Q13685
Kluyveromyces lactis (Kla) kla2758 KLLA0D15873g
Mus musculus (Mmu) mmu539 ENSMUSP00000006462
(MGI:107809)		 Q3TJ22
Neurospora crassa (Ncr) ncr2401 NCU02477.2
Oryza sativa (Osa) osa19000 3310.m00083
Oryza sativa (Osa) osa17963 3325.m00092
Oryza sativa (Osa) osa20525 3558.m00102
Oryza sativa (Osa) osa381 753.m00043
Oryza sativa (Osa) osa86493 9203.m00093
Rattus norvegicus (Rno) rno30232 ENSRNOP00000019497
(RGD:1306281)		 B0K024
Saccharomyces cerevisiae (Sce) sce3217 YIR012W
(S000001451)
Schizosaccharomyces pombe (Spo) spo19 SPAC25H1.08c O13982
Yarrowia lipolytica (Yli) yli1797 YALI0C01738g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:107809
GO:0005634 nucleus C
IDA
SpoSPAC25H1.08c
GO:0005737 cytoplasm C
IDA
SceS000001451
ISS
SpoSPAC25H1.08c
GO:0005829 cytosol C
IDA
SceS000001451
SpoSPAC25H1.08c
GO:0005834 heterotrimeric G-protein complex C
ISS
AthAt1g71840
GO:0022626 cytosolic ribosome C
IDA
SceS000001451
GO:0043234 protein complex C
NAS
SpoSPAC25H1.08c
GO:0000166 nucleotide binding F
ISS
AthAt1g71840
GO:0003674 molecular_function F
ND
MmuMGI:107809
SceS000001451
SpoSPAC25H1.08c
GO:0000003 reproduction P
IMP
CelWBGene00013735
GO:0000027 ribosomal large subunit assembly P
IGI
SceS000001451
IMP
SceS000001451
ISS
SpoSPAC25H1.08c
GO:0002119 nematode larval development P
IMP
CelWBGene00013735
GO:0006415 translational termination P
RCA
SceS000001451
GO:0008150 biological_process P
ND
AthAt1g71840
MmuMGI:107809
GO:0009451 RNA modification P
RCA
SceS000001451
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00013735
GO:0040007 growth P
IMP
CelWBGene00013735
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00013735
GO:0043094 cellular metabolic compound salvage P
RCA
SceS000001451

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC25H1.08c
(O13982)		 YIR012W
(S000001451)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC25H1.08c
GO:0005737 cytoplasm C
IDA
SceS000001451
ISS
SpoSPAC25H1.08c
GO:0005829 cytosol C
IDA
SceS000001451
SpoSPAC25H1.08c
GO:0022626 cytosolic ribosome C
IDA
SceS000001451
GO:0043234 protein complex C
NAS
SpoSPAC25H1.08c
GO:0003674 molecular_function F
ND
SceS000001451
SpoSPAC25H1.08c
GO:0000027 ribosomal large subunit assembly P
IGI
SceS000001451
IMP
SceS000001451
ISS
SpoSPAC25H1.08c
GO:0006415 translational termination P
RCA
SceS000001451
GO:0009451 RNA modification P
RCA
SceS000001451
GO:0043094 cellular metabolic compound salvage P
RCA
SceS000001451

Back to the top
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GO info in one table:

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