YOGY Home YOGY Help

Search term: YJL006C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CTK2
SGD link S000003543
Alternative ID YJL006C
Description Beta subunit of C-terminal domain kinase I (CTDK-I), which phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity
Synonyms YJL006C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0834 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING CDK9 kinase-activating protein cyclin T

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g27630 GI:15217663
Arabidopsis thaliana (Ath) At1g35440 GI:15219592
Arabidopsis thaliana (Ath) At4g19560 GI:15235087
Arabidopsis thaliana (Ath) At4g19600 GI:15235100
Arabidopsis thaliana (Ath) At5g45190 GI:15242333
Caenorhabditis elegans (Cel) CE00173
(WBGene00000507)
GI:17552748 P34425
Caenorhabditis elegans (Cel) CE10334 GI:17560904
Caenorhabditis elegans (Cel) CE29042
(WBGene00000508)
GI:17552750 P34424
Drosophila melanogaster (Dme) 7293966 GI:7293966 O96433
Drosophila melanogaster (Dme) 7300398 GI:7300398 B7Z0M0
Drosophila melanogaster (Dme) 7302150 GI:17864646
Homo sapiens (Hsa) Hs15314109 GI:15314109
Homo sapiens (Hsa) Hs17435501 GI:17435501
Homo sapiens (Hsa) Hs17978466
(CCNT1)
GI:17978466 O60563
Homo sapiens (Hsa) Hs17978469
(CCNT2)
GI:17978469 O60583
Homo sapiens (Hsa) Hs18583591 GI:18583591
Homo sapiens (Hsa) Hs20537725 GI:20537725
Homo sapiens (Hsa) Hs22053652 GI:22053652
Homo sapiens (Hsa) Hs4502629 GI:4502629 O60583
Saccharomyces cerevisiae (Sce) YJL006c
(S000003543)
GI:6322454 P46962
Schizosaccharomyces pombe (Spo) SPBC32F12.06 GI:19112941 O74627
Schizosaccharomyces pombe (Spo) SPBC530.13 GI:19112118 O59748
Encephalitozoon cuniculi (Ecu) ECU01g1150 GI:19075128
Encephalitozoon cuniculi (Ecu) ECU09g0840 GI:19173206
Arabidopsis thaliana (Ath) At1g27630 GI:15217663
Arabidopsis thaliana (Ath) At1g35440 GI:15219592
Arabidopsis thaliana (Ath) At4g19560 GI:15235087
Arabidopsis thaliana (Ath) At4g19600 GI:15235100
Arabidopsis thaliana (Ath) At5g45190 GI:15242333
Caenorhabditis elegans (Cel) CE00173
(WBGene00000507)
GI:17552748 P34425
Caenorhabditis elegans (Cel) CE10334 GI:17560904
Caenorhabditis elegans (Cel) CE29042
(WBGene00000508)
GI:17552750 P34424
Drosophila melanogaster (Dme) 7293966 GI:7293966 O96433
Drosophila melanogaster (Dme) 7300398 GI:7300398 B7Z0M0
Drosophila melanogaster (Dme) 7302150 GI:17864646
Homo sapiens (Hsa) Hs15314109 GI:15314109
Homo sapiens (Hsa) Hs17435501 GI:17435501
Homo sapiens (Hsa) Hs17978466
(CCNT1)
GI:17978466 O60563
Homo sapiens (Hsa) Hs17978469
(CCNT2)
GI:17978469 O60583
Homo sapiens (Hsa) Hs18583591 GI:18583591
Homo sapiens (Hsa) Hs20537725 GI:20537725
Homo sapiens (Hsa) Hs22053652 GI:22053652
Homo sapiens (Hsa) Hs4502629 GI:4502629 O60583
Saccharomyces cerevisiae (Sce) YJL006c
(S000003543)
GI:6322454 P46962
Schizosaccharomyces pombe (Spo) SPBC32F12.06 GI:19112941 O74627
Schizosaccharomyces pombe (Spo) SPBC530.13 GI:19112118 O59748
Encephalitozoon cuniculi (Ecu) ECU01g1150 GI:19075128
Encephalitozoon cuniculi (Ecu) ECU09g0840 GI:19173206


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt4g19560
At1g35440
GO:0005634 nucleus C
IDA
AthAt1g27630
HsaCCNT1
CCNT2
SpoSPBC530.13
SPBC32F12.06
GO:0005654 nucleoplasm C
EXP
HsaCCNT2
CCNT1
IDA
SceS000003543
GO:0005730 nucleolus C
IDA
SceS000003543
GO:0005737 cytoplasm C
IDA
SpoSPBC530.13
GO:0005829 cytosol C
IDA
SpoSPBC32F12.06
SPBC530.13
GO:0008024 positive transcription elongation factor complex
b
C
TAS
SpoSPBC32F12.06
GO:0032806 carboxy-terminal domain protein kinase
complex
C
IPI
SceS000003543
SpoSPBC530.13
ISS
SpoSPBC530.13
GO:0003677 DNA binding F
IDA
HsaCCNT1
GO:0004693 cyclin-dependent protein kinase
activity
F
IPI
SceS000003543
ISS
AthAt4g19560
At4g19600
At1g35440
At1g27630
At5g45190
GO:0005515 protein binding F
IPI
HsaCCNT1
SpoSPBC32F12.06
SPBC530.13
GO:0016538 cyclin-dependent protein kinase regulator
activity
F
ISS
SpoSPBC530.13
NAS
SpoSPBC32F12.06
RCA
SceS000003543
GO:0019207 kinase regulator activity F
RCA
SceS000003543
GO:0019887 protein kinase regulator activity F
RCA
SceS000003543
GO:0030234 enzyme regulator activity F
RCA
SceS000003543
GO:0000079 regulation of cyclin-dependent protein kinase
activity
P
NAS
SpoSPBC32F12.06
SPBC530.13
TAS
HsaCCNT1
CCNT2
GO:0006366 transcription from RNA polymerase II
promoter
P
TAS
HsaCCNT1
CCNT2
GO:0006370 mRNA capping P
TAS
SpoSPBC32F12.06
GO:0006468 protein amino acid phosphorylation P
IPI
HsaCCNT1
SceS000003543
ISS
SpoSPBC530.13
NAS
SpoSPBC32F12.06
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00000508
GO:0009615 response to virus P
IEP
AthAt4g19600
At5g45190
GO:0009908 flower development P
IMP
AthAt5g45190
GO:0010090 trichome morphogenesis P
IMP
AthAt5g45190
At4g19600
GO:0010551 regulation of gene-specific transcription from RNA
polymerase II promoter
P
NAS
SpoSPBC32F12.06
GO:0031031 positive regulation of septation initiation
signaling
P
IMP
SpoSPBC530.13
GO:0031124 mRNA 3'-end processing P
IC
SceS000003543
ISS
SpoSPBC530.13
GO:0031565 cytokinesis checkpoint P
IMP
SpoSPBC530.13
GO:0032786 positive regulation of RNA elongation P
IDA
SceS000003543
GO:0034243 regulation of RNA elongation from RNA polymerase
II promoter
P
NAS
SpoSPBC32F12.06
GO:0045903 positive regulation of translational
fidelity
P
IPI
SceS000003543
ISS
SpoSPBC530.13
GO:0045943 positive regulation of transcription from RNA
polymerase I promoter
P
IMP
SceS000003543
GO:0048366 leaf development P
IGI
AthAt4g19600
At5g45190
GO:0050792 regulation of viral reproduction P
IMP
AthAt5g45190
GO:0051726 regulation of cell cycle P
ISS
AthAt1g27630
At4g19600
At4g19560
At5g45190
At1g35440
GO:0070816 phosphorylation of RNA polymerase II C-terminal
domain
P
IDA
SpoSPBC32F12.06
IMP
SpoSPBC530.13

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39439

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) CTK2
(S000003543)
GI:6322454 P46962
Kluyveromyces lactis (Kla) KLLA0D09482g GI:50307013
Eremothecium gossypii (Ego) AGOS_ACR041W GI:45185728


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005654 nucleoplasm C
IDA
SceS000003543
GO:0005730 nucleolus C
IDA
SceS000003543
GO:0032806 carboxy-terminal domain protein kinase
complex
C
IPI
SceS000003543
GO:0004693 cyclin-dependent protein kinase
activity
F
IPI
SceS000003543
GO:0016538 cyclin-dependent protein kinase regulator
activity
F
RCA
SceS000003543
GO:0019207 kinase regulator activity F
RCA
SceS000003543
GO:0019887 protein kinase regulator activity F
RCA
SceS000003543
GO:0030234 enzyme regulator activity F
RCA
SceS000003543
GO:0006468 protein amino acid phosphorylation P
IPI
SceS000003543
GO:0031124 mRNA 3'-end processing P
IC
SceS000003543
GO:0032786 positive regulation of RNA elongation P
IDA
SceS000003543
GO:0045903 positive regulation of translational
fidelity
P
IPI
SceS000003543
GO:0045943 positive regulation of transcription from RNA
polymerase I promoter
P
IMP
SceS000003543

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_11680

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago1089 ACR041W
Candida glabrata (Cgl) cgl791 CAGL0D02992g
Cryptococcus neoformans (Cne) cne5774 179.m00648
Debaryomyces hansenii (Dha) dha3100 DEHA0D17831g
Kluyveromyces lactis (Kla) kla2483 KLLA0D09482g
Neurospora crassa (Ncr) ncr4364 NCU04495.2
Oryza sativa (Osa) osa7319 2514.m00113
Saccharomyces cerevisiae (Sce) sce3263 YJL006C
(S000003543)
Schizosaccharomyces pombe (Spo) spo2674 SPBC530.13 O59748
Yarrowia lipolytica (Yli) yli4426 YALI0E13640g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC530.13
GO:0005654 nucleoplasm C
IDA
SceS000003543
GO:0005730 nucleolus C
IDA
SceS000003543
GO:0005737 cytoplasm C
IDA
SpoSPBC530.13
GO:0005829 cytosol C
IDA
SpoSPBC530.13
GO:0032806 carboxy-terminal domain protein kinase
complex
C
IPI
SceS000003543
SpoSPBC530.13
ISS
SpoSPBC530.13
GO:0004693 cyclin-dependent protein kinase
activity
F
IPI
SceS000003543
GO:0005515 protein binding F
IPI
SpoSPBC530.13
GO:0016538 cyclin-dependent protein kinase regulator
activity
F
ISS
SpoSPBC530.13
RCA
SceS000003543
GO:0019207 kinase regulator activity F
RCA
SceS000003543
GO:0019887 protein kinase regulator activity F
RCA
SceS000003543
GO:0030234 enzyme regulator activity F
RCA
SceS000003543
GO:0000079 regulation of cyclin-dependent protein kinase
activity
P
NAS
SpoSPBC530.13
GO:0006468 protein amino acid phosphorylation P
IPI
SceS000003543
ISS
SpoSPBC530.13
GO:0031031 positive regulation of septation initiation
signaling
P
IMP
SpoSPBC530.13
GO:0031124 mRNA 3'-end processing P
IC
SceS000003543
ISS
SpoSPBC530.13
GO:0031565 cytokinesis checkpoint P
IMP
SpoSPBC530.13
GO:0032786 positive regulation of RNA elongation P
IDA
SceS000003543
GO:0045903 positive regulation of translational
fidelity
P
IPI
SceS000003543
ISS
SpoSPBC530.13
GO:0045943 positive regulation of transcription from RNA
polymerase I promoter
P
IMP
SceS000003543
GO:0070816 phosphorylation of RNA polymerase II C-terminal
domain
P
IMP
SpoSPBC530.13

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC530.13
(O59748)
YJL006C
(S000003543)