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Search term: YJL024C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name APS3
SGD link S000003561
Alternative ID YJL024C
Description Small subunit of the clathrin-associated adaptor complex AP-3, which is involved in vacuolar protein sorting; related to the sigma subunit of the mammalian clathrin AP-3 complex; suppressor of loss of casein kinase 1 function
Synonyms YJL024C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0936 A-DHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Clathrin adaptor complex, small subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g50860 GI:15230329
Drosophila melanogaster (Dme) 7291698 GI:7291698
Homo sapiens (Hsa) Hs4502861
(AP3S1)		 GI:4502861 Q92572
Homo sapiens (Hsa) Hs5031581
(AP3S2)		 GI:5031581 P59780
Saccharomyces cerevisiae (Sce) YJL024c
(S000003561)		 GI:6322436 P47064
Schizosaccharomyces pombe (Spo) SPAC30D11.05 GI:19114124 Q09905
Arabidopsis thaliana (Ath) At3g50860 GI:15230329
Drosophila melanogaster (Dme) 7291698 GI:7291698
Homo sapiens (Hsa) Hs4502861
(AP3S1)		 GI:4502861 Q92572
Homo sapiens (Hsa) Hs5031581
(AP3S2)		 GI:5031581 P59780
Saccharomyces cerevisiae (Sce) YJL024c
(S000003561)		 GI:6322436 P47064
Schizosaccharomyces pombe (Spo) SPAC30D11.05 GI:19114124 Q09905


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC30D11.05
GO:0005829 cytosol C
IDA
SpoSPAC30D11.05
GO:0030119 AP-type membrane coat adaptor complex C
TAS
HsaAP3S1
GO:0030123 AP-3 adaptor complex C
ISS
SceS000003561
SpoSPAC30D11.05
GO:0030125 clathrin vesicle coat C
ISS
AthAt3g50860
GO:0030133 transport vesicle C
TAS
HsaAP3S1
GO:0003674 molecular_function F
ND
SceS000003561
GO:0005215 transporter activity F
NAS
HsaAP3S1
GO:0006886 intracellular protein transport P
IC
SpoSPAC30D11.05
ISS
AthAt3g50860
GO:0006896 Golgi to vacuole transport P
IMP
SceS000003561
ISS
SpoSPAC30D11.05
GO:0008286 insulin receptor signaling pathway P
TAS
HsaAP3S1
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC30D11.05
TAS
SceS000003561
GO:0045184 establishment of protein localization P
RCA
SceS000003561

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
4254

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) AP3S1 GI:4502861 Q92572
Pan troglodytes (Ptr) AP3S1 GI:114601211
Mus musculus (Mmu) Ap3s1
(MGI:1337062)		 GI:6753078 Q3U8S0
Rattus norvegicus (Rno) Ap3s1 GI:27674131
Gallus gallus (Gga) AP3S1 GI:57528924
Schizosaccharomyces pombe (Spo) aps3
(SPAC30D11.05)		 GI:19114124 Q09905
Saccharomyces cerevisiae (Sce) APS3
(S000003561)		 GI:6322436 P47064
Kluyveromyces lactis (Kla) KLLA0F15268g GI:50311481
Eremothecium gossypii (Ego) AGOS_AAL143W GI:45184681
Magnaporthe grisea (Mgr) MGG_02434 GI:39968683
Neurospora crassa (Ncr) NCU09461.1 GI:32418684


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC30D11.05
GO:0005802 trans-Golgi network C
TAS
MmuMGI:1337062
GO:0005829 cytosol C
IDA
SpoSPAC30D11.05
GO:0030119 AP-type membrane coat adaptor complex C
TAS
HsaAP3S1
GO:0030123 AP-3 adaptor complex C
ISS
SceS000003561
SpoSPAC30D11.05
GO:0030133 transport vesicle C
TAS
HsaAP3S1
GO:0003674 molecular_function F
ND
SceS000003561
GO:0005215 transporter activity F
NAS
HsaAP3S1
GO:0006886 intracellular protein transport P
IC
SpoSPAC30D11.05
TAS
MmuMGI:1337062
GO:0006896 Golgi to vacuole transport P
IMP
SceS000003561
ISS
SpoSPAC30D11.05
GO:0008286 insulin receptor signaling pathway P
TAS
HsaAP3S1
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC30D11.05
TAS
MmuMGI:1337062
SceS000003561
GO:0045184 establishment of protein localization P
RCA
SceS000003561

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2280

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga2917 ENSANGP00000019053
Ashbya gossypii (Ago) ago44 AAL143W
Arabidopsis thaliana (Ath) ath16401 At3g50860.1
Caenorhabditis elegans (Cel) cel19304 Y48G8AL.14
(CE30461;
WBGene00000165)
Candida glabrata (Cgl) cgl808 CAGL0D03388g
Cryptococcus neoformans (Cne) cne1112 180.m02931
Dictyostelium discoideum (Ddi) ddi3186 DDB0217651
Debaryomyces hansenii (Dha) dha6368 DEHA0G14971g
Drosophila melanogaster (Dme) dme6893 CG3029-PA
(FBgn0003008)
Danio rerio (Dre) dre29842 ENSDARP00000003505
Takifugu rubripes (Fru) fru32170 SINFRUP00000127147
Takifugu rubripes (Fru) fru20772 SINFRUP00000153395
Takifugu rubripes (Fru) fru20771 SINFRUP00000153397
Gallus gallus (Gga) gga28179 ENSGALP00000003683
(AP3S1)		 Q5ZJE2
Homo sapiens (Hsa) hsa25608 ENSP00000325369
(AP3S1)		 Q92572
Homo sapiens (Hsa) hsa11170 ENSP00000338777
(AP3S2)		 P59780
Kluyveromyces lactis (Kla) kla4765 KLLA0F15268g
Mus musculus (Mmu) mmu12678 ENSMUSP00000025357
(MGI:1337062)		 Q9DCR2
Mus musculus (Mmu) mmu24233 ENSMUSP00000075082
(MGI:1337060)		 Q8BNE3
Neurospora crassa (Ncr) ncr9213 NCU09461.2
Oryza sativa (Osa) osa8131 2592.m00180
Oryza sativa (Osa) osa33159 4627.m00065
Plasmodium falciparum (Pfa) pfa5266 PFL2425w
Rattus norvegicus (Rno) rno14129 ENSRNOP00000005222
(RGD:1311115)
Saccharomyces cerevisiae (Sce) sce3279 YJL024C
(S000003561)
Schizosaccharomyces pombe (Spo) spo403 SPAC30D11.05 Q09905
Yarrowia lipolytica (Yli) yli5092 YALI0E29733g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC30D11.05
GO:0005802 trans-Golgi network C
TAS
MmuMGI:1337062
MGI:1337060
GO:0005829 cytosol C
IDA
SpoSPAC30D11.05
GO:0008021 synaptic vesicle C
TAS
DmeFBgn0003008
GO:0030123 AP-3 adaptor complex C
ISS
SceS000003561
SpoSPAC30D11.05
GO:0030125 clathrin vesicle coat C
ISS
AthAt3g50860
PfaPFL2425w
GO:0030135 coated vesicle C
TAS
DmeFBgn0003008
GO:0003674 molecular_function F
ND
PfaPFL2425w
SceS000003561
GO:0000003 reproduction P
IMP
CelWBGene00000165
GO:0002119 nematode larval development P
IMP
CelWBGene00000165
GO:0006726 eye pigment biosynthetic process P
TAS
DmeFBgn0003008
GO:0006727 ommochrome biosynthetic process P
IMP
DmeFBgn0003008
GO:0006886 intracellular protein transport P
IC
SpoSPAC30D11.05
ISS
AthAt3g50860
TAS
MmuMGI:1337062
MGI:1337060
GO:0006896 Golgi to vacuole transport P
IMP
SceS000003561
ISS
SpoSPAC30D11.05
GO:0006901 vesicle coating P
TAS
DmeFBgn0003008
GO:0007040 lysosome organization P
ISS
DmeFBgn0003008
GO:0007269 neurotransmitter secretion P
NAS
DmeFBgn0003008
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00000165
GO:0010171 body morphogenesis P
IMP
CelWBGene00000165
GO:0016183 synaptic vesicle coating P
TAS
DmeFBgn0003008
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC30D11.05
TAS
MmuMGI:1337062
MGI:1337060
SceS000003561
GO:0040007 growth P
IMP
CelWBGene00000165
GO:0045184 establishment of protein localization P
RCA
SceS000003561
GO:0046907 intracellular transport P
TAS
DmeFBgn0003008
GO:0048072 compound eye pigmentation P
IMP
DmeFBgn0003008

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC30D11.05
(Q09905)		 YJL024C
(S000003561)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC30D11.05
GO:0005829 cytosol C
IDA
SpoSPAC30D11.05
GO:0030123 AP-3 adaptor complex C
ISS
SceS000003561
SpoSPAC30D11.05
GO:0003674 molecular_function F
ND
SceS000003561
GO:0006886 intracellular protein transport P
IC
SpoSPAC30D11.05
GO:0006896 Golgi to vacuole transport P
IMP
SceS000003561
ISS
SpoSPAC30D11.05
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC30D11.05
TAS
SceS000003561
GO:0045184 establishment of protein localization P
RCA
SceS000003561

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Search for gene by ID or name:

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GO info in one table:

s.khadayate@ucl.ac.uk