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Search term: YJL025W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RRN7
SGD link S000003562
Alternative ID YJL025W
Description Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p
Synonyms YJL025W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39433

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RRN7
(S000003562)
GI:6322435
Kluyveromyces lactis (Kla) KLLA0F15180g GI:50311473
Eremothecium gossypii (Ego) AGOS_AAL140C GI:45184684


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0070860 RNA polymerase I core factor complex C
IDA
SceS000003562
GO:0003701 RNA polymerase I transcription factor
activity
F
IDA
SceS000003562
IMP
SceS000003562
GO:0010843 promoter binding F
NAS
SceS000003562
GO:0006360 transcription from RNA polymerase I
promoter
P
IDA
SceS000003562
IGI
SceS000003562
GO:0006361 transcription initiation from RNA polymerase I
promoter
P
NAS
SceS000003562
GO:0006364 rRNA processing P
RCA
SceS000003562
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000003562

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_17564

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago47 AAL140C
Candida glabrata (Cgl) cgl809 CAGL0D03410g
Debaryomyces hansenii (Dha) dha5890 DEHA0G04367g
Kluyveromyces lactis (Kla) kla4761 KLLA0F15180g
Saccharomyces cerevisiae (Sce) sce3280 YJL025W
(S000003562)
Schizosaccharomyces pombe (Spo) spo3878 SPBC336.09c Q9UST5
Yarrowia lipolytica (Yli) yli1711 YALI0B23210g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000120 RNA polymerase I transcription factor
complex
C
IDA
SpoSPBC336.09c
GO:0005634 nucleus C
IDA
SpoSPBC336.09c
GO:0005829 cytosol C
IDA
SpoSPBC336.09c
GO:0070860 RNA polymerase I core factor complex C
IDA
SceS000003562
GO:0003701 RNA polymerase I transcription factor
activity
F
IDA
SceS000003562
SpoSPBC336.09c
IMP
SceS000003562
GO:0005515 protein binding F
IPI
SpoSPBC336.09c
GO:0010843 promoter binding F
NAS
SceS000003562
GO:0006360 transcription from RNA polymerase I
promoter
P
IDA
SceS000003562
SpoSPBC336.09c
IGI
SceS000003562
GO:0006361 transcription initiation from RNA polymerase I
promoter
P
NAS
SceS000003562
GO:0006364 rRNA processing P
RCA
SceS000003562
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000003562

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC336.09c
(Q9UST5)
YJL025W
(S000003562)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000120 RNA polymerase I transcription factor
complex
C
IDA
SpoSPBC336.09c
GO:0005634 nucleus C
IDA
SpoSPBC336.09c
GO:0005829 cytosol C
IDA
SpoSPBC336.09c
GO:0070860 RNA polymerase I core factor complex C
IDA
SceS000003562
GO:0003701 RNA polymerase I transcription factor
activity
F
IDA
SceS000003562
SpoSPBC336.09c
IMP
SceS000003562
GO:0005515 protein binding F
IPI
SpoSPBC336.09c
GO:0010843 promoter binding F
NAS
SceS000003562
GO:0006360 transcription from RNA polymerase I
promoter
P
IDA
SceS000003562
SpoSPBC336.09c
IGI
SceS000003562
GO:0006361 transcription initiation from RNA polymerase I
promoter
P
NAS
SceS000003562
GO:0006364 rRNA processing P
RCA
SceS000003562
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000003562

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