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Search term: YJL069C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name UTP18
SGD link S000003605
Alternative ID YJL069C
Description Possible U3 snoRNP protein involved in maturation of pre-18S rRNA, based on computational analysis of large-scale protein-protein interaction data
Synonyms YJL069C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

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Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2055 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED WD40 repeat protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g14050 GI:15241293
Caenorhabditis elegans (Cel) CE00816
(WBGene00015104)
GI:17551766 P42000
Drosophila melanogaster (Dme) 7302935
(FBgn0022070)
GI:20130051
Homo sapiens (Hsa) Hs7705765 GI:7705765
Saccharomyces cerevisiae (Sce) YJL069c
(S000003605)
GI:6322392 P40362
Schizosaccharomyces pombe (Spo) SPBC29A3.06 GI:19112626 P78750


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
DmeFBgn0022070
GO:0005730 nucleolus C
IDA
DmeFBgn0022070
SceS000003605
GO:0030532 small nuclear ribonucleoprotein
complex
C
IPI
DmeFBgn0022070
GO:0030686 90S preribosome C
IDA
SceS000003605
GO:0032040 small-subunit processome C
IDA
SceS000003605
GO:0034388 Pwp2p-containing subcomplex of 90S
preribosome
C
IDA
SceS000003605
GO:0042585 germinal vesicle C
IDA
DmeFBgn0022070
GO:0043234 protein complex C
NAS
SpoSPBC29A3.06
GO:0080008 CUL4 RING ubiquitin ligase complex C
ISS
AthAt5g14050
GO:0000166 nucleotide binding F
ISS
AthAt5g14050
GO:0003674 molecular_function F
ND
DmeFBgn0022070
SceS000003605
SpoSPBC29A3.06
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000003605
GO:0000472 endonucleolytic cleavage to generate mature 5'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000003605
GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000003605
GO:0002119 nematode larval development P
IMP
CelWBGene00015104
GO:0006364 rRNA processing P
IMP
DmeFBgn0022070
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00015104
GO:0007405 neuroblast proliferation P
IMP
DmeFBgn0022070
GO:0008150 biological_process P
ND
AthAt5g14050
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00015104
GO:0040007 growth P
IMP
CelWBGene00015104
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00015104
GO:0042254 ribosome biogenesis P
ISS
SpoSPBC29A3.06
GO:0048132 female germ-line stem cell division P
IMP
DmeFBgn0022070

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
101603

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPBC29A3.06 GI:19112626 P78750
Saccharomyces cerevisiae (Sce) UTP18
(S000003605)
GI:6322392 P40362
Kluyveromyces lactis (Kla) KLLA0F02013g GI:50310303
Eremothecium gossypii (Ego) AGOS_AEL153W GI:45190454
Neurospora crassa (Ncr) NCU03018.1 GI:32419523


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SceS000003605
GO:0030686 90S preribosome C
IDA
SceS000003605
GO:0032040 small-subunit processome C
IDA
SceS000003605
GO:0034388 Pwp2p-containing subcomplex of 90S
preribosome
C
IDA
SceS000003605
GO:0043234 protein complex C
NAS
SpoSPBC29A3.06
GO:0003674 molecular_function F
ND
SceS000003605
SpoSPBC29A3.06
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000003605
GO:0000472 endonucleolytic cleavage to generate mature 5'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000003605
GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000003605
GO:0042254 ribosome biogenesis P
ISS
SpoSPBC29A3.06

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2584

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga11155 ENSANGP00000005197
Ashbya gossypii (Ago) ago2353 AEL153W
Arabidopsis thaliana (Ath) ath23606 At5g14050.1
Caenorhabditis elegans (Cel) cel280 B0280.9
(CE00816;
WBGene00015104)
Candida glabrata (Cgl) cgl2188 CAGL0H02937g
Cryptococcus neoformans (Cne) cne4578 186.m03418
Dictyostelium discoideum (Ddi) ddi3510 DDB0202798
Debaryomyces hansenii (Dha) dha5167 DEHA0F17490g
Drosophila melanogaster (Dme) dme5438 CG7989-PA
(FBgn0022070)
Danio rerio (Dre) dre19939 ENSDARP00000005831
Takifugu rubripes (Fru) fru22377 SINFRUP00000140972
Takifugu rubripes (Fru) fru22378 SINFRUP00000140975
Gallus gallus (Gga) gga8473 ENSGALP00000004714
Homo sapiens (Hsa) hsa14019 ENSP00000225298
(UTP18)
Q9Y5J1
Kluyveromyces lactis (Kla) kla4170 KLLA0F02013g
Mus musculus (Mmu) mmu4565 ENSMUSP00000068103
(MGI:1923402)
Q5SSI6
Neurospora crassa (Ncr) ncr2923 NCU03018.2
Oryza sativa (Osa) osa78437 7492.m00129
Rattus norvegicus (Rno) rno5892 ENSRNOP00000003582
(RGD:1309957)
Saccharomyces cerevisiae (Sce) sce3327 YJL069C
(S000003605)
Schizosaccharomyces pombe (Spo) spo1790 SPBC29A3.06 P78750
Yarrowia lipolytica (Yli) yli6639 YALI0F31471g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1923402
GO:0005634 nucleus C
IDA
DmeFBgn0022070
GO:0005730 nucleolus C
IDA
DmeFBgn0022070
SceS000003605
GO:0030532 small nuclear ribonucleoprotein
complex
C
IPI
DmeFBgn0022070
GO:0030686 90S preribosome C
IDA
SceS000003605
GO:0032040 small-subunit processome C
IDA
SceS000003605
GO:0034388 Pwp2p-containing subcomplex of 90S
preribosome
C
IDA
SceS000003605
GO:0042585 germinal vesicle C
IDA
DmeFBgn0022070
GO:0043234 protein complex C
NAS
SpoSPBC29A3.06
GO:0080008 CUL4 RING ubiquitin ligase complex C
ISS
AthAt5g14050
GO:0000166 nucleotide binding F
ISS
AthAt5g14050
GO:0003674 molecular_function F
ND
DmeFBgn0022070
MmuMGI:1923402
SceS000003605
SpoSPBC29A3.06
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000003605
GO:0000472 endonucleolytic cleavage to generate mature 5'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000003605
GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000003605
GO:0002119 nematode larval development P
IMP
CelWBGene00015104
GO:0006364 rRNA processing P
IMP
DmeFBgn0022070
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00015104
GO:0007405 neuroblast proliferation P
IMP
DmeFBgn0022070
GO:0008150 biological_process P
ND
AthAt5g14050
MmuMGI:1923402
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00015104
GO:0040007 growth P
IMP
CelWBGene00015104
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00015104
GO:0042254 ribosome biogenesis P
ISS
SpoSPBC29A3.06
GO:0048132 female germ-line stem cell division P
IMP
DmeFBgn0022070

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC29A3.06
(P78750)
YJL069C
(S000003605)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SceS000003605
GO:0030686 90S preribosome C
IDA
SceS000003605
GO:0032040 small-subunit processome C
IDA
SceS000003605
GO:0034388 Pwp2p-containing subcomplex of 90S
preribosome
C
IDA
SceS000003605
GO:0043234 protein complex C
NAS
SpoSPBC29A3.06
GO:0003674 molecular_function F
ND
SceS000003605
SpoSPBC29A3.06
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000003605
GO:0000472 endonucleolytic cleavage to generate mature 5'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000003605
GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000003605
GO:0042254 ribosome biogenesis P
ISS
SpoSPBC29A3.06

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk