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Search term: YJL088W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ARG3
SGD link S000003624
Alternative ID YJL088W
Description Ornithine carbamoyltransferase (carbamoylphosphate:L-ornithine carbamoyltransferase), catalyzes the sixth step in the biosynthesis of the arginine precursor ornithine
Synonyms YJL088W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1504 A--HYP-

KOGs classification KOGs description
METABOLISM Ornithine carbamoyltransferase OTC/ARG3

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g75330 GI:15222192
Homo sapiens (Hsa) Hs9257234 GI:9257234
Saccharomyces cerevisiae (Sce) YJL088w
(S000003624)		 GI:6322373 P05150
Schizosaccharomyces pombe (Spo) SPAC4G9.10 GI:19114604 P31317


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC4G9.10
GO:0005739 mitochondrion C
IDA
SpoSPAC4G9.10
GO:0005829 cytosol C
IDA
SceS000003624
GO:0009507 chloroplast C
IDA
AthAt1g75330
GO:0009570 chloroplast stroma C
IDA
AthAt1g75330
GO:0004585 ornithine carbamoyltransferase
activity		 F
IDA
SceS000003624
IMP
SpoSPAC4G9.10
GO:0016597 amino acid binding F
ISS
AthAt1g75330
GO:0016743 carboxyl- or carbamoyltransferase
activity		 F
ISS
AthAt1g75330
GO:0006414 translational elongation P
RCA
SceS000003624
GO:0006520 cellular amino acid metabolic process P
ISS
AthAt1g75330
GO:0006526 arginine biosynthetic process P
TAS
SceS000003624
GO:0006591 ornithine metabolic process P
IC
SpoSPAC4G9.10
TAS
SceS000003624
GO:0042450 arginine biosynthetic process via
ornithine		 P
IMP
SpoSPAC4G9.10

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
446

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) OTC GI:38788445
Canis familiaris (Cfa) OTC GI:57111695
Mus musculus (Mmu) Otc
(MGI:97448)		 GI:6679184 P11725
Rattus norvegicus (Rno) Otc
(RGD:3236)		 GI:6981312 44348
Gallus gallus (Gga) OTC GI:46048857
Schizosaccharomyces pombe (Spo) arg3
(SPAC4G9.10)		 GI:19114604 P31317
Saccharomyces cerevisiae (Sce) ARG3
(S000003624)		 GI:6322373 P05150
Kluyveromyces lactis (Kla) KLLA0F14366g GI:50311401
Eremothecium gossypii (Ego) AGOS_AFR098W GI:45198616
Magnaporthe grisea (Mgr) MGG_01102 GI:39973503
Neurospora crassa (Ncr) NCU01667.1 GI:32415253
Arabidopsis thaliana (Ath) OTC GI:15222192
Oryza sativa (Osa) Os02g0704800 GI:115448165


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC4G9.10
ISO
MmuMGI:97448
GO:0005739 mitochondrion C
IDA
HsaOTC
MmuMGI:97448
SpoSPAC4G9.10
ISO
MmuMGI:97448
GO:0005743 mitochondrial inner membrane C
IDA
MmuMGI:97448
ISO
MmuMGI:97448
GO:0005759 mitochondrial matrix C
NAS
HsaOTC
GO:0005829 cytosol C
IDA
SceS000003624
GO:0009348 ornithine carbamoyltransferase
complex		 C
NAS
HsaOTC
GO:0004585 ornithine carbamoyltransferase
activity		 F
IDA
SceS000003624
IMP
SpoSPAC4G9.10
ISO
MmuMGI:97448
NAS
HsaOTC
GO:0005543 phospholipid binding F
ISO
MmuMGI:97448
GO:0016597 amino acid binding F
ISO
MmuMGI:97448
GO:0042301 phosphate binding F
ISO
MmuMGI:97448
GO:0000050 urea cycle P
ISO
MmuMGI:97448
NAS
HsaOTC
GO:0006414 translational elongation P
RCA
SceS000003624
GO:0006526 arginine biosynthetic process P
NAS
HsaOTC
TAS
SceS000003624
GO:0006591 ornithine metabolic process P
IC
SpoSPAC4G9.10
ISO
MmuMGI:97448
TAS
SceS000003624
GO:0042450 arginine biosynthetic process via
ornithine		 P
IMP
SpoSPAC4G9.10
GO:0051259 protein oligomerization P
ISO
MmuMGI:97448
GO:0055081 anion homeostasis P
ISO
MmuMGI:97448

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1979

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago3290 AFR098W
Arabidopsis thaliana (Ath) ath6850 At1g75330.1
Candida glabrata (Cgl) cgl2988 CAGL0I10791g
Cryptococcus neoformans (Cne) cne5517 179.m00370
Debaryomyces hansenii (Dha) dha282 DEHA0A06325g
Debaryomyces hansenii (Dha) dha2486 DEHA0D04235g
Escherichia coli (Eco) eco267 16128258
Escherichia coli (Eco) eco4096 16132076
Takifugu rubripes (Fru) fru6095 SINFRUP00000157175
Takifugu rubripes (Fru) fru6096 SINFRUP00000176157
Gallus gallus (Gga) gga2280 ENSGALP00000026160
(OTC)		 Q9YHY9
Homo sapiens (Hsa) hsa32633 ENSP00000039007
(OTC)		 P00480
Kluyveromyces lactis (Kla) kla4725 KLLA0F14366g
Mus musculus (Mmu) mmu28689 ENSMUSP00000056152
(MGI:97448)		 P11725
Neurospora crassa (Ncr) ncr1621 NCU01667.2
Oryza sativa (Osa) osa63374 6621.m00157
Rattus norvegicus (Rno) rno30880 ENSRNOP00000004686
(RGD:3236)		 P00481
Rattus norvegicus (Rno) rno30879 ENSRNOP00000043225
Saccharomyces cerevisiae (Sce) sce3348 YJL088W
(S000003624)
Schizosaccharomyces pombe (Spo) spo3435 SPAC4G9.10 P31317
Yarrowia lipolytica (Yli) yli3322 YALI0D14894g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC4G9.10
ISO
MmuMGI:97448
GO:0005739 mitochondrion C
IDA
MmuMGI:97448
SpoSPAC4G9.10
ISO
MmuMGI:97448
GO:0005743 mitochondrial inner membrane C
IDA
MmuMGI:97448
ISO
MmuMGI:97448
GO:0005829 cytosol C
IDA
SceS000003624
GO:0009507 chloroplast C
IDA
AthAt1g75330
GO:0009570 chloroplast stroma C
IDA
AthAt1g75330
GO:0004585 ornithine carbamoyltransferase
activity		 F
IDA
SceS000003624
IMP
SpoSPAC4G9.10
ISO
MmuMGI:97448
GO:0005543 phospholipid binding F
ISO
MmuMGI:97448
GO:0016597 amino acid binding F
ISO
MmuMGI:97448
ISS
AthAt1g75330
GO:0016743 carboxyl- or carbamoyltransferase
activity		 F
ISS
AthAt1g75330
GO:0042301 phosphate binding F
ISO
MmuMGI:97448
GO:0000050 urea cycle P
ISO
MmuMGI:97448
GO:0006414 translational elongation P
RCA
SceS000003624
GO:0006520 cellular amino acid metabolic process P
ISS
AthAt1g75330
GO:0006526 arginine biosynthetic process P
TAS
SceS000003624
GO:0006591 ornithine metabolic process P
IC
SpoSPAC4G9.10
ISO
MmuMGI:97448
TAS
SceS000003624
GO:0042450 arginine biosynthetic process via
ornithine		 P
IMP
SpoSPAC4G9.10
GO:0051259 protein oligomerization P
ISO
MmuMGI:97448
GO:0055081 anion homeostasis P
ISO
MmuMGI:97448

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC4G9.10
(P31317)		 YJL088W
(S000003624)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC4G9.10
GO:0005739 mitochondrion C
IDA
SpoSPAC4G9.10
GO:0005829 cytosol C
IDA
SceS000003624
GO:0004585 ornithine carbamoyltransferase
activity		 F
IDA
SceS000003624
IMP
SpoSPAC4G9.10
GO:0006414 translational elongation P
RCA
SceS000003624
GO:0006526 arginine biosynthetic process P
TAS
SceS000003624
GO:0006591 ornithine metabolic process P
IC
SpoSPAC4G9.10
TAS
SceS000003624
GO:0042450 arginine biosynthetic process via
ornithine		 P
IMP
SpoSPAC4G9.10

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GO info in one table:

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