YOGY Home YOGY Help

Search term: YJL104W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PAM16
SGD link S000003640
Alternative ID YJL104W
Description Constituent of the import motor (PAM complex) component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); forms a 1:1 subcomplex with Pam18p and inhibits its cochaperone activity; contains a J-like domain
Synonyms YJL104W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3442 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g59280 GI:11357639
Arabidopsis thaliana (Ath) At5g61880 GI:15240378
Caenorhabditis elegans (Cel) CE16051
(WBGene00009734)		 GI:17553472 O62250
Drosophila melanogaster (Dme) 7290834 GI:7290834
Drosophila melanogaster (Dme) 7300085 GI:7300085
Homo sapiens (Hsa) Hs20806101 GI:20806101
Saccharomyces cerevisiae (Sce) YJL104w
(S000003640)		 GI:6322357 P42949
Schizosaccharomyces pombe (Spo) SPBC713.10 GI:19112141 Q9C1W5


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0001405 presequence translocase-associated import
motor		 C
IDA
SceS000003640
ISS
SpoSPBC713.10
GO:0005739 mitochondrion C
IDA
SceS000003640
SpoSPBC713.10
GO:0005744 mitochondrial inner membrane presequence
translocase complex		 C
IDA
SceS000003640
GO:0005759 mitochondrial matrix C
ISS
SpoSPBC713.10
GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane
transporter activity		 F
ISS
SpoSPBC713.10
GO:0019904 protein domain specific binding F
IDA
SceS000003640
GO:0000003 reproduction P
IMP
CelWBGene00009734
GO:0002119 nematode larval development P
IMP
CelWBGene00009734
GO:0008150 biological_process P
ND
AthAt5g61880
At3g59280
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00009734
GO:0030150 protein import into mitochondrial
matrix		 P
IMP
SceS000003640
IPI
SceS000003640
ISS
SpoSPBC713.10
GO:0040007 growth P
IMP
CelWBGene00009734
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00009734

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39403

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) PAM16
(S000003640)		 GI:6322357 P42949
Kluyveromyces lactis (Kla) KLLA0F13860g GI:50311359
Eremothecium gossypii (Ego) AGOS_AFR078W GI:45198596
Magnaporthe grisea (Mgr) MGG_00406 GI:145611406
Neurospora crassa (Ncr) NCU05515.1 GI:32409779


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0001405 presequence translocase-associated import
motor		 C
IDA
SceS000003640
GO:0005739 mitochondrion C
IDA
SceS000003640
GO:0005744 mitochondrial inner membrane presequence
translocase complex		 C
IDA
SceS000003640
GO:0019904 protein domain specific binding F
IDA
SceS000003640
GO:0030150 protein import into mitochondrial
matrix		 P
IMP
SceS000003640
IPI
SceS000003640

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3974

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga5133 ENSANGP00000018753
Ashbya gossypii (Ago) ago3270 AFR078W
Arabidopsis thaliana (Ath) ath17341 At3g59280.1
Caenorhabditis elegans (Cel) cel9279 F45G2.8
(CE16051;
WBGene00009734)
Candida glabrata (Cgl) cgl1817 CAGL0G04521g
Dictyostelium discoideum (Ddi) ddi6063 DDB0205258
Debaryomyces hansenii (Dha) dha740 DEHA0B01364g
Drosophila melanogaster (Dme) dme16878 CG1409-PA
(FBgn0029964)
Drosophila melanogaster (Dme) dme12843 CG5268-PA
(FBgn0038387)
Takifugu rubripes (Fru) fru18206 SINFRUP00000168765
Gallus gallus (Gga) gga6823 ENSGALP00000012616
(MAGMAS)
Homo sapiens (Hsa) hsa11594 ENSP00000315693
(Magmas)		 Q9Y3D7
Kluyveromyces lactis (Kla) kla4704 KLLA0F13860g
Mus musculus (Mmu) mmu9822 ENSMUSP00000014445
(MGI:1913699)		 Q9CQV1
Mus musculus (Mmu) mmu2092 ENSMUSP00000062209
(MGI:1913699)		 Q9CQV1
Neurospora crassa (Ncr) ncr5357 NCU05515.2
Oryza sativa (Osa) osa414 39.m00071
Rattus norvegicus (Rno) rno4479 ENSRNOP00000006314
(RGD:1598163)
Saccharomyces cerevisiae (Sce) sce3364 YJL104W
(S000003640)
Schizosaccharomyces pombe (Spo) spo703 SPBC713.10 Q9C1W5
Yarrowia lipolytica (Yli) yli5465 YALI0F03047g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0001405 presequence translocase-associated import
motor		 C
IDA
SceS000003640
ISS
SpoSPBC713.10
GO:0005575 cellular_component C
ND
DmeFBgn0038387
GO:0005737 cytoplasm C
IDA
MmuMGI:1913699
GO:0005739 mitochondrion C
IDA
MmuMGI:1913699
SceS000003640
SpoSPBC713.10
GO:0005743 mitochondrial inner membrane C
IDA
MmuMGI:1913699
GO:0005744 mitochondrial inner membrane presequence
translocase complex		 C
IDA
SceS000003640
GO:0005759 mitochondrial matrix C
ISS
SpoSPBC713.10
GO:0003674 molecular_function F
ND
DmeFBgn0038387
MmuMGI:1913699
GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane
transporter activity		 F
ISS
SpoSPBC713.10
GO:0019904 protein domain specific binding F
IDA
SceS000003640
GO:0000003 reproduction P
IMP
CelWBGene00009734
GO:0001700 embryonic development via the syncytial
blastoderm		 P
IMP
DmeFBgn0038387
GO:0002119 nematode larval development P
IMP
CelWBGene00009734
GO:0002168 instar larval development P
IMP
DmeFBgn0038387
GO:0008150 biological_process P
ND
AthAt3g59280
MmuMGI:1913699
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00009734
GO:0030150 protein import into mitochondrial
matrix		 P
IMP
SceS000003640
IPI
SceS000003640
ISS
SpoSPBC713.10
GO:0040007 growth P
IMP
CelWBGene00009734
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00009734

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC713.10
(Q9C1W5)		 YJL104W
(S000003640)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0001405 presequence translocase-associated import
motor		 C
IDA
SceS000003640
ISS
SpoSPBC713.10
GO:0005739 mitochondrion C
IDA
SceS000003640
SpoSPBC713.10
GO:0005744 mitochondrial inner membrane presequence
translocase complex		 C
IDA
SceS000003640
GO:0005759 mitochondrial matrix C
ISS
SpoSPBC713.10
GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane
transporter activity		 F
ISS
SpoSPBC713.10
GO:0019904 protein domain specific binding F
IDA
SceS000003640
GO:0030150 protein import into mitochondrial
matrix		 P
IMP
SceS000003640
IPI
SceS000003640
ISS
SpoSPBC713.10

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk