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Search term: YJL121C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPE1
SGD link S000003657
Alternative ID YJL121C
Description D-ribulose-5-phosphate 3-epimerase, catalyzes a reaction in the non-oxidative part of the pentose-phosphate pathway; mutants are sensitive to oxidative stress
Synonyms YJL121C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3111 ACDHYPE

KOGs classification KOGs description
METABOLISM D-ribulose-5-phosphate 3-epimerase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g63290 GI:15221735
Arabidopsis thaliana (Ath) At3g01850 GI:6091725
Arabidopsis thaliana (Ath) At5g61410 GI:15240250
Caenorhabditis elegans (Cel) CE27934
(WBGene00017272)		 GI:17552948 Q95ZW2
Drosophila melanogaster (Dme) 7304193_2 GI:20129759
Homo sapiens (Hsa) Hs14727532 GI:14727532
Homo sapiens (Hsa) Hs14746517 GI:14746517
Homo sapiens (Hsa) Hs20476519 GI:20476519
Saccharomyces cerevisiae (Sce) YJL121c
(S000003657)		 GI:6322341 P46969
Schizosaccharomyces pombe (Spo) SPAC31G5.05c GI:19114917 O14105
Encephalitozoon cuniculi (Ecu) ECU06g1040 GI:19074354 Q8SRP6


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC31G5.05c
GO:0005829 cytosol C
IDA
SpoSPAC31G5.05c
ISS
SpoSPAC31G5.05c
TAS
SceS000003657
GO:0005886 plasma membrane C
IDA
AthAt1g63290
GO:0009507 chloroplast C
IDA
AthAt5g61410
GO:0009570 chloroplast stroma C
IDA
AthAt5g61410
GO:0009579 thylakoid C
IDA
AthAt5g61410
GO:0009941 chloroplast envelope C
IDA
AthAt5g61410
GO:0010319 stromule C
IDA
AthAt5g61410
GO:0048046 apoplast C
IDA
AthAt5g61410
GO:0004750 ribulose-phosphate 3-epimerase
activity		 F
IDA
SceS000003657
IMP
SceS000003657
ISS
AthAt5g61410
At3g01850
At1g63290
SceS000003657
SpoSPAC31G5.05c
GO:0005975 carbohydrate metabolic process P
ISS
AthAt1g63290
At5g61410
At3g01850
GO:0006098 pentose-phosphate shunt P
IMP
SceS000003657
GO:0009052 pentose-phosphate shunt, non-oxidative
branch		 P
ISS
SpoSPAC31G5.05c
GO:0009409 response to cold P
IEP
AthAt5g61410
GO:0009624 response to nematode P
IMP
AthAt5g61410
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt5g61410
GO:0043094 cellular metabolic compound salvage P
RCA
SceS000003657

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
12005

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPE GI:40385883
Pan troglodytes (Ptr) RPE GI:55615453
Canis familiaris (Cfa) RPE GI:74005315
Mus musculus (Mmu) Rpe
(MGI:1913896)		 GI:27532955 Q3UDM8
Rattus norvegicus (Rno) Rpe GI:76559938
Gallus gallus (Gga) RPE GI:118093257
Drosophila melanogaster (Dme) CG30499
(FBgn0050499)		 GI:24586301
Anopheles gambiae (Aga) AgaP_AGAP005080 GI:118784828
Caenorhabditis elegans (Cel) F08F8.7
(CE27934;
WBGene00017272)		 GI:17552948 Q95ZW2
Schizosaccharomyces pombe (Spo) SPAC31G5.05c GI:19114917 O14105
Saccharomyces cerevisiae (Sce) RPE1
(S000003657)		 GI:6322341 P46969
Kluyveromyces lactis (Kla) KLLA0E15136g GI:50309245
Eremothecium gossypii (Ego) AGOS_AFL208C GI:45198313
Magnaporthe grisea (Mgr) MGG_00534 GI:39974639
Neurospora crassa (Ncr) NCU00519.1 GI:32408435
Arabidopsis thaliana (Ath) AT3G01850 GI:18395962
Arabidopsis thaliana (Ath) AT1G63290 GI:15221735
Oryza sativa (Osa) Os09g0505700 GI:115480021
Plasmodium falciparum (Pfa) PFL0960w GI:124805999


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
PfaPFL0960w
GO:0005625 soluble fraction C
ISO
MmuMGI:1913896
GO:0005634 nucleus C
IDA
SpoSPAC31G5.05c
GO:0005792 microsome C
ISO
MmuMGI:1913896
GO:0005829 cytosol C
IDA
SpoSPAC31G5.05c
ISS
SpoSPAC31G5.05c
TAS
SceS000003657
GO:0005886 plasma membrane C
IDA
AthAt1g63290
GO:0004750 ribulose-phosphate 3-epimerase
activity		 F
IDA
SceS000003657
IMP
SceS000003657
ISO
MmuMGI:1913896
ISS
AthAt3g01850
At1g63290
SceS000003657
SpoSPAC31G5.05c
GO:0005515 protein binding F
IPI
HsaRPE
GO:0005529 sugar binding F
ISO
MmuMGI:1913896
GO:0048029 monosaccharide binding F
ISO
MmuMGI:1913896
GO:0005975 carbohydrate metabolic process P
ISS
AthAt1g63290
At3g01850
GO:0006098 pentose-phosphate shunt P
IMP
SceS000003657
ISO
MmuMGI:1913896
GO:0009052 pentose-phosphate shunt, non-oxidative
branch		 P
ISO
MmuMGI:1913896
ISS
PfaPFL0960w
SpoSPAC31G5.05c
GO:0043094 cellular metabolic compound salvage P
RCA
SceS000003657

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_651

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga460 ENSANGP00000010041
Ashbya gossypii (Ago) ago2987 AFL208C
Arabidopsis thaliana (Ath) ath5531 At1g63290.1
Arabidopsis thaliana (Ath) ath12187 At3g01850.1
Arabidopsis thaliana (Ath) ath12188 At3g01850.2
Arabidopsis thaliana (Ath) ath28234 At5g61410.1
Arabidopsis thaliana (Ath) ath28235 At5g61410.2
Caenorhabditis elegans (Cel) cel5690 F08F8.7
(CE27934;
WBGene00017272)
Candida glabrata (Cgl) cgl4317 CAGL0L05478g
Cryptococcus neoformans (Cne) cne2373 181.m08408
Dictyostelium discoideum (Ddi) ddi12357 DDB0231226
Debaryomyces hansenii (Dha) dha5043 DEHA0F14773g
Drosophila melanogaster (Dme) dme3682 CG30499-PA
(FBgn0050499)
Danio rerio (Dre) dre23476 ENSDARP00000023863
(rpe)		 Q6PBW9
Escherichia coli (Eco) eco3267 16131264
Encephalitozoon cuniculi (Ecu) ecu1581 19074354
Takifugu rubripes (Fru) fru31394 SINFRUP00000137316
Homo sapiens (Hsa) hsa19215 ENSP00000346501
(RPE)		 Q96AT9-2
Homo sapiens (Hsa) hsa19216 ENSP00000351556
Homo sapiens (Hsa) hsa19214 ENSP00000352401
(RPE)		 Q96AT9-1
Kluyveromyces lactis (Kla) kla3628 KLLA0E15136g
Mus musculus (Mmu) mmu486 ENSMUSP00000027157
(MGI:1913896)		 Q8VEE0
Neurospora crassa (Ncr) ncr505 NCU00519.2
Oryza sativa (Osa) osa20971 3575.m00195
Plasmodium falciparum (Pfa) pfa4975 PFL0960w
Rattus norvegicus (Rno) rno30182 ENSRNOP00000017197
(RGD:1564890)		 Q3MIF0
Saccharomyces cerevisiae (Sce) sce3381 YJL121C
(S000003657)
Schizosaccharomyces pombe (Spo) spo2248 SPAC31G5.05c O14105
Yarrowia lipolytica (Yli) yli2211 YALI0C11880g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
PfaPFL0960w
GO:0005625 soluble fraction C
ISO
MmuMGI:1913896
GO:0005634 nucleus C
IDA
SpoSPAC31G5.05c
GO:0005792 microsome C
ISO
MmuMGI:1913896
GO:0005829 cytosol C
IDA
SpoSPAC31G5.05c
ISS
SpoSPAC31G5.05c
TAS
SceS000003657
GO:0005886 plasma membrane C
IDA
AthAt1g63290
GO:0009507 chloroplast C
IDA
AthAt5g61410
GO:0009570 chloroplast stroma C
IDA
AthAt5g61410
GO:0009579 thylakoid C
IDA
AthAt5g61410
GO:0009941 chloroplast envelope C
IDA
AthAt5g61410
GO:0010319 stromule C
IDA
AthAt5g61410
GO:0048046 apoplast C
IDA
AthAt5g61410
GO:0004750 ribulose-phosphate 3-epimerase
activity		 F
IDA
SceS000003657
IMP
SceS000003657
ISO
MmuMGI:1913896
ISS
AthAt5g61410
At3g01850
At1g63290
SceS000003657
SpoSPAC31G5.05c
GO:0005529 sugar binding F
ISO
MmuMGI:1913896
GO:0048029 monosaccharide binding F
ISO
MmuMGI:1913896
GO:0005975 carbohydrate metabolic process P
ISS
AthAt1g63290
At5g61410
At3g01850
GO:0006098 pentose-phosphate shunt P
IMP
SceS000003657
ISO
MmuMGI:1913896
GO:0009052 pentose-phosphate shunt, non-oxidative
branch		 P
ISO
MmuMGI:1913896
ISS
PfaPFL0960w
SpoSPAC31G5.05c
GO:0009409 response to cold P
IEP
AthAt5g61410
GO:0009624 response to nematode P
IMP
AthAt5g61410
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt5g61410
GO:0043094 cellular metabolic compound salvage P
RCA
SceS000003657

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC31G5.05c
(O14105)		 YJL121C
(S000003657)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC31G5.05c
GO:0005829 cytosol C
IDA
SpoSPAC31G5.05c
ISS
SpoSPAC31G5.05c
TAS
SceS000003657
GO:0004750 ribulose-phosphate 3-epimerase
activity		 F
IDA
SceS000003657
IMP
SceS000003657
ISS
SceS000003657
SpoSPAC31G5.05c
GO:0006098 pentose-phosphate shunt P
IMP
SceS000003657
GO:0009052 pentose-phosphate shunt, non-oxidative
branch		 P
ISS
SpoSPAC31G5.05c
GO:0043094 cellular metabolic compound salvage P
RCA
SceS000003657

Back to the top
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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk