YOGY Home YOGY Help

Search term: YJL173C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RFA3
SGD link S000003709
Alternative ID YJL173C
Description Subunit of heterotrimeric Replication Protein A (RPA), which is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination
Synonyms YJL173C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39377

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RFA3
(S000003709)
GI:6322288
Kluyveromyces lactis (Kla) KLLA0A06490g GI:50302705
Eremothecium gossypii (Ego) AGOS_AEL133C GI:45190474


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000781 chromosome, telomeric region C
IMP
SceS000003709
GO:0000794 condensed nuclear chromosome C
IDA
SceS000003709
GO:0005662 DNA replication factor A complex C
IDA
SceS000003709
GO:0003690 double-stranded DNA binding F
IDA
SceS000003709
GO:0043565 sequence-specific DNA binding F
IDA
SceS000003709
GO:0000722 telomere maintenance via recombination P
IPI
SceS000003709
GO:0000724 double-strand break repair via homologous
recombination
P
IGI
SceS000003709
GO:0006260 DNA replication P
IMP
SceS000003709
GO:0006268 DNA unwinding involved in replication P
IDA
SceS000003709
GO:0006281 DNA repair P
IMP
SceS000003709
GO:0006289 nucleotide-excision repair P
IDA
SceS000003709
GO:0006312 mitotic recombination P
IPI
SceS000003709
GO:0007004 telomere maintenance via telomerase P
IPI
SceS000003709
GO:0007131 reciprocal meiotic recombination P
IPI
SceS000003709
GO:0016567 protein ubiquitination P
IPI
SceS000003709
GO:0030491 heteroduplex formation P
IDA
SceS000003709
GO:0045184 establishment of protein localization P
IPI
SceS000003709

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_31628

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago2373 AEL133C
Candida glabrata (Cgl) cgl434 CAGL0C00341g
Kluyveromyces lactis (Kla) kla286 KLLA0A06490g
Saccharomyces cerevisiae (Sce) sce3438 YJL173C
(S000003709)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000781 chromosome, telomeric region C
IMP
SceS000003709
GO:0000794 condensed nuclear chromosome C
IDA
SceS000003709
GO:0005662 DNA replication factor A complex C
IDA
SceS000003709
GO:0003690 double-stranded DNA binding F
IDA
SceS000003709
GO:0043565 sequence-specific DNA binding F
IDA
SceS000003709
GO:0000722 telomere maintenance via recombination P
IPI
SceS000003709
GO:0000724 double-strand break repair via homologous
recombination
P
IGI
SceS000003709
GO:0006260 DNA replication P
IMP
SceS000003709
GO:0006268 DNA unwinding involved in replication P
IDA
SceS000003709
GO:0006281 DNA repair P
IMP
SceS000003709
GO:0006289 nucleotide-excision repair P
IDA
SceS000003709
GO:0006312 mitotic recombination P
IPI
SceS000003709
GO:0007004 telomere maintenance via telomerase P
IPI
SceS000003709
GO:0007131 reciprocal meiotic recombination P
IPI
SceS000003709
GO:0016567 protein ubiquitination P
IPI
SceS000003709
GO:0030491 heteroduplex formation P
IDA
SceS000003709
GO:0045184 establishment of protein localization P
IPI
SceS000003709

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC23B6.05c
(Q92374)
YJL173C
(S000003709)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000781 chromosome, telomeric region C
IMP
SceS000003709
ISS
SpoSPCC23B6.05c
GO:0000794 condensed nuclear chromosome C
IDA
SceS000003709
GO:0005634 nucleus C
IDA
SpoSPCC23B6.05c
GO:0005662 DNA replication factor A complex C
IDA
SceS000003709
SpoSPCC23B6.05c
GO:0005829 cytosol C
IDA
SpoSPCC23B6.05c
GO:0003690 double-stranded DNA binding F
IDA
SceS000003709
GO:0003697 single-stranded DNA binding F
IDA
SpoSPCC23B6.05c
GO:0043565 sequence-specific DNA binding F
IDA
SceS000003709
GO:0000722 telomere maintenance via recombination P
IPI
SceS000003709
GO:0000723 telomere maintenance P
NAS
SpoSPCC23B6.05c
GO:0000724 double-strand break repair via homologous
recombination
P
IGI
SceS000003709
GO:0006260 DNA replication P
IMP
SceS000003709
GO:0006261 DNA-dependent DNA replication P
ISS
SpoSPCC23B6.05c
GO:0006268 DNA unwinding involved in replication P
IDA
SceS000003709
GO:0006269 DNA replication, synthesis of RNA
primer
P
ISS
SpoSPCC23B6.05c
GO:0006281 DNA repair P
IMP
SceS000003709
ISS
SpoSPCC23B6.05c
GO:0006289 nucleotide-excision repair P
IDA
SceS000003709
GO:0006310 DNA recombination P
ISS
SpoSPCC23B6.05c
GO:0006312 mitotic recombination P
IPI
SceS000003709
GO:0007004 telomere maintenance via telomerase P
IPI
SceS000003709
GO:0007131 reciprocal meiotic recombination P
IPI
SceS000003709
GO:0016567 protein ubiquitination P
IPI
SceS000003709
GO:0030491 heteroduplex formation P
IDA
SceS000003709
GO:0045184 establishment of protein localization P
IPI
SceS000003709

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk