YOGY Home YOGY Help

Search term: YJL177W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPL17B
SGD link S000003713
Alternative ID YJL177W
Description Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Ap and has similarity to E. coli L22 and rat L17 ribosomal proteins
Synonyms YJL177W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3353 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 60S ribosomal protein L22

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g27400 GI:15223501
Arabidopsis thaliana (Ath) At1g67430 GI:15220431
Caenorhabditis elegans (Cel) CE22195
(WBGene00004429)
GI:17510167
Drosophila melanogaster (Dme) 7290748 GI:18921137
Homo sapiens (Hsa) Hs13645542 GI:13645542
Homo sapiens (Hsa) Hs13653804 GI:13653804
Homo sapiens (Hsa) Hs17436951 GI:17436951
Homo sapiens (Hsa) Hs17449313 GI:17449313
Homo sapiens (Hsa) Hs17452148 GI:17452148
Homo sapiens (Hsa) Hs17453140_2 GI:17453140
Homo sapiens (Hsa) Hs17456300 GI:17456300
Homo sapiens (Hsa) Hs17462105 GI:17462105
Homo sapiens (Hsa) Hs17475106 GI:17475106
Homo sapiens (Hsa) Hs17476916 GI:17476916
Homo sapiens (Hsa) Hs18559477 GI:18559477
Homo sapiens (Hsa) Hs18576847 GI:18576847
Homo sapiens (Hsa) Hs18601307 GI:18601307
Homo sapiens (Hsa) Hs20470456 GI:20470456
Homo sapiens (Hsa) Hs20473084 GI:20473084
Homo sapiens (Hsa) Hs20556333 GI:17488390
Homo sapiens (Hsa) Hs22043438 GI:22043438
Homo sapiens (Hsa) Hs22045629 GI:22045629
Homo sapiens (Hsa) Hs22048743 GI:22048743
Homo sapiens (Hsa) Hs22049833 GI:22049833
Homo sapiens (Hsa) Hs22051019 GI:22051019
Homo sapiens (Hsa) Hs22055447 GI:22055447
Homo sapiens (Hsa) Hs22063048 GI:22063048
Homo sapiens (Hsa) Hs4506617 GI:4506617 P18621
Saccharomyces cerevisiae (Sce) YJL177w
(S000003713)
GI:6322284 P46990
Saccharomyces cerevisiae (Sce) YKL180w
(S000001663)
GI:6322668 P05740
Schizosaccharomyces pombe (Spo) SPBC2F12.04 GI:19112503 O14339
Schizosaccharomyces pombe (Spo) SPCC364.03 GI:19075341 O59794
Encephalitozoon cuniculi (Ecu) ECU07g1410 GI:19074563 Q8SRH7


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
AthAt1g67430
GO:0005737 cytoplasm C
IDA
SceS000001663
GO:0005773 vacuole C
IDA
AthAt1g27400
At1g67430
GO:0005829 cytosol C
IDA
SpoSPBC2F12.04
SPCC364.03
GO:0005840 ribosome C
ISS
AthAt1g27400
At1g67430
GO:0005886 plasma membrane C
IDA
AthAt1g27400
GO:0009507 chloroplast C
IDA
AthAt1g27400
GO:0016020 membrane C
IDA
AthAt1g67430
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt1g67430
At1g27400
SceS000003713
S000001663
ISS
SpoSPCC364.03
SPBC2F12.04
GO:0022626 cytosolic ribosome C
IDA
AthAt1g67430
GO:0003735 structural constituent of ribosome F
IDA
SceS000001663
S000003713
ISS
AthAt1g67430
At1g27400
SpoSPBC2F12.04
SPCC364.03
GO:0000003 reproduction P
IMP
CelWBGene00004429
GO:0002119 nematode larval development P
IMP
CelWBGene00004429
GO:0006412 translation P
IDA
SceS000003713
S000001663
ISS
AthAt1g67430
At1g27400
SpoSPBC2F12.04
SPCC364.03
GO:0006417 regulation of translation P
RCA
SceS000003713
S000001663
GO:0007413 axonal fasciculation P
IMP
CelWBGene00004429
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004429
GO:0040007 growth P
IMP
CelWBGene00004429
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004429
GO:0040011 locomotion P
IMP
CelWBGene00004429

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
115574

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPL17 GI:78000186
Pan troglodytes (Ptr) LOC746201 GI:114612609
Pan troglodytes (Ptr) LOC735501 GI:114692311
Pan troglodytes (Ptr) LOC463017 GI:114609411
Canis familiaris (Cfa) RPL17L GI:73962151
Mus musculus (Mmu) Rpl17
(MGI:2448270)
GI:50355690 Q505B1
Rattus norvegicus (Rno) Rpl17
(RGD:1303019)
GI:42627879
Drosophila melanogaster (Dme) RpL17
(FBgn0029897)
GI:24640202
Anopheles gambiae (Aga) AgaP_AGAP001459 GI:57906224
Caenorhabditis elegans (Cel) rpl-17
(CE22195;
WBGene00004429)
GI:25143462
Schizosaccharomyces pombe (Spo) rpl17
(SPBC2F12.04)
GI:19075341 O14339
Schizosaccharomyces pombe (Spo) rpl17
(SPBC2F12.04)
GI:19112503 O14339
Saccharomyces cerevisiae (Sce) RPL17A
(S000001663)
GI:6322668 P05740
Saccharomyces cerevisiae (Sce) RPL17B
(S000003713)
GI:6322284 P46990
Kluyveromyces lactis (Kla) KLLA0A06336g GI:50302693
Eremothecium gossypii (Ego) AGOS_AEL137W GI:45190470
Magnaporthe grisea (Mgr) MGG_09194 GI:39957705
Neurospora crassa (Ncr) NCU03703.1 GI:32404784
Arabidopsis thaliana (Ath) AT1G67430 GI:15220431
Arabidopsis thaliana (Ath) AT1G27400 GI:15223501
Oryza sativa (Osa) Os08g0530200 GI:115477457
Oryza sativa (Osa) Os09g0258600 GI:115478212
Plasmodium falciparum (Pfa) PF13_0268 GI:124513742


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2448270
GO:0005730 nucleolus C
IDA
AthAt1g67430
GO:0005737 cytoplasm C
IDA
SceS000001663
GO:0005773 vacuole C
IDA
AthAt1g27400
At1g67430
GO:0005829 cytosol C
EXP
HsaRPL17
IDA
SpoSPBC2F12.04
GO:0005840 ribosome C
ISS
AthAt1g27400
At1g67430
GO:0005886 plasma membrane C
IDA
AthAt1g27400
GO:0009507 chloroplast C
IDA
AthAt1g27400
GO:0016020 membrane C
IDA
AthAt1g67430
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt1g67430
At1g27400
SceS000003713
S000001663
ISS
DmeFBgn0029897
PfaPF13_0268
SpoSPBC2F12.04
GO:0022626 cytosolic ribosome C
IDA
AthAt1g67430
GO:0003674 molecular_function F
ND
MmuMGI:2448270
GO:0003735 structural constituent of ribosome F
IDA
SceS000001663
S000003713
ISS
AthAt1g67430
At1g27400
DmeFBgn0029897
SpoSPBC2F12.04
GO:0000003 reproduction P
IMP
CelWBGene00004429
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0029897
GO:0002119 nematode larval development P
IMP
CelWBGene00004429
GO:0006412 translation P
IDA
SceS000003713
S000001663
ISS
AthAt1g67430
At1g27400
DmeFBgn0029897
SpoSPBC2F12.04
GO:0006414 translational elongation P
EXP
HsaRPL17
GO:0006417 regulation of translation P
RCA
SceS000003713
S000001663
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0029897
GO:0007413 axonal fasciculation P
IMP
CelWBGene00004429
GO:0008150 biological_process P
ND
MmuMGI:2448270
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004429
GO:0040007 growth P
IMP
CelWBGene00004429
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004429
GO:0040011 locomotion P
IMP
CelWBGene00004429

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_636

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga3547 ENSANGP00000011784
Anopheles gambiae (Aga) aga3548 ENSANGP00000026842
Ashbya gossypii (Ago) ago2369 AEL137W
Arabidopsis thaliana (Ath) ath2864 At1g27400.1
Arabidopsis thaliana (Ath) ath5976 At1g67430.1
Caenorhabditis elegans (Cel) cel19309 Y48G8AL.8a
(CE22195;
WBGene00004429)
Candida glabrata (Cgl) cgl5009 CAGL0M08118g
Cryptococcus neoformans (Cne) cne2794 183.m01735
Dictyostelium discoideum (Ddi) ddi13357 DDB0229959
Debaryomyces hansenii (Dha) dha4787 DEHA0F09119g
Drosophila melanogaster (Dme) dme16767 CG3203-PA
(FBgn0029897)
Drosophila melanogaster (Dme) dme16764 CG3203-PB
(FBgn0029897)
Drosophila melanogaster (Dme) dme16765 CG3203-PC
(FBgn0029897)
Drosophila melanogaster (Dme) dme16766 CG3203-PD
(FBgn0029897)
Danio rerio (Dre) dre13416 ENSDARP00000047976
Danio rerio (Dre) dre13411 ENSDARP00000048954
Encephalitozoon cuniculi (Ecu) ecu1949 19074563
Takifugu rubripes (Fru) fru27520 SINFRUP00000137740
Gallus gallus (Gga) gga24088 ENSGALP00000004243
Homo sapiens (Hsa) hsa10856 ENSP00000347049
Homo sapiens (Hsa) hsa1378 ENSP00000355102
Kluyveromyces lactis (Kla) kla280 KLLA0A06336g
Mus musculus (Mmu) mmu9088 ENSMUSP00000075008
Mus musculus (Mmu) mmu19732 ENSMUSP00000075264
Mus musculus (Mmu) mmu5773 ENSMUSP00000076965
Mus musculus (Mmu) mmu18290 ENSMUSP00000078585
Mus musculus (Mmu) mmu12921 ENSMUSP00000078654
(MGI:2448270)
Q6ZWZ7
Mus musculus (Mmu) mmu30267 ENSMUSP00000080326
Neurospora crassa (Ncr) ncr3594 NCU03703.2
Oryza sativa (Osa) osa45993 5695.m00125
Oryza sativa (Osa) osa46034 5696.m00178
Oryza sativa (Osa) osa51211 5970.m00142
Oryza sativa (Osa) osa78306 7376.m00124
Oryza sativa (Osa) osa78758 7389.m00112
Plasmodium falciparum (Pfa) pfa3785 PF13_0268
Rattus norvegicus (Rno) rno14389 ENSRNOP00000025217
(RGD:1303019)
P24049
Rattus norvegicus (Rno) rno14390 ENSRNOP00000029543
Rattus norvegicus (Rno) rno19303 ENSRNOP00000039774
Saccharomyces cerevisiae (Sce) sce3442 YJL177W
(S000003713)
Saccharomyces cerevisiae (Sce) sce3854 YKL180W
(S000001663)
Schizosaccharomyces pombe (Spo) spo44 SPBC2F12.04 O14339
Schizosaccharomyces pombe (Spo) spo442 SPCC364.03 O59794
Yarrowia lipolytica (Yli) yli2358 YALI0C15895g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2448270
GO:0005730 nucleolus C
IDA
AthAt1g67430
GO:0005737 cytoplasm C
IDA
SceS000001663
GO:0005773 vacuole C
IDA
AthAt1g27400
At1g67430
GO:0005829 cytosol C
IDA
SpoSPBC2F12.04
SPCC364.03
GO:0005840 ribosome C
ISS
AthAt1g27400
At1g67430
GO:0005886 plasma membrane C
IDA
AthAt1g27400
GO:0009507 chloroplast C
IDA
AthAt1g27400
GO:0016020 membrane C
IDA
AthAt1g67430
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt1g67430
At1g27400
SceS000003713
S000001663
ISS
DmeFBgn0029897
PfaPF13_0268
SpoSPCC364.03
SPBC2F12.04
GO:0022626 cytosolic ribosome C
IDA
AthAt1g67430
GO:0003674 molecular_function F
ND
MmuMGI:2448270
GO:0003735 structural constituent of ribosome F
IDA
SceS000001663
S000003713
ISS
AthAt1g67430
At1g27400
DmeFBgn0029897
SpoSPBC2F12.04
SPCC364.03
GO:0000003 reproduction P
IMP
CelWBGene00004429
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0029897
GO:0002119 nematode larval development P
IMP
CelWBGene00004429
GO:0006412 translation P
IDA
SceS000003713
S000001663
ISS
AthAt1g67430
At1g27400
DmeFBgn0029897
SpoSPBC2F12.04
SPCC364.03
GO:0006417 regulation of translation P
RCA
SceS000003713
S000001663
GO:0007052 mitotic spindle organization P
IMP
Dme