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Search term: YJL197W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name UBP12
SGD link S000003733
Alternative ID YJL197W
Description Ubiquitin carboxyl-terminal hydrolase, ubiquitin-specific protease present in the nucleus and cytoplasm that cleaves ubiquitin from ubiquitinated proteins
Synonyms YJL197W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1870 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Ubiquitin C-terminal hydrolase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g32850 GI:15223316
Arabidopsis thaliana (Ath) At1g48350 GI:15221153
Arabidopsis thaliana (Ath) At2g40930 GI:7487236
Arabidopsis thaliana (Ath) At3g20230 GI:18402538
Arabidopsis thaliana (Ath) At3g45020 GI:15230579
Arabidopsis thaliana (Ath) At4g10570 GI:15235171
Arabidopsis thaliana (Ath) At4g10590 GI:7487641
Arabidopsis thaliana (Ath) At5g27820 GI:15241056
Caenorhabditis elegans (Cel) CE03146
(WBGene00008547)		 GI:17532903 Q19132
Caenorhabditis elegans (Cel) CE11978 GI:17568769
Caenorhabditis elegans (Cel) CE19500
(WBGene00019259)		 GI:17541074 Q9TYY8
Caenorhabditis elegans (Cel) CE29635 GI:17556877
Caenorhabditis elegans (Cel) CE29636 GI:17556879
Drosophila melanogaster (Dme) 7291841 GI:7291841
Drosophila melanogaster (Dme) 7293731 GI:7293731
Drosophila melanogaster (Dme) 7303210 GI:20129983
Homo sapiens (Hsa) Hs14149627
(USP15)		 GI:14149627 Q9Y4E8
Homo sapiens (Hsa) Hs14211903 GI:14211903
Homo sapiens (Hsa) Hs20472401 GI:20472401
Homo sapiens (Hsa) Hs21489975 GI:18698435 Q9Y417
Homo sapiens (Hsa) Hs21956647 GI:4128039 O95482
Homo sapiens (Hsa) Hs22063256 GI:22063256
Homo sapiens (Hsa) Hs22063331 GI:22063331
Homo sapiens (Hsa) Hs22065611 GI:22065611
Homo sapiens (Hsa) Hs22066147_1 GI:22066147
Homo sapiens (Hsa) Hs22066171 GI:22066171
Homo sapiens (Hsa) Hs22068900 GI:22068900
Homo sapiens (Hsa) Hs4507853 GI:4507853
Homo sapiens (Hsa) Hs4758564_2 GI:4758564
Homo sapiens (Hsa) Hs4759290 GI:4759290
Homo sapiens (Hsa) Hs5730108 GI:5730108
Homo sapiens (Hsa) HsM18874088 GI:18874088
Saccharomyces cerevisiae (Sce) YJL197w
(S000003733)		 GI:6322264 P39538
Saccharomyces cerevisiae (Sce) YNL186w
(S000005130)		 GI:6324143 P53874
Schizosaccharomyces pombe (Spo) SPCC1494.05c GI:19076030 O60079
Schizosaccharomyces pombe (Spo) SPCC16A11.12c GI:19075499 Q9USM5
Encephalitozoon cuniculi (Ecu) ECU06g0910 GI:19074341 Q8SRQ2


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt4g10590
At4g10570
At1g32850
SpoSPCC16A11.12c
GO:0005634 nucleus C
IDA
SceS000003733
S000005130
SpoSPCC1494.05c
ISS
AthAt2g40930
TAS
SpoSPCC1494.05c
GO:0005737 cytoplasm C
IDA
SceS000003733
GO:0005829 cytosol C
IDA
SpoSPCC1494.05c
GO:0005840 ribosome C
ISS
AthAt1g48350
At5g27820
At3g20230
GO:0009507 chloroplast C
IDA
AthAt1g48350
GO:0009941 chloroplast envelope C
IDA
AthAt1g48350
GO:0003735 structural constituent of ribosome F
ISS
AthAt1g48350
At5g27820
At3g20230
GO:0004197 cysteine-type endopeptidase activity F
ISS
AthAt1g32850
At4g10570
At4g10590
TAS
HsaUSP15
GO:0004221 ubiquitin thiolesterase activity F
ISS
AthAt1g32850
At4g10570
At4g10590
SpoSPCC1494.05c
GO:0004843 ubiquitin-specific protease activity F
IDA
AthAt2g40930
HsaUSP15
SceS000005130
ISS
AthAt2g40930
TAS
SceS000003733
GO:0005515 protein binding F
IPI
HsaUSP15
GO:0006348 chromatin silencing at telomere P
IMP
SceS000005130
GO:0006412 translation P
ISS
AthAt1g48350
At3g20230
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
ISS
AthAt4g10590
At4g10570
At1g32850
TAS
AthAt2g40930
SpoSPCC1494.05c
GO:0008150 biological_process P
ND
SceS000003733
GO:0016579 protein deubiquitination P
IDA
HsaUSP15
SceS000005130
IMP
SceS000005130
TAS
SceS000005130
SpoSPCC1494.05c
GO:0042254 ribosome biogenesis P
ISS
AthAt5g27820
At1g48350

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
101466

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) UBP12
(S000003733)		 GI:6322264 P39538
Kluyveromyces lactis (Kla) KLLA0C03476g GI:50304791
Eremothecium gossypii (Ego) AGOS_AFR627C GI:45199145


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000003733
GO:0005737 cytoplasm C
IDA
SceS000003733
GO:0004843 ubiquitin-specific protease activity F
TAS
SceS000003733
GO:0008150 biological_process P
ND
SceS000003733

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_440

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago3819 AFR627C
Arabidopsis thaliana (Ath) ath3439 At1g32850.1
Arabidopsis thaliana (Ath) ath11240 At2g40930.1
Arabidopsis thaliana (Ath) ath18790 At4g10570.1
Arabidopsis thaliana (Ath) ath18791 At4g10590.1
Arabidopsis thaliana (Ath) ath18792 At4g10590.2
Arabidopsis thaliana (Ath) ath24428 At5g22030.1
Arabidopsis thaliana (Ath) ath24429 At5g22030.2
Caenorhabditis elegans (Cel) cel11474 H34C03.2
(CE19500;
WBGene00019259)
Candida glabrata (Cgl) cgl4146 CAGL0L01639g
Cryptococcus neoformans (Cne) cne4455 177.m03208
Dictyostelium discoideum (Ddi) ddi10514 DDB0192113
Debaryomyces hansenii (Dha) dha6444 DEHA0G16676g
Danio rerio (Dre) dre22301 ENSDARP00000003579
Danio rerio (Dre) dre22302 ENSDARP00000006361
Danio rerio (Dre) dre20724 ENSDARP00000031587
Danio rerio (Dre) dre20726 ENSDARP00000039867
Danio rerio (Dre) dre22300 ENSDARP00000042205
Danio rerio (Dre) dre20727 ENSDARP00000048539
Takifugu rubripes (Fru) fru9792 SINFRUP00000128620
Takifugu rubripes (Fru) fru32328 SINFRUP00000141524
Takifugu rubripes (Fru) fru32329 SINFRUP00000141529
Takifugu rubripes (Fru) fru3841 SINFRUP00000150818
Takifugu rubripes (Fru) fru3842 SINFRUP00000150819
Takifugu rubripes (Fru) fru9791 SINFRUP00000166852
Takifugu rubripes (Fru) fru9790 SINFRUP00000166923
Takifugu rubripes (Fru) fru3843 SINFRUP00000169986
Gallus gallus (Gga) gga5026 ENSGALP00000006014
(USP4)
Gallus gallus (Gga) gga5027 ENSGALP00000006015
Gallus gallus (Gga) gga5025 ENSGALP00000006016
(USP4)		 Q5ZKD8
Gallus gallus (Gga) gga412 ENSGALP00000015876
(USP15)
Gallus gallus (Gga) gga413 ENSGALP00000015877
(USP15)
Homo sapiens (Hsa) hsa32697 ENSP00000218348
(USP11)		 P51784
Homo sapiens (Hsa) hsa7792 ENSP00000258123
(USP15)		 Q9Y4E8-2
Homo sapiens (Hsa) hsa22481 ENSP00000265560
(USP4)		 Q13107-1
Homo sapiens (Hsa) hsa7790 ENSP00000280377
(USP15)		 Q9Y4E8-1
Homo sapiens (Hsa) hsa22480 ENSP00000341028
(USP4)		 Q13107-2
Kluyveromyces lactis (Kla) kla1350 KLLA0C03476g
Mus musculus (Mmu) mmu2926 ENSMUSP00000020330
Mus musculus (Mmu) mmu2927 ENSMUSP00000020334
(MGI:101857)		 Q8R5H1-1
Mus musculus (Mmu) mmu28757 ENSMUSP00000033383
(MGI:2384312)		 B1AXB2
Mus musculus (Mmu) mmu28291 ENSMUSP00000035237
(MGI:98905)		 Q3TEX8
Mus musculus (Mmu) mmu28292 ENSMUSP00000075712
(MGI:98905)		 Q921M8
Neurospora crassa (Ncr) ncr466 NCU00480.2
Oryza sativa (Osa) osa4809 2118.m00072
Oryza sativa (Osa) osa52145 5997.m00170
Oryza sativa (Osa) osa68631 7024.m00132
Oryza sativa (Osa) osa71205 7159.m00192
Plasmodium falciparum (Pfa) pfa3616 PFE0835w
Rattus norvegicus (Rno) rno30789 ENSRNOP00000012705
Rattus norvegicus (Rno) rno26857 ENSRNOP00000034485
(RGD:628795)		 Q9R085
Rattus norvegicus (Rno) rno30792 ENSRNOP00000039016
Rattus norvegicus (Rno) rno30791 ENSRNOP00000042897
(RGD:1303052)		 Q0D2L8
Rattus norvegicus (Rno) rno30790 ENSRNOP00000045777
Rattus norvegicus (Rno) rno26858 ENSRNOP00000047829
Saccharomyces cerevisiae (Sce) sce3463 YJL197W
(S000003733)
Schizosaccharomyces pombe (Spo) spo4070 SPCC1494.05c O60079
Yarrowia lipolytica (Yli) yli1344 YALI0B14597g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt4g10590
At4g10570
At1g32850
MmuMGI:2384312
GO:0005634 nucleus C
IDA
SceS000003733
SpoSPCC1494.05c
ISS
AthAt2g40930
TAS
SpoSPCC1494.05c
GO:0005737 cytoplasm C
IDA
SceS000003733
GO:0005829 cytosol C
IDA
SpoSPCC1494.05c
GO:0003674 molecular_function F
ND
MmuMGI:2384312
GO:0004197 cysteine-type endopeptidase activity F
ISS
AthAt1g32850
At4g10570
At4g10590
GO:0004221 ubiquitin thiolesterase activity F
ISS
AthAt1g32850
At4g10570
At4g10590
SpoSPCC1494.05c
GO:0004843 ubiquitin-specific protease activity F
IDA
AthAt2g40930
MmuMGI:101857
ISO
MmuMGI:101857
ISS
AthAt5g22030
At2g40930
TAS
SceS000003733
GO:0005515 protein binding F
IPI
MmuMGI:98905
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
ISS
AthAt4g10590
At4g10570
At1g32850
TAS
AthAt2g40930
SpoSPCC1494.05c
GO:0008150 biological_process P
ND
MmuMGI:2384312
SceS000003733
GO:0008152 metabolic process P
IDA
MmuMGI:101857
GO:0016579 protein deubiquitination P
ISS
PfaPFE0835w
TAS
SpoSPCC1494.05c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC1494.05c
(O60079)		 YJL197W
(S000003733)
SPCC16A11.12c
(Q9USM5)		 YJL197W
(S000003733)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SpoSPCC16A11.12c
GO:0005634 nucleus C
IDA
SceS000003733
SpoSPCC1494.05c
TAS
SpoSPCC1494.05c
GO:0005737 cytoplasm C
IDA
SceS000003733
GO:0005829 cytosol C
IDA
SpoSPCC1494.05c
GO:0004221 ubiquitin thiolesterase activity F
ISS
SpoSPCC1494.05c
GO:0004843 ubiquitin-specific protease activity F
TAS
SceS000003733
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
TAS
SpoSPCC1494.05c
GO:0008150 biological_process P
ND
SceS000003733
GO:0016579 protein deubiquitination P
TAS
SpoSPCC1494.05c

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GO info in one table:

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