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Search term: YJR006W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name POL31
SGD link S000003766
Alternative ID YJR006W
Description DNA polymerase III (delta) subunit, essential for cell viability; involved in DNA replication and DNA repair
Synonyms YJR006W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2732 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING DNA polymerase delta, regulatory subunit 55

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g42120 GI:15227506
Caenorhabditis elegans (Cel) CE05595
(WBGene00008722)		 GI:17539782 Q19366
Drosophila melanogaster (Dme) 7292154 GI:13431497
Homo sapiens (Hsa) Hs5453924 GI:5453924 P49005
Homo sapiens (Hsa) Hs20545789 GI:20545789
Saccharomyces cerevisiae (Sce) YJR006w
(S000003766)		 GI:6322465 P46957
Schizosaccharomyces pombe (Spo) SPAC27E2.05 GI:19115318 P87324
Encephalitozoon cuniculi (Ecu) ECU09g0770 GI:19173199


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC27E2.05
GO:0005829 cytosol C
IDA
SpoSPAC27E2.05
GO:0043596 nuclear replication fork C
IC
SpoSPAC27E2.05
GO:0043625 delta DNA polymerase complex C
TAS
SceS000003766
SpoSPAC27E2.05
GO:0003887 DNA-directed DNA polymerase activity F
IDA
SceS000003766
TAS
SceS000003766
SpoSPAC27E2.05
GO:0005515 protein binding F
IPI
SpoSPAC27E2.05
GO:0008310 single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity		 F
TAS
SceS000003766
GO:0008408 3'-5' exonuclease activity F
IC
SpoSPAC27E2.05
GO:0000003 reproduction P
IMP
CelWBGene00008722
GO:0000723 telomere maintenance P
IMP
SpoSPAC27E2.05
GO:0000731 DNA synthesis involved in DNA repair P
TAS
SpoSPAC27E2.05
GO:0006271 DNA strand elongation involved in DNA
replication		 P
TAS
SpoSPAC27E2.05
GO:0006272 leading strand elongation P
TAS
SceS000003766
GO:0006273 lagging strand elongation P
TAS
SceS000003766
GO:0006278 RNA-dependent DNA replication P
IDA
SceS000003766
GO:0006284 base-excision repair P
TAS
SceS000003766
GO:0006289 nucleotide-excision repair P
TAS
SceS000003766
GO:0006298 mismatch repair P
TAS
SceS000003766
GO:0006301 postreplication repair P
TAS
SceS000003766
GO:0007346 regulation of mitotic cell cycle P
IMP
SpoSPAC27E2.05
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00008722
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00008722
GO:0040011 locomotion P
IMP
CelWBGene00008722
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00008722
GO:0043137 DNA replication, removal of RNA
primer		 P
IDA
SceS000003766
TAS
SpoSPAC27E2.05

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
101606

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) cdc1
(SPAC27E2.05)		 GI:19115318 P87324
Saccharomyces cerevisiae (Sce) POL31
(S000003766)		 GI:6322465 P46957
Kluyveromyces lactis (Kla) KLLA0F14949g GI:50311455
Eremothecium gossypii (Ego) AGOS_AAL132C GI:45184692
Magnaporthe grisea (Mgr) MGG_02459 GI:145606210
Neurospora crassa (Ncr) NCU03763.1 GI:32404904


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC27E2.05
GO:0005829 cytosol C
IDA
SpoSPAC27E2.05
GO:0043596 nuclear replication fork C
IC
SpoSPAC27E2.05
GO:0043625 delta DNA polymerase complex C
TAS
SceS000003766
SpoSPAC27E2.05
GO:0003887 DNA-directed DNA polymerase activity F
IDA
SceS000003766
TAS
SceS000003766
SpoSPAC27E2.05
GO:0005515 protein binding F
IPI
SpoSPAC27E2.05
GO:0008310 single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity		 F
TAS
SceS000003766
GO:0008408 3'-5' exonuclease activity F
IC
SpoSPAC27E2.05
GO:0000723 telomere maintenance P
IMP
SpoSPAC27E2.05
GO:0000731 DNA synthesis involved in DNA repair P
TAS
SpoSPAC27E2.05
GO:0006271 DNA strand elongation involved in DNA
replication		 P
TAS
SpoSPAC27E2.05
GO:0006272 leading strand elongation P
TAS
SceS000003766
GO:0006273 lagging strand elongation P
TAS
SceS000003766
GO:0006278 RNA-dependent DNA replication P
IDA
SceS000003766
GO:0006284 base-excision repair P
TAS
SceS000003766
GO:0006289 nucleotide-excision repair P
TAS
SceS000003766
GO:0006298 mismatch repair P
TAS
SceS000003766
GO:0006301 postreplication repair P
TAS
SceS000003766
GO:0007346 regulation of mitotic cell cycle P
IMP
SpoSPAC27E2.05
GO:0043137 DNA replication, removal of RNA
primer		 P
IDA
SceS000003766
TAS
SpoSPAC27E2.05

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2310

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga10982 ENSANGP00000013916
Ashbya gossypii (Ago) ago55 AAL132C
Arabidopsis thaliana (Ath) ath11378 At2g42120.1
Arabidopsis thaliana (Ath) ath11379 At2g42120.2
Caenorhabditis elegans (Cel) cel6115 F12F6.7
(CE05595;
WBGene00008722)
Candida glabrata (Cgl) cgl367 CAGL0B03707g
Cryptococcus neoformans (Cne) cne4647 186.m03491
Dictyostelium discoideum (Ddi) ddi5513 DDB0204579
Debaryomyces hansenii (Dha) dha6666 DEHA0G21637g
Drosophila melanogaster (Dme) dme7496 CG12018-PA
(FBgn0027903)
Danio rerio (Dre) dre22911 ENSDARP00000000065
Encephalitozoon cuniculi (Ecu) ecu1350 19173199
Takifugu rubripes (Fru) fru724 SINFRUP00000156264
Homo sapiens (Hsa) hsa28533 ENSP00000223361
(POLD2)		 C9JEQ6
Kluyveromyces lactis (Kla) kla4752 KLLA0F14949g
Mus musculus (Mmu) mmu3225 ENSMUSP00000020765
Neurospora crassa (Ncr) ncr3653 NCU03763.2
Oryza sativa (Osa) osa13513 2944.m00126
Oryza sativa (Osa) osa54292 6074.m00071
Oryza sativa (Osa) osa64622 6806.m00113
Plasmodium falciparum (Pfa) pfa2733 PFC0340w
Rattus norvegicus (Rno) rno10697 ENSRNOP00000019288
(RGD:1304954)		 Q6AXY4
Saccharomyces cerevisiae (Sce) sce3500 YJR006W
(S000003766)
Schizosaccharomyces pombe (Spo) spo3751 SPAC27E2.05 P87324
Yarrowia lipolytica (Yli) yli2915 YALI0D05093g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC27E2.05
GO:0005829 cytosol C
IDA
SpoSPAC27E2.05
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0027903
GO:0043596 nuclear replication fork C
IC
SpoSPAC27E2.05
GO:0043625 delta DNA polymerase complex C
ISS
DmeFBgn0027903
PfaPFC0340w
NAS
DmeFBgn0027903
TAS
SceS000003766
SpoSPAC27E2.05
GO:0003887 DNA-directed DNA polymerase activity F
IDA
SceS000003766
ISS
DmeFBgn0027903
PfaPFC0340w
NAS
DmeFBgn0027903
TAS
SceS000003766
SpoSPAC27E2.05
GO:0005515 protein binding F
IPI
SpoSPAC27E2.05
GO:0008310 single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity		 F
TAS
SceS000003766
GO:0008408 3'-5' exonuclease activity F
IC
SpoSPAC27E2.05
GO:0000003 reproduction P
IMP
CelWBGene00008722
GO:0000723 telomere maintenance P
IMP
SpoSPAC27E2.05
GO:0000731 DNA synthesis involved in DNA repair P
TAS
SpoSPAC27E2.05
GO:0006260 DNA replication P
NAS
DmeFBgn0027903
GO:0006271 DNA strand elongation involved in DNA
replication		 P
TAS
SpoSPAC27E2.05
GO:0006272 leading strand elongation P
TAS
SceS000003766
GO:0006273 lagging strand elongation P
TAS
SceS000003766
GO:0006278 RNA-dependent DNA replication P
IDA
SceS000003766
GO:0006284 base-excision repair P
TAS
SceS000003766
GO:0006289 nucleotide-excision repair P
TAS
SceS000003766
GO:0006298 mismatch repair P
TAS
SceS000003766
GO:0006301 postreplication repair P
TAS
SceS000003766
GO:0006974 response to DNA damage stimulus P
IMP
DmeFBgn0027903
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0027903
GO:0007346 regulation of mitotic cell cycle P
IMP
SpoSPAC27E2.05
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00008722
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00008722
GO:0040011 locomotion P
IMP
CelWBGene00008722
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00008722
GO:0043137 DNA replication, removal of RNA
primer		 P
IDA
SceS000003766
TAS
SpoSPAC27E2.05

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC27E2.05
(P87324)		 YJR006W
(S000003766)