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Search term: YJR016C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ILV3
SGD link S000003777
Alternative ID YJR016C
Description Dihydroxyacid dehydratase, catalyzes third step in the common pathway leading to biosynthesis of branched-chain amino acids
Synonyms YJR016C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2448 A---YP-

KOGs classification KOGs description
METABOLISM Dihydroxy-acid dehydratase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g23940 GI:15229546
Saccharomyces cerevisiae (Sce) YJR016c
(S000003777)		 GI:6322476 P39522
Schizosaccharomyces pombe (Spo) SPAC17G8.06c GI:19114641 Q10318


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000003777
SpoSPAC17G8.06c
ISS
SpoSPAC17G8.06c
GO:0009507 chloroplast C
IDA
AthAt3g23940
GO:0009570 chloroplast stroma C
IDA
AthAt3g23940
GO:0003824 catalytic activity F
ISS
AthAt3g23940
GO:0004160 dihydroxy-acid dehydratase activity F
IMP
SceS000003777
ISS
SpoSPAC17G8.06c
GO:0005507 copper ion binding F
IDA
AthAt3g23940
GO:0006082 organic acid metabolic process P
RCA
SceS000003777
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000003777
GO:0006551 leucine metabolic process P
ISS
SpoSPAC17G8.06c
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000003777
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000003777
GO:0009082 branched chain family amino acid biosynthetic
process		 P
IMP
SceS000003777
GO:0009097 isoleucine biosynthetic process P
ISS
SpoSPAC17G8.06c
GO:0009099 valine biosynthetic process P
ISS
SpoSPAC17G8.06c
GO:0009555 pollen development P
IMP
AthAt3g23940

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6276

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC17G8.06c GI:19114641 Q10318
Saccharomyces cerevisiae (Sce) ILV3
(S000003777)		 GI:6322476 P39522
Kluyveromyces lactis (Kla) KLLA0F22022g GI:50312063
Eremothecium gossypii (Ego) AGOS_ACL117W GI:45185571
Magnaporthe grisea (Mgr) MGG_05345 GI:145615051
Neurospora crassa (Ncr) NCU04579.1 GI:32406644
Arabidopsis thaliana (Ath) AT3G23940 GI:15229546
Oryza sativa (Osa) Os08g0559600 GI:115477815


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000003777
SpoSPAC17G8.06c
ISS
SpoSPAC17G8.06c
GO:0009507 chloroplast C
IDA
AthAt3g23940
GO:0009570 chloroplast stroma C
IDA
AthAt3g23940
GO:0003824 catalytic activity F
ISS
AthAt3g23940
GO:0004160 dihydroxy-acid dehydratase activity F
IMP
SceS000003777
ISS
SpoSPAC17G8.06c
GO:0005507 copper ion binding F
IDA
AthAt3g23940
GO:0006082 organic acid metabolic process P
RCA
SceS000003777
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000003777
GO:0006551 leucine metabolic process P
ISS
SpoSPAC17G8.06c
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000003777
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000003777
GO:0009082 branched chain family amino acid biosynthetic
process		 P
IMP
SceS000003777
GO:0009097 isoleucine biosynthetic process P
ISS
SpoSPAC17G8.06c
GO:0009099 valine biosynthetic process P
ISS
SpoSPAC17G8.06c
GO:0009555 pollen development P
IMP
AthAt3g23940

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2994

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga13735 ENSANGP00000026892
Ashbya gossypii (Ago) ago932 ACL117W
Arabidopsis thaliana (Ath) ath14716 At3g23940.1
Candida glabrata (Cgl) cgl378 CAGL0B03993g
Cryptococcus neoformans (Cne) cne1289 180.m00234
Debaryomyces hansenii (Dha) dha2989 DEHA0D15400g
Escherichia coli (Eco) eco3641 49176404
Kluyveromyces lactis (Kla) kla5063 KLLA0F22022g
Neurospora crassa (Ncr) ncr4448 NCU04579.2
Neurospora crassa (Ncr) ncr5522 NCU05683.2
Oryza sativa (Osa) osa44791 5623.m00443
Saccharomyces cerevisiae (Sce) sce3511 YJR016C
(S000003777)
Schizosaccharomyces pombe (Spo) spo711 SPAC17G8.06c Q10318
Yarrowia lipolytica (Yli) yli2660 YALI0C23408g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000003777
SpoSPAC17G8.06c
ISS
SpoSPAC17G8.06c
GO:0009507 chloroplast C
IDA
AthAt3g23940
GO:0009570 chloroplast stroma C
IDA
AthAt3g23940
GO:0003824 catalytic activity F
ISS
AthAt3g23940
GO:0004160 dihydroxy-acid dehydratase activity F
IMP
SceS000003777
ISS
SpoSPAC17G8.06c
GO:0005507 copper ion binding F
IDA
AthAt3g23940
GO:0006082 organic acid metabolic process P
RCA
SceS000003777
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000003777
GO:0006551 leucine metabolic process P
ISS
SpoSPAC17G8.06c
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000003777
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000003777
GO:0009082 branched chain family amino acid biosynthetic
process		 P
IMP
SceS000003777
GO:0009097 isoleucine biosynthetic process P
ISS
SpoSPAC17G8.06c
GO:0009099 valine biosynthetic process P
ISS
SpoSPAC17G8.06c
GO:0009555 pollen development P
IMP
AthAt3g23940

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC17G8.06c
(Q10318)		 YJR016C
(S000003777)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000003777
SpoSPAC17G8.06c
ISS
SpoSPAC17G8.06c
GO:0004160 dihydroxy-acid dehydratase activity F
IMP
SceS000003777
ISS
SpoSPAC17G8.06c
GO:0006082 organic acid metabolic process P
RCA
SceS000003777
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000003777
GO:0006551 leucine metabolic process P
ISS
SpoSPAC17G8.06c
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000003777
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000003777
GO:0009082 branched chain family amino acid biosynthetic
process		 P
IMP
SceS000003777
GO:0009097 isoleucine biosynthetic process P
ISS
SpoSPAC17G8.06c
GO:0009099 valine biosynthetic process P
ISS
SpoSPAC17G8.06c

Back to the top
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