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Search term: YJR040W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name GEF1
SGD link S000003801
Alternative ID YJR040W
Description Voltage-gated chloride channel localized to the golgi, the endosomal system, and plasma membrane, and involved in cation homeostasis; highly homologous to vertebrate voltage-gated chloride channels
Synonyms YJR040W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

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Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0475 ACDHYP-

KOGs classification KOGs description
METABOLISM Cl- channel CLC-3 and related proteins (CLC superfamily)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g55620 GI:15222752
Arabidopsis thaliana (Ath) At4g35440 GI:7485515
Caenorhabditis elegans (Cel) CE27360
(WBGene00000532)
GI:17532615 Q17804
Drosophila melanogaster (Dme) 7294189 GI:7294189
Homo sapiens (Hsa) Hs4502869 GI:4502869
Homo sapiens (Hsa) Hs4502871 GI:4502871
Homo sapiens (Hsa) Hs4557473 GI:4557473 P51795
Homo sapiens (Hsa) Hs17452732 GI:17452732
Saccharomyces cerevisiae (Sce) YCR001w GI:6319846
Saccharomyces cerevisiae (Sce) YJR040w
(S000003801)
GI:6322500 P37020
Schizosaccharomyces pombe (Spo) SPBC19C7.11 GI:19112959 O60159
Schizosaccharomyces pombe (Spo) SPBC887.02 GI:19113268 O94287
Arabidopsis thaliana (Ath) At1g55620 GI:15222752
Arabidopsis thaliana (Ath) At4g35440 GI:7485515
Caenorhabditis elegans (Cel) CE27360
(WBGene00000532)
GI:17532615 Q17804
Drosophila melanogaster (Dme) 7294189 GI:7294189
Homo sapiens (Hsa) Hs4502869 GI:4502869
Homo sapiens (Hsa) Hs4502871 GI:4502871
Homo sapiens (Hsa) Hs4557473 GI:4557473 P51795
Homo sapiens (Hsa) Hs17452732 GI:17452732
Saccharomyces cerevisiae (Sce) YCR001w GI:6319846
Saccharomyces cerevisiae (Sce) YJR040w
(S000003801)
GI:6322500 P37020
Schizosaccharomyces pombe (Spo) SPBC19C7.11 GI:19112959 O60159
Schizosaccharomyces pombe (Spo) SPBC887.02 GI:19113268 O94287
Arabidopsis thaliana (Ath) At1g55620 GI:15222752
Arabidopsis thaliana (Ath) At4g35440 GI:7485515
Caenorhabditis elegans (Cel) CE27360
(WBGene00000532)
GI:17532615 Q17804
Drosophila melanogaster (Dme) 7294189 GI:7294189
Homo sapiens (Hsa) Hs4502869 GI:4502869
Homo sapiens (Hsa) Hs4502871 GI:4502871
Homo sapiens (Hsa) Hs4557473 GI:4557473 P51795
Homo sapiens (Hsa) Hs17452732 GI:17452732
Saccharomyces cerevisiae (Sce) YCR001w GI:6319846
Saccharomyces cerevisiae (Sce) YJR040w
(S000003801)
GI:6322500 P37020
Schizosaccharomyces pombe (Spo) SPBC19C7.11 GI:19112959 O60159
Schizosaccharomyces pombe (Spo) SPBC887.02 GI:19113268 O94287


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000324 fungal-type vacuole C
IDA
SceS000003801
GO:0005768 endosome C
IDA
SceS000003801
ISS
SpoSPBC19C7.11
GO:0005783 endoplasmic reticulum C
IDA
SceS000003801
GO:0005794 Golgi apparatus C
IDA
AthAt1g55620
SceS000003801
ISS
SpoSPBC19C7.11
GO:0005797 Golgi medial cisterna C
IDA
SceS000003801
GO:0005886 plasma membrane C
IDA
SceS000003801
GO:0009507 chloroplast C
IDA
AthAt1g55620
GO:0009535 chloroplast thylakoid membrane C
IDA
AthAt4g35440
GO:0016020 membrane C
ISS
AthAt4g35440
At1g55620
GO:0016021 integral to membrane C
ISS
SpoSPBC887.02
GO:0005247 voltage-gated chloride channel
activity
F
IDA
SceS000003801
ISS
AthAt4g35440
At1g55620
SpoSPBC887.02
SPBC19C7.11
GO:0000003 reproduction P
IMP
CelWBGene00000532
GO:0006821 chloride transport P
IC
SpoSPBC19C7.11
ISS
AthAt1g55620
At4g35440
SpoSPBC887.02
GO:0006878 cellular copper ion homeostasis P
IMP
SceS000003801
GO:0006879 cellular iron ion homeostasis P
IMP
SceS000003801
GO:0030003 cellular cation homeostasis P
ISS
SpoSPBC19C7.11
GO:0034765 regulation of ion transmembrane
transport
P
ISS
SpoSPBC19C7.11
SPBC887.02
GO:0044070 regulation of anion transport P
ISS
SpoSPBC19C7.11
SPBC887.02

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
73872

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) CLCN5 GI:189217921
Canis familiaris (Cfa) CLCN5 GI:74007416
Mus musculus (Mmu) Clcn5
(MGI:99486)
GI:31980678 Q3UL16
Rattus norvegicus (Rno) Clcn5
(RGD:2362)
GI:8393141 44486
Gallus gallus (Gga) CLCN5 GI:118089513
Schizosaccharomyces pombe (Spo) SPBC19C7.11 GI:19112959 O60159
Saccharomyces cerevisiae (Sce) GEF1
(S000003801)
GI:6322500 P37020
Kluyveromyces lactis (Kla) KLLA0E22605g GI:50309911
Eremothecium gossypii (Ego) AGOS_AEL071C GI:45190536
Magnaporthe grisea (Mgr) MGG_06104 GI:145603348
Neurospora crassa (Ncr) NCU06624.1 GI:32411997


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000324 fungal-type vacuole C
IDA
SceS000003801
GO:0005768 endosome C
IDA
SceS000003801
ISO
MmuMGI:99486
ISS
SpoSPBC19C7.11
GO:0005783 endoplasmic reticulum C
IDA
SceS000003801
GO:0005794 Golgi apparatus C
IDA
SceS000003801
ISS
SpoSPBC19C7.11
GO:0005797 Golgi medial cisterna C
IDA
SceS000003801
GO:0005886 plasma membrane C
IDA
SceS000003801
GO:0005887 integral to plasma membrane C
TAS
HsaCLCN5
GO:0016020 membrane C
IDA
HsaCLCN5
ISO
MmuMGI:99486
GO:0045177 apical part of cell C
IDA
HsaCLCN5
MmuMGI:99486
GO:0005247 voltage-gated chloride channel
activity
F
IDA
SceS000003801
ISO
MmuMGI:99486
ISS
SpoSPBC19C7.11
GO:0005254 chloride channel activity F
TAS
HsaCLCN5
GO:0006810 transport P
TAS
HsaCLCN5
GO:0006821 chloride transport P
IC
SpoSPBC19C7.11
ISO
MmuMGI:99486
GO:0006878 cellular copper ion homeostasis P
IMP
SceS000003801
GO:0006879 cellular iron ion homeostasis P
IMP
SceS000003801
GO:0006897 endocytosis P
IMP
MmuMGI:99486
GO:0007588 excretion P
TAS
HsaCLCN5
GO:0030003 cellular cation homeostasis P
ISS
SpoSPBC19C7.11
GO:0034765 regulation of ion transmembrane
transport
P
ISS
SpoSPBC19C7.11
GO:0044070 regulation of anion transport P
ISS
SpoSPBC19C7.11

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_780

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga1205 ENSANGP00000018663
Ashbya gossypii (Ago) ago2435 AEL071C
Ashbya gossypii (Ago) ago3931 AFR738C
Caenorhabditis elegans (Cel) cel1452 C07H4.2
(CE27360;
WBGene00000532)
Candida glabrata (Cgl) cgl2595 CAGL0I01628g
Cryptococcus neoformans (Cne) cne3182 167.m03523
Cryptococcus neoformans (Cne) cne3597 176.m02329
Debaryomyces hansenii (Dha) dha4305 DEHA0E24200g
Debaryomyces hansenii (Dha) dha4944 DEHA0F12617g
Drosophila melanogaster (Dme) dme9717 CG5284-PA
(FBgn0036566)
Drosophila melanogaster (Dme) dme9716 CG5284-PB
(FBgn0036566)
Danio rerio (Dre) dre13716 ENSDARP00000009998
(LOC562336)
Danio rerio (Dre) dre25589 ENSDARP00000030818
(LOC557584)
Takifugu rubripes (Fru) fru1510 SINFRUP00000135220
Takifugu rubripes (Fru) fru1509 SINFRUP00000135221
Takifugu rubripes (Fru) fru27755 SINFRUP00000163639
Takifugu rubripes (Fru) fru1511 SINFRUP00000167300
Takifugu rubripes (Fru) fru1508 SINFRUP00000176534
Gallus gallus (Gga) gga16945 ENSGALP00000011690
(CLCN5)
Gallus gallus (Gga) gga17274 ENSGALP00000015729
(CLCN3)
Gallus gallus (Gga) gga17275 ENSGALP00000015730
(CLCN3)
Gallus gallus (Gga) gga17276 ENSGALP00000015731
Gallus gallus (Gga) gga2448 ENSGALP00000026752
(CLCN4)
Homo sapiens (Hsa) hsa24847 ENSP00000261514
(CLCN3)
P51790-2
Homo sapiens (Hsa) hsa32426 ENSP00000262649
Homo sapiens (Hsa) hsa32784 ENSP00000304257
(CLCN5)
P51795
Homo sapiens (Hsa) hsa32783 ENSP00000343213
Homo sapiens (Hsa) hsa24846 ENSP00000353857
(CLCN3)
P51790-1
Kluyveromyces lactis (Kla) kla3968 KLLA0E22605g
Mus musculus (Mmu) mmu31108 ENSMUSP00000000619
(MGI:104571)
Q2TAX6
Mus musculus (Mmu) mmu28575 ENSMUSP00000004428
(MGI:99486)
Q9WVD4
Mus musculus (Mmu) mmu25997 ENSMUSP00000004430
(MGI:103555)
Q3TF45
Mus musculus (Mmu) mmu31109 ENSMUSP00000007436
(MGI:104571)
Q99JZ2
Mus musculus (Mmu) mmu25996 ENSMUSP00000058648
(MGI:103555)
Q8K4W8
Mus musculus (Mmu) mmu25998 ENSMUSP00000078396
Neurospora crassa (Ncr) ncr6263 NCU06444.2
Neurospora crassa (Ncr) ncr6442 NCU06624.2
Oryza sativa (Osa) osa15477 3036.m00115
Rattus norvegicus (Rno) rno31015 ENSRNOP00000003895
(RGD:2362)
P51796
Rattus norvegicus (Rno) rno31233 ENSRNOP00000004778
(RGD:708381)
Rattus norvegicus (Rno) rno12361 ENSRNOP00000014845
(RGD:621219)
Rattus norvegicus (Rno) rno12363 ENSRNOP00000014984
(RGD:621219)
Rattus norvegicus (Rno) rno12362 ENSRNOP00000045523
(RGD:621219)
P51792-1
Saccharomyces cerevisiae (Sce) sce3535 YJR040W
(S000003801)
Schizosaccharomyces pombe (Spo) spo1171 SPBC19C7.11 O60159
Yarrowia lipolytica (Yli) yli112 YALI0A02959g
Yarrowia lipolytica (Yli) yli2516 YALI0C20053g
Yarrowia lipolytica (Yli) yli4228 YALI0E09015g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000324 fungal-type vacuole C
IDA
SceS000003801
GO:0005622 intracellular C
ISO
MmuMGI:103555
GO:0005768 endosome C
IDA
SceS000003801
ISO
MmuMGI:99486
ISS
SpoSPBC19C7.11
GO:0005783 endoplasmic reticulum C
IDA
SceS000003801
GO:0005794 Golgi apparatus C
IDA
SceS000003801
ISS
SpoSPBC19C7.11
GO:0005797 Golgi medial cisterna C
IDA
SceS000003801
GO:0005886 plasma membrane C
IDA
SceS000003801
ISO
MmuMGI:103555
GO:0016020 membrane C
ISO
MmuMGI:99486
MGI:103555
GO:0016021 integral to membrane C
ISO
MmuMGI:103555
GO:0016324 apical plasma membrane C
ISO
MmuMGI:103555
GO:0045177 apical part of cell C
IDA
MmuMGI:99486
GO:0005216 ion channel activity F
ISO
MmuMGI:103555
GO:0005244 voltage-gated ion channel activity F
ISO
MmuMGI:103555
GO:0005247 voltage-gated chloride channel
activity
F
IDA
SceS000003801
ISO
MmuMGI:99486
MGI:103555
ISS
SpoSPBC19C7.11
GO:0005254 chloride channel activity F
ISO
MmuMGI:103555
ISS
DmeFBgn0036566
GO:0000003 reproduction P
IMP
CelWBGene00000532
GO:0006811 ion transport P
ISO
MmuMGI:103555
GO:0006821 chloride transport P
IC
SpoSPBC19C7.11
ISO
MmuMGI:99486
MGI:103555
GO:0006878 cellular copper ion homeostasis P
IMP
SceS000003801
GO:0006879 cellular iron ion homeostasis P
IMP
SceS000003801
GO:0006897 endocytosis P
IMP
MmuMGI:99486
GO:0030003 cellular cation homeostasis P
ISS
SpoSPBC19C7.11
GO:0034765 regulation of ion transmembrane
transport
P
ISS
SpoSPBC19C7.11
GO:0044070 regulation of anion transport P
ISS
SpoSPBC19C7.11

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC19C7.11
(O60159)
YJR040W
(S000003801)