Search term: YJR042W

Gene summary:

KOG results:

KOG name	Phylogenetic pattern (and link to KOGs with this pattern)
KOG2271	ACDHYP-

KOGs classification	KOGs description
CELLULAR PROCESSES AND SIGNALINGCELLULAR PROCESSES AND SIGNALING	Nuclear pore complex component (sc Nup85)

Species	KOG link	NCBI link	UniProt link
Arabidopsis thaliana (Ath)	At4g32910	GI:7452449
Caenorhabditis elegans (Cel)	CE06341 (WBGene00003788)	GI:17508241	Q22078
Drosophila melanogaster (Dme)	7302655	GI:7302655
Homo sapiens (Hsa)	Hs13376259 (NUP85)	GI:13376259	Q9BW27
Saccharomyces cerevisiae (Sce)	YJR042w (S000003803)	GI:6322502	P46673
Schizosaccharomyces pombe (Spo)	SPBC17G9.04c	GI:19112685	Q9UUE5

GO terms for KOG results:

GO ID	GO term	GO aspect	Evidence codes and associations
GO:0000776	kinetochore	C	IDA Hsa NUP85
GO:0005575	cellular_component	C	ND Ath At4g32910
GO:0005634	nucleus	C	IDA Spo SPBC17G9.04c
GO:0005635	nuclear envelope	C	EXP Hsa NUP85 IDA Spo SPBC17G9.04c
GO:0005643	nuclear pore	C	IDA Sce S000003803 Spo SPBC17G9.04c TAS Spo SPBC17G9.04c
GO:0005816	spindle pole body	C	IDA Spo SPBC17G9.04c
GO:0005829	cytosol	C	IDA Spo SPBC17G9.04c
GO:0031080	Nup107-160 complex	C	IDA Hsa NUP85 Sce S000003803 Spo SPBC17G9.04c NAS Hsa NUP85
GO:0031965	nuclear membrane	C	IDA Spo SPBC17G9.04c
GO:0005198	structural molecule activity	F	TAS Sce S000003803
GO:0005515	protein binding	F	IPI Hsa NUP85 Spo SPBC17G9.04c
GO:0000003	reproduction	P	IMP Cel WBGene00003788
GO:0000054	ribosomal subunit export from nucleus	P	RCA Sce S000003803
GO:0002119	nematode larval development	P	IMP Cel WBGene00003788
GO:0006406	mRNA export from nucleus	P	IMP Sce S000003803
GO:0006407	rRNA export from nucleus	P	ISS Spo SPBC17G9.04c TAS Sce S000003803
GO:0006408	snRNA export from nucleus	P	TAS Sce S000003803
GO:0006409	tRNA export from nucleus	P	TAS Sce S000003803
GO:0006607	NLS-bearing substrate import into nucleus	P	TAS Sce S000003803
GO:0006608	snRNP protein import into nucleus	P	TAS Sce S000003803
GO:0006609	mRNA-binding (hnRNP) protein import into nucleus	P	TAS Sce S000003803
GO:0006610	ribosomal protein import into nucleus	P	TAS Sce S000003803
GO:0006611	protein export from nucleus	P	TAS Sce S000003803
GO:0006913	nucleocytoplasmic transport	P	TAS Spo SPBC17G9.04c
GO:0006997	nucleus organization	P	IMP Cel WBGene00003788
GO:0006998	nuclear envelope organization	P	IMP Sce S000003803
GO:0006999	nuclear pore organization	P	TAS Sce S000003803
GO:0008150	biological_process	P	ND Ath At4g32910
GO:0008340	determination of adult lifespan	P	IMP Cel WBGene00003788
GO:0009792	embryo development ending in birth or egg hatching	P	IMP Cel WBGene00003788
GO:0018991	oviposition	P	IMP Cel WBGene00003788
GO:0040007	growth	P	IMP Cel WBGene00003788
GO:0040010	positive regulation of growth rate	P	IMP Cel WBGene00003788
GO:0040011	locomotion	P	IMP Cel WBGene00003788
GO:0040017	positive regulation of locomotion	P	IMP Cel WBGene00003788
GO:0040035	hermaphrodite genitalia development	P	IMP Cel WBGene00003788
GO:0045184	establishment of protein localization	P	RCA Sce S000003803

HomoloGene results:

HomoloGene cluster	Phylogenetic pattern
39449

Species	Gene ID	NCBI link	UniProt link
Saccharomyces cerevisiae (Sce)	NUP85 (S000003803)	GI:6322502	P46673
Kluyveromyces lactis (Kla)	KLLA0E22561g	GI:50309907
Eremothecium gossypii (Ego)	AGOS_AEL073C	GI:45190534

GO terms for Homologene results:

GO ID	GO term	GO aspect	Evidence codes and associations
GO:0005643	nuclear pore	C	IDA Sce S000003803
GO:0031080	Nup107-160 complex	C	IDA Sce S000003803
GO:0005198	structural molecule activity	F	TAS Sce S000003803
GO:0000054	ribosomal subunit export from nucleus	P	RCA Sce S000003803
GO:0006406	mRNA export from nucleus	P	IMP Sce S000003803
GO:0006407	rRNA export from nucleus	P	TAS Sce S000003803
GO:0006408	snRNA export from nucleus	P	TAS Sce S000003803
GO:0006409	tRNA export from nucleus	P	TAS Sce S000003803
GO:0006607	NLS-bearing substrate import into nucleus	P	TAS Sce S000003803
GO:0006608	snRNP protein import into nucleus	P	TAS Sce S000003803
GO:0006609	mRNA-binding (hnRNP) protein import into nucleus	P	TAS Sce S000003803
GO:0006610	ribosomal protein import into nucleus	P	TAS Sce S000003803
GO:0006611	protein export from nucleus	P	TAS Sce S000003803
GO:0006998	nuclear envelope organization	P	IMP Sce S000003803
GO:0006999	nuclear pore organization	P	TAS Sce S000003803
GO:0045184	establishment of protein localization	P	RCA Sce S000003803

OrthoMCL results:

OrthoMCL cluster	Phylogenetic pattern
OG1_20746

Species	OrthoMCL sequence	Model organism protein page	UniProt link
Ashbya gossypii (Ago)	ago2433	AEL073C
Candida glabrata (Cgl)	cgl2593	CAGL0I01584g
Debaryomyces hansenii (Dha)	dha4949	DEHA0F12705g
Kluyveromyces lactis (Kla)	kla3966	KLLA0E22561g
Saccharomyces cerevisiae (Sce)	sce3537	YJR042W (S000003803)
Yarrowia lipolytica (Yli)	yli6375	YALI0F24563g

GO terms for OrthoMCL results:

GO ID	GO term	GO aspect	Evidence codes and associations
GO:0005643	nuclear pore	C	IDA Sce S000003803
GO:0031080	Nup107-160 complex	C	IDA Sce S000003803
GO:0005198	structural molecule activity	F	TAS Sce S000003803
GO:0000054	ribosomal subunit export from nucleus	P	RCA Sce S000003803
GO:0006406	mRNA export from nucleus	P	IMP Sce S000003803
GO:0006407	rRNA export from nucleus	P	TAS Sce S000003803
GO:0006408	snRNA export from nucleus	P	TAS Sce S000003803
GO:0006409	tRNA export from nucleus	P	TAS Sce S000003803
GO:0006607	NLS-bearing substrate import into nucleus	P	TAS Sce S000003803
GO:0006608	snRNP protein import into nucleus	P	TAS Sce S000003803
GO:0006609	mRNA-binding (hnRNP) protein import into nucleus	P	TAS Sce S000003803
GO:0006610	ribosomal protein import into nucleus	P	TAS Sce S000003803
GO:0006611	protein export from nucleus	P	TAS Sce S000003803
GO:0006998	nuclear envelope organization	P	IMP Sce S000003803
GO:0006999	nuclear pore organization	P	TAS Sce S000003803
GO:0045184	establishment of protein localization	P	RCA Sce S000003803

Curated yeast ortholog results:

S. pombe systematic ID	S. cerevisiae systematic ID
SPBC17G9.04c (Q9UUE5)	YJR042W (S000003803)

GO terms for curated homolog results:

GO ID	GO term	GO aspect	Evidence codes and associations
GO:0005634	nucleus	C	IDA Spo SPBC17G9.04c
GO:0005635	nuclear envelope	C	IDA Spo SPBC17G9.04c
GO:0005643	nuclear pore	C	IDA Sce S000003803 Spo SPBC17G9.04c TAS Spo SPBC17G9.04c
GO:0005816	spindle pole body	C	IDA Spo SPBC17G9.04c
GO:0005829	cytosol	C	IDA Spo SPBC17G9.04c
GO:0031080	Nup107-160 complex	C	IDA Sce S000003803 Spo SPBC17G9.04c
GO:0031965	nuclear membrane	C	IDA Spo SPBC17G9.04c
GO:0005198	structural molecule activity	F	TAS Sce S000003803
GO:0005515	protein binding	F	IPI Spo SPBC17G9.04c
GO:0000054	ribosomal subunit export from nucleus	P	RCA Sce S000003803
GO:0006406	mRNA export from nucleus	P	IMP Sce S000003803
GO:0006407	rRNA export from nucleus	P	ISS Spo SPBC17G9.04c TAS Sce S000003803
GO:0006408	snRNA export from nucleus	P	TAS Sce S000003803
GO:0006409	tRNA export from nucleus	P	TAS Sce S000003803
GO:0006607	NLS-bearing substrate import into nucleus	P	TAS Sce S000003803
GO:0006608	snRNP protein import into nucleus	P	TAS Sce S000003803
GO:0006609	mRNA-binding (hnRNP) protein import into nucleus	P	TAS Sce S000003803
GO:0006610	ribosomal protein import into nucleus	P	TAS Sce S000003803
GO:0006611	protein export from nucleus	P	TAS Sce S000003803
GO:0006913	nucleocytoplasmic transport	P	TAS Spo SPBC17G9.04c
GO:0006998	nuclear envelope organization	P	IMP Sce S000003803
GO:0006999	nuclear pore organization	P	TAS Sce S000003803
GO:0045184	establishment of protein localization	P	RCA Sce S000003803