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KOG name | Phylogenetic pattern (and link to KOGs with this pattern) |
KOG1947 | ACDHYP-![]() |
KOGs classification | KOGs description |
POORLY CHARACTERIZED | Leucine rich repeat proteins, some proteins contain F-box |
HomoloGene cluster | Phylogenetic pattern |
39455 | ![]() |
Species | Gene ID | NCBI link | UniProt link |
Schizosaccharomyces pombe (Spo) | rhp7 (SPCC330.02) | GI:19075202 | O74999 |
Saccharomyces cerevisiae (Sce) | RAD7 (S000003813) | GI:6322512 | P06779 |
Kluyveromyces lactis (Kla) | KLLA0A07997g | GI:50302839 | |
Eremothecium gossypii (Ego) | AGOS_ACL088C | GI:45185600 | |
Magnaporthe grisea (Mgr) | MGG_07015 | GI:39978261 | |
Neurospora crassa (Ncr) | NCU03649.1 | GI:32404676 |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0000108 | repairosome | C |
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GO:0000109 | nucleotide-excision repair complex | C |
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GO:0000113 | nucleotide-excision repair factor 4 complex | C |
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GO:0005634 | nucleus | C |
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GO:0005816 | spindle pole body | C |
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GO:0031463 | Cul3-RING ubiquitin ligase complex | C |
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GO:0003684 | damaged DNA binding | F |
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GO:0004842 | ubiquitin-protein ligase activity | F |
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GO:0005515 | protein binding | F |
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GO:0008094 | DNA-dependent ATPase activity | F |
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GO:0000715 | nucleotide-excision repair, DNA damage recognition | P |
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GO:0006289 | nucleotide-excision repair | P |
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GO:0034644 | cellular response to UV | P |
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GO:0042787 | protein ubiquitination involved in ubiquitin-dependent protein catabolic process | P |
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OrthoMCL cluster | Phylogenetic pattern |
OG1_9327 | ![]() |
Species | OrthoMCL sequence | Model organism protein page | UniProt link |
Ashbya gossypii (Ago) | ago961 | ACL088C | |
Arabidopsis thaliana (Ath) | ath7991 | At2g06040.1 | |
Arabidopsis thaliana (Ath) | ath24414 | At5g21900.1 | |
Candida glabrata (Cgl) | cgl914 | CAGL0D06006g | |
Debaryomyces hansenii (Dha) | dha867 | DEHA0B04114g | |
Kluyveromyces lactis (Kla) | kla353 | KLLA0A07997g | |
Neurospora crassa (Ncr) | ncr3540 | NCU03649.2 | |
Oryza sativa (Osa) | osa26519 | 3938.m00160 | |
Saccharomyces cerevisiae (Sce) | sce3547 | YJR052W (S000003813) | |
Schizosaccharomyces pombe (Spo) | spo4352 | SPCC330.02 | O74999 |
Yarrowia lipolytica (Yli) | yli3592 | YALI0D21208g |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0000108 | repairosome | C |
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GO:0000109 | nucleotide-excision repair complex | C |
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GO:0000113 | nucleotide-excision repair factor 4 complex | C |
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GO:0005575 | cellular_component | C |
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GO:0005634 | nucleus | C |
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GO:0005816 | spindle pole body | C |
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GO:0031463 | Cul3-RING ubiquitin ligase complex | C |
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GO:0003674 | molecular_function | F |
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GO:0003684 | damaged DNA binding | F |
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GO:0004842 | ubiquitin-protein ligase activity | F |
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GO:0005515 | protein binding | F |
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GO:0008094 | DNA-dependent ATPase activity | F |
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GO:0000715 | nucleotide-excision repair, DNA damage recognition | P |
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GO:0006289 | nucleotide-excision repair | P |
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GO:0008150 | biological_process | P |
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GO:0034644 | cellular response to UV | P |
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GO:0042787 | protein ubiquitination involved in ubiquitin-dependent protein catabolic process | P |
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Curated yeast ortholog results:
S. pombe systematic ID | S. cerevisiae systematic ID |
SPCC330.02 (O74999) | YJR052W (S000003813) |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0000108 | repairosome | C |
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GO:0000109 | nucleotide-excision repair complex | C |
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GO:0000113 | nucleotide-excision repair factor 4 complex | C |
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GO:0005634 | nucleus | C |
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GO:0005816 | spindle pole body | C |
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GO:0031463 | Cul3-RING ubiquitin ligase complex | C |
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GO:0003684 | damaged DNA binding | F |
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GO:0004842 | ubiquitin-protein ligase activity | F |
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GO:0005515 | protein binding | F |
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GO:0008094 | DNA-dependent ATPase activity | F |
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GO:0000715 | nucleotide-excision repair, DNA damage recognition | P |
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GO:0006289 | nucleotide-excision repair | P |
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GO:0034644 | cellular response to UV | P |
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GO:0042787 | protein ubiquitination involved in ubiquitin-dependent protein catabolic process | P |
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s.khadayate@ucl.ac.uk |