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KOG name | Phylogenetic pattern (and link to KOGs with this pattern) |
KOG1049 | ACDHYPE |
KOGs classification | KOGs description |
INFORMATION STORAGE AND PROCESSING | Polyadenylation factor I complex, subunit FIP1 |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||||||
GO:0005575 | cellular_component | C |
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GO:0005634 | nucleus | C |
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GO:0005829 | cytosol | C |
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GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex | C |
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GO:0003674 | molecular_function | F |
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GO:0003723 | RNA binding | F |
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GO:0005515 | protein binding | F |
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GO:0006353 | transcription termination | P |
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GO:0006378 | mRNA polyadenylation | P |
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GO:0006379 | mRNA cleavage | P |
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GO:0008150 | biological_process | P |
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GO:0009792 | embryo development ending in birth or egg hatching | P |
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GO:0016074 | snoRNA metabolic process | P |
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GO:0031123 | RNA 3'-end processing | P |
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HomoloGene cluster | Phylogenetic pattern |
99764 |
Species | Gene ID | NCBI link | UniProt link |
Saccharomyces cerevisiae (Sce) | FIP1 (S000003853) | GI:6322552 | P45976 |
Kluyveromyces lactis (Kla) | KLLA0E05940g | GI:50308429 | |
Eremothecium gossypii (Ego) | AGOS_AGL307W | GI:45200790 |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex | C |
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GO:0003723 | RNA binding | F |
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GO:0005515 | protein binding | F |
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GO:0006353 | transcription termination | P |
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GO:0006378 | mRNA polyadenylation | P |
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GO:0006379 | mRNA cleavage | P |
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GO:0016074 | snoRNA metabolic process | P |
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GO:0031123 | RNA 3'-end processing | P |
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OrthoMCL cluster | Phylogenetic pattern |
OG1_3261 |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||||||
GO:0005634 | nucleus | C |
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GO:0005829 | cytosol | C |
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GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex | C |
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GO:0003674 | molecular_function | F |
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GO:0003723 | RNA binding | F |
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GO:0005515 | protein binding | F |
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GO:0006353 | transcription termination | P |
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GO:0006378 | mRNA polyadenylation | P |
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GO:0006379 | mRNA cleavage | P |
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GO:0006398 | histone mRNA 3'-end processing | P |
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GO:0009792 | embryo development ending in birth or egg hatching | P |
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GO:0016074 | snoRNA metabolic process | P |
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GO:0031123 | RNA 3'-end processing | P |
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Curated yeast ortholog results:
S. pombe systematic ID | S. cerevisiae systematic ID |
SPAC22G7.10 (Q09801) | YJR093C (S000003853) |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||||||
GO:0005634 | nucleus | C |
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GO:0005829 | cytosol | C |
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GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex | C |
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GO:0003674 | molecular_function | F |
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GO:0003723 | RNA binding | F |
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GO:0005515 | protein binding | F |
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GO:0006353 | transcription termination | P |
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GO:0006378 | mRNA polyadenylation | P |
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GO:0006379 | mRNA cleavage | P |
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GO:0016074 | snoRNA metabolic process | P |
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GO:0031123 | RNA 3'-end processing | P |
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