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Search term: YJR123W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPS5
SGD link S000003884
Alternative ID YJR123W
Description Protein component of the small (40S) ribosomal subunit, the least basic of the non-acidic ribosomal proteins; phosphorylated in vivo; essential for viability; has similarity to E. coli S7 and rat S5 ribosomal proteins
Synonyms YJR123W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3291 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Ribosomal protein S7

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g07696 GI:15226091
Arabidopsis thaliana (Ath) At2g37270 GI:15228111
Arabidopsis thaliana (Ath) At3g11940 GI:15229897
Arabidopsis thaliana (Ath) AtCh068 GI:7525079
Arabidopsis thaliana (Ath) AtCh082 GI:7525079
Arabidopsis thaliana (Ath) AtMi107 GI:13449397
Caenorhabditis elegans (Cel) CE06360
(WBGene00004474)		 GI:17542204 P49041
Caenorhabditis elegans (Cel) CE28870 GI:17543802
Drosophila melanogaster (Dme) 7293320
(FBgn0002590)		 GI:17647897
Drosophila melanogaster (Dme) 7297681
(FBgn0032236)		 GI:17647699
Drosophila melanogaster (Dme) 7299942 GI:7299942
Homo sapiens (Hsa) Hs13904870
(RPS5)		 GI:13904870 P46782
Homo sapiens (Hsa) Hs17450540 GI:17450540
Homo sapiens (Hsa) Hs17486793 GI:17486793
Homo sapiens (Hsa) Hs20542164 GI:20542164
Homo sapiens (Hsa) Hs22047601 GI:22047601
Homo sapiens (Hsa) Hs22058976 GI:22058976
Homo sapiens (Hsa) Hs7705738 GI:7705738
Saccharomyces cerevisiae (Sce) YJR113c
(S000003874)		 GI:6322574 P47150
Saccharomyces cerevisiae (Sce) YJR123w
(S000003884)		 GI:6322583 P26783
Schizosaccharomyces pombe (Spo) SPAC16E8.10c GI:19115134 O13744
Schizosaccharomyces pombe (Spo) SPAC328.10c GI:19115124 Q9P3T6
Schizosaccharomyces pombe (Spo) SPAC8C9.08 GI:19115191 O14277
Encephalitozoon cuniculi (Ecu) ECU04g0140 GI:19074092 Q8SS72


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt2g37270
At3g11940
GO:0005730 nucleolus C
IDA
SpoSPAC8C9.08
GO:0005739 mitochondrion C
IDA
SceS000003874
SpoSPAC16E8.10c
GO:0005763 mitochondrial small ribosomal subunit C
IPI
SceS000003874
ISS
DmeFBgn0032236
SpoSPAC16E8.10c
GO:0005773 vacuole C
IDA
AthAt3g11940
GO:0005829 cytosol C
EXP
HsaRPS5
IDA
SpoSPAC328.10c
SPAC8C9.08
GO:0005840 ribosome C
ISS
AthAt2g07696
At2g37270
At3g11940
NAS
DmeFBgn0002590
GO:0005886 plasma membrane C
IDA
AthAt3g11940
At2g37270
GO:0009507 chloroplast C
IDA
AthAt3g11940
At2g37270
GO:0016020 membrane C
IDA
AthAt2g37270
GO:0022626 cytosolic ribosome C
IDA
AthAt2g37270
At3g11940
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt2g37270
HsaRPS5
SceS000003884
ISS
AthAt2g37270
At3g11940
DmeFBgn0002590
FBgn0032236
SpoSPAC8C9.08
SPAC328.10c
NAS
DmeFBgn0002590
GO:0030529 ribonucleoprotein complex C
IDA
HsaRPS5
GO:0030686 90S preribosome C
IDA
SceS000003884
GO:0003723 RNA binding F
ISS
DmeFBgn0032236
NAS
HsaRPS5
GO:0003729 mRNA binding F
IDA
HsaRPS5
GO:0003735 structural constituent of ribosome F
IDA
HsaRPS5
SceS000003884
IPI
SceS000003874
ISS
AthAt3g11940
At2g37270
At2g07696
DmeFBgn0002590
FBgn0032236
SpoSPAC16E8.10c
SPAC328.10c
SPAC8C9.08
NAS
DmeFBgn0002590
GO:0016741 transferase activity, transferring one-carbon
groups		 F
RCA
SceS000003874
GO:0000003 reproduction P
IMP
CelWBGene00004474
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0002590
GO:0002119 nematode larval development P
IMP
CelWBGene00004474
GO:0006407 rRNA export from nucleus P
IMP
SceS000003884
GO:0006412 translation P
IC
HsaRPS5
SceS000003884
IGI
HsaRPS5
ISS
AthAt3g11940
At2g07696
At2g37270
DmeFBgn0002590
FBgn0032236
SpoSPAC16E8.10c
SPAC328.10c
SPAC8C9.08
NAS
DmeFBgn0002590
HsaRPS5
GO:0006413 translational initiation P
IC
HsaRPS5
GO:0006414 translational elongation P
EXP
HsaRPS5
GO:0006450 regulation of translational fidelity P
IGI
HsaRPS5
ISA
SceS000003884
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0002590
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004474
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004474
GO:0032543 mitochondrial translation P
IC
SceS000003874
NAS
SpoSPAC16E8.10c
GO:0040007 growth P
IMP
CelWBGene00004474
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC328.10c
SPAC8C9.08

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
783

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPS5 GI:13904870 P46782
Pan troglodytes (Ptr) RPS5 GI:114679429
Canis familiaris (Cfa) RPS5 GI:57036143
Mus musculus (Mmu) Rps5
(MGI:1097682)		 GI:6677807 P97461
Rattus norvegicus (Rno) Rps5
(RGD:3601)		 GI:109458180 41423
Drosophila melanogaster (Dme) RpS5b
(FBgn0038277)		 GI:21357837
Drosophila melanogaster (Dme) RpS5a
(FBgn0002590)		 GI:17647897
Anopheles gambiae (Aga) AgaP_AGAP008329 GI:57914573
Caenorhabditis elegans (Cel) rps-5
(CE06360;
WBGene00004474)		 GI:17542204 P49041
Schizosaccharomyces pombe (Spo) rps5-2
(SPAC328.10c)		 GI:19115124 Q9P3T6
Schizosaccharomyces pombe (Spo) rps5
(SPAC8C9.08)		 GI:19115191 O14277
Saccharomyces cerevisiae (Sce) RPS5
(S000003884)		 GI:6322583 P26783
Kluyveromyces lactis (Kla) KLLA0D10659g GI:50307115
Eremothecium gossypii (Ego) AGOS_ABR171W GI:45185402
Magnaporthe grisea (Mgr) MGG_06658 GI:145606100
Neurospora crassa (Ncr) NCU09475.1 GI:32418712
Arabidopsis thaliana (Ath) ATRPS5A GI:30681968
Arabidopsis thaliana (Ath) ATRPS5B GI:79324564
Oryza sativa (Osa) Os01g0100700 GI:115433960
Oryza sativa (Osa) Os11g0482000 GI:115485513
Plasmodium falciparum (Pfa) PF07_0088 GI:124511970


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthATRPS5B
ATRPS5A
GO:0005730 nucleolus C
IDA
SpoSPAC8C9.08
GO:0005773 vacuole C
IDA
AthATRPS5A
GO:0005811 lipid particle C
IDA
DmeFBgn0038277
GO:0005829 cytosol C
EXP
HsaRPS5
IDA
SpoSPAC328.10c
SPAC8C9.08
GO:0005840 ribosome C
ISS
AthATRPS5B
ATRPS5A
NAS
DmeFBgn0002590
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0038277
GO:0005886 plasma membrane C
IDA
AthATRPS5B
ATRPS5A
GO:0009507 chloroplast C
IDA
AthATRPS5B
ATRPS5A
GO:0016020 membrane C
IDA
AthATRPS5B
GO:0022626 cytosolic ribosome C
IDA
AthATRPS5B
ATRPS5A
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthATRPS5B
HsaRPS5
SceS000003884
ISO
MmuMGI:1097682
ISS
AthATRPS5B
ATRPS5A
DmeFBgn0002590
FBgn0038277
PfaPF07_0088
SpoSPAC8C9.08
SPAC328.10c
NAS
DmeFBgn0002590
GO:0030529 ribonucleoprotein complex C
IDA
HsaRPS5
ISO
MmuMGI:1097682
GO:0030686 90S preribosome C
IDA
SceS000003884
GO:0003723 RNA binding F
NAS
HsaRPS5
GO:0003729 mRNA binding F
IDA
HsaRPS5
GO:0003735 structural constituent of ribosome F
IDA
HsaRPS5
SceS000003884
ISS
AthATRPS5B
ATRPS5A
DmeFBgn0002590
FBgn0038277
SpoSPAC328.10c
SPAC8C9.08
NAS
DmeFBgn0002590
GO:0000003 reproduction P
IMP
CelWBGene00004474
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0002590
GO:0002119 nematode larval development P
IMP
CelWBGene00004474
GO:0006407 rRNA export from nucleus P
IMP
SceS000003884
GO:0006412 translation P
IC
HsaRPS5
SceS000003884
IGI
HsaRPS5
ISS
AthATRPS5A
ATRPS5B
DmeFBgn0038277
FBgn0002590
SpoSPAC328.10c
SPAC8C9.08
NAS
DmeFBgn0002590
HsaRPS5
GO:0006413 translational initiation P
IC
HsaRPS5
GO:0006414 translational elongation P
EXP
HsaRPS5
GO:0006450 regulation of translational fidelity P
IGI
HsaRPS5
ISA
SceS000003884
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0002590
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004474
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004474
GO:0040007 growth P
IMP
CelWBGene00004474
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC328.10c
SPAC8C9.08

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1125

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga10316 ENSANGP00000025326
Anopheles gambiae (Aga) aga10317 ENSANGP00000028274
Ashbya gossypii (Ago) ago764 ABR171W
Arabidopsis thaliana (Ath) ath10810 At2g37270.1
Arabidopsis thaliana (Ath) ath13322 At3g11940.1
Arabidopsis thaliana (Ath) ath13323 At3g11940.2
Caenorhabditis elegans (Cel) cel14637 T05E11.1
(CE06360;
WBGene00004474)
Candida glabrata (Cgl) cgl2083 CAGL0H00462g
Cryptococcus neoformans (Cne) cne3714 176.m02455
Dictyostelium discoideum (Ddi) ddi13231 DDB0230022
Debaryomyces hansenii (Dha) dha3705 DEHA0E10472g
Drosophila melanogaster (Dme) dme12654 CG7014-PA
(FBgn0038277)
Drosophila melanogaster (Dme) dme18301 CG8922-PA
(FBgn0002590)
Danio rerio (Dre) dre6736 ENSDARP00000009089
Encephalitozoon cuniculi (Ecu) ecu730 19074092
Takifugu rubripes (Fru) fru17701 SINFRUP00000159144
Homo sapiens (Hsa) hsa17294 ENSP00000196551
(RPS5)		 P46782
Kluyveromyces lactis (Kla) kla2535 KLLA0D10659g
Mus musculus (Mmu) mmu31015 ENSMUSP00000004554
(MGI:1097682)		 Q91V55
Neurospora crassa (Ncr) ncr9227 NCU09475.2
Oryza sativa (Osa) osa12069 2813.m00142
Oryza sativa (Osa) osa13680 2870.m00172
Oryza sativa (Osa) osa74343 7172.m00137
Plasmodium falciparum (Pfa) pfa2418 PF07_0088
Rattus norvegicus (Rno) rno1037 ENSRNOP00000026528
(RGD:3601)		 B0BN81
Saccharomyces cerevisiae (Sce) sce3619 YJR123W
(S000003884)
Schizosaccharomyces pombe (Spo) spo2084 SPAC328.10c Q9P3T6
Schizosaccharomyces pombe (Spo) spo615 SPAC8C9.08 O14277
Yarrowia lipolytica (Yli) yli5703 YALI0F08569g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt2g37270
At3g11940
GO:0005730 nucleolus C
IDA
SpoSPAC8C9.08
GO:0005773 vacuole C
IDA
AthAt3g11940
GO:0005811 lipid particle C
IDA
DmeFBgn0038277
GO:0005829 cytosol C
IDA
SpoSPAC328.10c
SPAC8C9.08
GO:0005840 ribosome C
ISS
AthAt2g37270
At3g11940
NAS
DmeFBgn0002590
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0038277
GO:0005886 plasma membrane C
IDA
AthAt3g11940
At2g37270
GO:0009507 chloroplast C
IDA
AthAt3g11940
At2g37270
GO:0016020 membrane C
IDA
AthAt2g37270
GO:0022626 cytosolic ribosome C
IDA
AthAt2g37270
At3g11940
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt2g37270
SceS000003884
ISO
MmuMGI:1097682
ISS
AthAt2g37270
At3g11940
DmeFBgn0002590
FBgn0038277
PfaPF07_0088
SpoSPAC8C9.08
SPAC328.10c
NAS
DmeFBgn0002590
GO:0030529 ribonucleoprotein complex C
ISO
MmuMGI:1097682
GO:0030686 90S preribosome C
IDA
SceS000003884
GO:0003735 structural constituent of ribosome F
IDA
SceS000003884
ISS
AthAt3g11940
At2g37270
DmeFBgn0002590
FBgn0038277
SpoSPAC328.10c
SPAC8C9.08
NAS
DmeFBgn0002590
GO:0000003 reproduction P
IMP
CelWBGene00004474
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0002590
GO:0002119 nematode larval development P
IMP
CelWBGene00004474
GO:0006407 rRNA export from nucleus P
IMP
SceS000003884
GO:0006412 translation P
IC
SceS000003884
ISS
AthAt3g11940
At2g37270
DmeFBgn0038277
FBgn0002590
SpoSPAC328.10c
SPAC8C9.08
NAS
DmeFBgn0002590
GO:0006450 regulation of translational fidelity P
ISA
SceS000003884
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0002590
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004474
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004474
GO:0040007 growth P
IMP
CelWBGene00004474
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC328.10c
SPAC8C9.08

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC328.10c
(Q9P3T6)		 YJR123W
(S000003884)
SPAC8C9.08
(O14277)		 YJR123W
(S000003884)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SpoSPAC8C9.08
GO:0005829 cytosol C
IDA
SpoSPAC328.10c
SPAC8C9.08
GO:0022627 cytosolic small ribosomal subunit C
IDA
SceS000003884
ISS
SpoSPAC8C9.08
SPAC328.10c
GO:0030686 90S preribosome C
IDA
SceS000003884
GO:0003735 structural constituent of ribosome F
IDA
SceS000003884
ISS
SpoSPAC328.10c
SPAC8C9.08
GO:0006407 rRNA export from nucleus P
IMP
SceS000003884
GO:0006412 translation P
IC
SceS000003884
ISS
SpoSPAC328.10c
SPAC8C9.08
GO:0006450 regulation of translational fidelity P
ISA
SceS000003884
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC328.10c
SPAC8C9.08

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s.khadayate@ucl.ac.uk