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Search term: YJR145C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPS4A
SGD link S000003906
Alternative ID YJR145C
Description Protein component of the small (40S) ribosomal subunit; mutation affects 20S pre-rRNA processing; identical to Rps4Bp and has similarity to rat S4 ribosomal protein
Synonyms YJR145C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0378 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 40S ribosomal protein S4

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g17360 GI:6598334
Arabidopsis thaliana (Ath) At5g07090 GI:9759565
Arabidopsis thaliana (Ath) At5g58420 GI:15237195
Caenorhabditis elegans (Cel) CE24278
(WBGene00004473)
GI:17543386 Q9N3X2
Drosophila melanogaster (Dme) 7294504 GI:7294504
Homo sapiens (Hsa) Hs17453883 GI:17453883
Homo sapiens (Hsa) Hs17457197 GI:17457197
Homo sapiens (Hsa) Hs17463421 GI:17463421
Homo sapiens (Hsa) Hs17467310 GI:17467310
Homo sapiens (Hsa) Hs17482433 GI:17482433
Homo sapiens (Hsa) Hs17483094 GI:17483094
Homo sapiens (Hsa) Hs17483096 GI:17483096
Homo sapiens (Hsa) Hs18559993 GI:18559993
Homo sapiens (Hsa) Hs20373177 GI:20373177
Homo sapiens (Hsa) Hs20471961 GI:20471961
Homo sapiens (Hsa) Hs20476822 GI:20476822
Homo sapiens (Hsa) Hs20547872 GI:20547872
Homo sapiens (Hsa) Hs20552301 GI:20552301
Homo sapiens (Hsa) Hs20558833 GI:20558833
Homo sapiens (Hsa) Hs20561785 GI:20561785
Homo sapiens (Hsa) Hs22058449 GI:22058449
Homo sapiens (Hsa) Hs22060500 GI:22060500
Homo sapiens (Hsa) Hs22061362 GI:22061362
Homo sapiens (Hsa) Hs22064349 GI:22064349
Homo sapiens (Hsa) Hs4506725
(RPS4X)
GI:4506725 P62701
Homo sapiens (Hsa) Hs4506727
(RPS4Y1)
GI:4506727 P22090
Saccharomyces cerevisiae (Sce) YHR203c
(S000001246)
GI:6321997 P05753
Saccharomyces cerevisiae (Sce) YJR145c
(S000003906)
GI:6321997 P05753
Schizosaccharomyces pombe (Spo) SPAC959.07 GI:19115086 Q9P4W9
Schizosaccharomyces pombe (Spo) SPBC19F8.08 GI:19113142 P87158
Schizosaccharomyces pombe (Spo) SPBC21B10.10 GI:19112469 Q9USW5
Encephalitozoon cuniculi (Ecu) ECU08g0870 GI:19173414 Q8SRB9
Arabidopsis thaliana (Ath) At2g17360 GI:6598334
Arabidopsis thaliana (Ath) At5g07090 GI:9759565
Arabidopsis thaliana (Ath) At5g58420 GI:15237195
Caenorhabditis elegans (Cel) CE24278
(WBGene00004473)
GI:17543386 Q9N3X2
Drosophila melanogaster (Dme) 7294504 GI:7294504
Homo sapiens (Hsa) Hs17453883 GI:17453883
Homo sapiens (Hsa) Hs17457197 GI:17457197
Homo sapiens (Hsa) Hs17463421 GI:17463421
Homo sapiens (Hsa) Hs17467310 GI:17467310
Homo sapiens (Hsa) Hs17482433 GI:17482433
Homo sapiens (Hsa) Hs17483094 GI:17483094
Homo sapiens (Hsa) Hs17483096 GI:17483096
Homo sapiens (Hsa) Hs18559993 GI:18559993
Homo sapiens (Hsa) Hs20373177 GI:20373177
Homo sapiens (Hsa) Hs20471961 GI:20471961
Homo sapiens (Hsa) Hs20476822 GI:20476822
Homo sapiens (Hsa) Hs20547872 GI:20547872
Homo sapiens (Hsa) Hs20552301 GI:20552301
Homo sapiens (Hsa) Hs20558833 GI:20558833
Homo sapiens (Hsa) Hs20561785 GI:20561785
Homo sapiens (Hsa) Hs22058449 GI:22058449
Homo sapiens (Hsa) Hs22060500 GI:22060500
Homo sapiens (Hsa) Hs22061362 GI:22061362
Homo sapiens (Hsa) Hs22064349 GI:22064349
Homo sapiens (Hsa) Hs4506725
(RPS4X)
GI:4506725 P62701
Homo sapiens (Hsa) Hs4506727
(RPS4Y1)
GI:4506727 P22090
Saccharomyces cerevisiae (Sce) YHR203c
(S000001246)
GI:6321997 P05753
Saccharomyces cerevisiae (Sce) YJR145c
(S000003906)
GI:6321997 P05753
Schizosaccharomyces pombe (Spo) SPAC959.07 GI:19115086 Q9P4W9
Schizosaccharomyces pombe (Spo) SPBC19F8.08 GI:19113142 P87158
Schizosaccharomyces pombe (Spo) SPBC21B10.10 GI:19112469 Q9USW5
Encephalitozoon cuniculi (Ecu) ECU08g0870 GI:19173414 Q8SRB9
Arabidopsis thaliana (Ath) At2g17360 GI:6598334
Arabidopsis thaliana (Ath) At5g07090 GI:9759565
Arabidopsis thaliana (Ath) At5g58420 GI:15237195
Caenorhabditis elegans (Cel) CE24278
(WBGene00004473)
GI:17543386 Q9N3X2
Drosophila melanogaster (Dme) 7294504 GI:7294504
Homo sapiens (Hsa) Hs17453883 GI:17453883
Homo sapiens (Hsa) Hs17457197 GI:17457197
Homo sapiens (Hsa) Hs17463421 GI:17463421
Homo sapiens (Hsa) Hs17467310 GI:17467310
Homo sapiens (Hsa) Hs17482433 GI:17482433
Homo sapiens (Hsa) Hs17483094 GI:17483094
Homo sapiens (Hsa) Hs17483096 GI:17483096
Homo sapiens (Hsa) Hs18559993 GI:18559993
Homo sapiens (Hsa) Hs20373177 GI:20373177
Homo sapiens (Hsa) Hs20471961 GI:20471961
Homo sapiens (Hsa) Hs20476822 GI:20476822
Homo sapiens (Hsa) Hs20547872 GI:20547872
Homo sapiens (Hsa) Hs20552301 GI:20552301
Homo sapiens (Hsa) Hs20558833 GI:20558833
Homo sapiens (Hsa) Hs20561785 GI:20561785
Homo sapiens (Hsa) Hs22058449 GI:22058449
Homo sapiens (Hsa) Hs22060500 GI:22060500
Homo sapiens (Hsa) Hs22061362 GI:22061362
Homo sapiens (Hsa) Hs22064349 GI:22064349
Homo sapiens (Hsa) Hs4506725
(RPS4X)
GI:4506725 P62701
Homo sapiens (Hsa) Hs4506727
(RPS4Y1)
GI:4506727 P22090
Saccharomyces cerevisiae (Sce) YHR203c
(S000001246)
GI:6321997 P05753
Saccharomyces cerevisiae (Sce) YJR145c
(S000003906)
GI:6321997 P05753
Schizosaccharomyces pombe (Spo) SPAC959.07 GI:19115086 Q9P4W9
Schizosaccharomyces pombe (Spo) SPBC19F8.08 GI:19113142 P87158
Schizosaccharomyces pombe (Spo) SPBC21B10.10 GI:19112469 Q9USW5
Encephalitozoon cuniculi (Ecu) ECU08g0870 GI:19173414 Q8SRB9


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
AthAt5g58420
SpoSPBC21B10.10
GO:0005737 cytoplasm C
IDA
SceS000003906
GO:0005829 cytosol C
EXP
HsaRPS4Y1
RPS4X
IDA
SpoSPAC959.07
SPBC19F8.08
SPBC21B10.10
GO:0005840 ribosome C
IDA
HsaRPS4X
GO:0005844 polysome C
IDA
HsaRPS4X
RPS4Y1
GO:0005886 plasma membrane C
IDA
AthAt5g07090
At2g17360
GO:0009507 chloroplast C
IDA
AthAt2g17360
GO:0015935 small ribosomal subunit C
IDA
HsaRPS4X
GO:0016020 membrane C
IDA
AthAt5g58420
GO:0022626 cytosolic ribosome C
IDA
AthAt5g58420
At5g07090
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt5g58420
At2g17360
HsaRPS4X
SceS000001246
S000003906
ISS
AthAt5g58420
At5g07090
At2g17360
SpoSPBC21B10.10
SPAC959.07
SPBC19F8.08
NAS
HsaRPS4X
RPS4Y1
GO:0030529 ribonucleoprotein complex C
IDA
HsaRPS4X
GO:0030686 90S preribosome C
IDA
SceS000003906
S000001246
GO:0003723 RNA binding F
TAS
HsaRPS4Y1
GO:0003735 structural constituent of ribosome F
IDA
SceS000001246
S000003906
IMP
HsaRPS4X
RPS4Y1
ISS
AthAt5g58420
At5g07090
At2g17360
SpoSPBC19F8.08
SPAC959.07
SPBC21B10.10
GO:0005515 protein binding F
IPI
AthAt5g07090
GO:0006412 translation P
IC
HsaRPS4X
SceS000003906
S000001246
IMP
HsaRPS4X
RPS4Y1
ISS
AthAt2g17360
At5g58420
At5g07090
SpoSPAC959.07
SPBC19F8.08
SPBC21B10.10
GO:0006414 translational elongation P
EXP
HsaRPS4Y1
RPS4X
GO:0006417 regulation of translation P
RCA
SceS000003906
S000001246
GO:0007275 multicellular organismal development P
IMP
HsaRPS4X
RPS4Y1
GO:0008284 positive regulation of cell proliferation P
IMP
HsaRPS4X
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004473
GO:0045727 positive regulation of translation P
IMP
HsaRPS4X

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
90857

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPS4X GI:4506725 P62701
Pan troglodytes (Ptr) RPS4X GI:114689109
Canis familiaris (Cfa) RPS4Y2 GI:57090063
Mus musculus (Mmu) Rps4x
(MGI:98158)
GI:6677805 P62702
Rattus norvegicus (Rno) Rps4x
(RGD:3600)
GI:56090273
Gallus gallus (Gga) RPS4X GI:46048780
Drosophila melanogaster (Dme) RpS4
(FBgn0011284)
GI:24663672
Anopheles gambiae (Aga) AgaP_AGAP006871 GI:158286707
Caenorhabditis elegans (Cel) rps-4
(CE24278;
WBGene00004473)
GI:17543386 Q9N3X2
Schizosaccharomyces pombe (Spo) rps4 GI:19115086
Schizosaccharomyces pombe (Spo) rps4 GI:19113142
Schizosaccharomyces pombe (Spo) rps4-2
(SPBC21B10.10)
GI:19112469 Q9USW5
Saccharomyces cerevisiae (Sce) RPS4B
(S000001246)
GI:6321997 P05753
Saccharomyces cerevisiae (Sce) RPS4A
(S000003906)
GI:6322605
Kluyveromyces lactis (Kla) KLLA0B03652g GI:50303511
Eremothecium gossypii (Ego) AGOS_ADL391C GI:45187482
Magnaporthe grisea (Mgr) MGG_02747 GI:145610060
Neurospora crassa (Ncr) NCU02181.1 GI:32417786
Arabidopsis thaliana (Ath) AT5G58420 GI:15237195
Arabidopsis thaliana (Ath) AT5G07090 GI:18415395
Arabidopsis thaliana (Ath) AT2G17360 GI:18398393
Oryza sativa (Osa) Os01g0358400 GI:115436514
Oryza sativa (Osa) Os05g0368300 GI:115463485
Oryza sativa (Osa) Os02g0105900 GI:115443689
Plasmodium falciparum (Pfa) PF11_0065 GI:124803509


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
AthAt5g58420
SpoSPBC21B10.10
GO:0005737 cytoplasm C
IDA
SceS000003906
GO:0005811 lipid particle C
IDA
DmeFBgn0011284
GO:0005829 cytosol C
EXP
HsaRPS4X
IDA
SpoSPBC21B10.10
GO:0005840 ribosome C
IDA
HsaRPS4X
NAS
DmeFBgn0011284
GO:0005844 polysome C
IDA
HsaRPS4X
GO:0005886 plasma membrane C
IDA
AthAt5g07090
At2g17360
GO:0009507 chloroplast C
IDA
AthAt2g17360
GO:0015935 small ribosomal subunit C
IDA
HsaRPS4X
ISA
MmuMGI:98158
ISS
PfaPF11_0065
GO:0016020 membrane C
IDA
AthAt5g58420
GO:0022626 cytosolic ribosome C
IDA
AthAt5g58420
At5g07090
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt5g58420
At2g17360
HsaRPS4X
SceS000001246
S000003906
ISS
AthAt5g58420
At5g07090
At2g17360
DmeFBgn0011284
SpoSPBC21B10.10
NAS
DmeFBgn0011284
HsaRPS4X
GO:0030529 ribonucleoprotein complex C
IDA
HsaRPS4X
GO:0030686 90S preribosome C
IDA
SceS000003906
S000001246
GO:0003674 molecular_function F
ND
MmuMGI:98158
GO:0003735 structural constituent of ribosome F
IDA
SceS000001246
S000003906
IMP
HsaRPS4X
ISS
AthAt5g58420
At5g07090
At2g17360
DmeFBgn0011284
SpoSPBC21B10.10
NAS
DmeFBgn0011284
GO:0005515 protein binding F
IPI
AthAt5g07090
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0011284
GO:0006412 translation P
IC
HsaRPS4X
SceS000003906
S000001246
IMP
HsaRPS4X
ISS
AthAt2g17360
At5g58420
At5g07090
DmeFBgn0011284
SpoSPBC21B10.10
NAS
DmeFBgn0011284
GO:0006414 translational elongation P
EXP
HsaRPS4X
GO:0006417 regulation of translation P
RCA
SceS000003906
S000001246
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0011284
GO:0007275 multicellular organismal development P
IMP
HsaRPS4X
GO:0008150 biological_process P
ND
MmuMGI:98158
GO:0008284 positive regulation of cell proliferation P
IMP
HsaRPS4X
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004473
GO:0045727 positive regulation of translation P
IMP
HsaRPS4X

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_706

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga2326 ENSANGP00000013302
Ashbya gossypii (Ago) ago1350 ADL391C
Arabidopsis thaliana (Ath) ath8580 At2g17360.1
Arabidopsis thaliana (Ath) ath22916 At5g07090.1
Arabidopsis thaliana (Ath) ath27893 At5g58420.1
Caenorhabditis elegans (Cel) cel18782 Y43B11AR.4
(CE24278;
WBGene00004473)
Candida glabrata (Cgl) cgl1618 CAGL0F09031g
Cryptococcus neoformans (Cne) cne2595 181.m08807
Dictyostelium discoideum (Ddi) ddi11806 DDB0185063
Debaryomyces hansenii (Dha) dha4551 DEHA0F03674g
Debaryomyces hansenii (Dha) dha6059 DEHA0G08041g
Drosophila melanogaster (Dme) dme9338 CG11276-PA
(FBgn0011284)
Drosophila melanogaster (Dme) dme9339 CG11276-PB
(FBgn0011284)
Danio rerio (Dre) dre10958 ENSDARP00000014931
(rps4x)
Q642H9
Encephalitozoon cuniculi (Ecu) ecu245 19173414
Takifugu rubripes (Fru) fru25892 SINFRUP00000128667
Gallus gallus (Gga) gga16708 ENSGALP00000007705
(RPS4X)
P47836
Homo sapiens (Hsa) hsa33731 ENSP00000250784
(RPS4Y1)
P22090
Homo sapiens (Hsa) hsa33816 ENSP00000288666
(RPS4Y2)
Q8TD47
Homo sapiens (Hsa) hsa32981 ENSP00000352322
Kluyveromyces lactis (Kla) kla695 KLLA0B03652g
Mus musculus (Mmu) mmu29388 ENSMUSP00000033683
(MGI:98158)
P62702
Neurospora crassa (Ncr) ncr2123 NCU02181.2
Oryza sativa (Osa) osa10573 2780.m00168
Oryza sativa (Osa) osa17720 3316.m00202
Oryza sativa (Osa) osa28692 4254.m00120
Plasmodium falciparum (Pfa) pfa1015 PF11_0065
Rattus norvegicus (Rno) rno31725 ENSRNOP00000004278
(RGD:3600)
P62703
Rattus norvegicus (Rno) rno20839 ENSRNOP00000043988
(RGD:3600)
P62703
Rattus norvegicus (Rno) rno22552 ENSRNOP00000049546
(RGD:1590988)
Saccharomyces cerevisiae (Sce) sce2981 YHR203C
(S000001246)
Saccharomyces cerevisiae (Sce) sce3643 YJR145C
(S000003906)
Schizosaccharomyces pombe (Spo) spo324 SPAC959.07 Q9P4W9
Schizosaccharomyces pombe (Spo) spo4730 SPBC19F8.08 P87158
Schizosaccharomyces pombe (Spo) spo4467 SPBC21B10.10 Q9USW5
Yarrowia lipolytica (Yli) yli3250 YALI0D12903g