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Search term: YKL014C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name URB1
SGD link S000001497
Alternative ID YKL014C
Description Nucleolar protein required for the normal accumulation of 25S and 5.8S rRNAs, associated with the 27SA2 pre-ribosomal particle; proposed to be involved in the biogenesis of the 60S ribosomal subunit
Synonyms YKL014C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1791 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At4g27010 GI:15236945
Caenorhabditis elegans (Cel) CE27439
(WBGene00020273)		 GI:17563936 O16515
Drosophila melanogaster (Dme) 7300855 GI:7300855
Homo sapiens (Hsa) Hs20560911 GI:20560911
Saccharomyces cerevisiae (Sce) YKL014c
(S000001497)		 GI:6322838 P34241
Schizosaccharomyces pombe (Spo) SPCC14G10.02 GI:19075443 O74415


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt4g27010
GO:0005634 nucleus C
IDA
SpoSPCC14G10.02
GO:0005730 nucleolus C
IDA
SceS000001497
ISS
SpoSPCC14G10.02
GO:0005829 cytosol C
IDA
SpoSPCC14G10.02
GO:0003674 molecular_function F
ND
SceS000001497
SpoSPCC14G10.02
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001497
GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001497
GO:0008150 biological_process P
ND
AthAt4g27010
GO:0042254 ribosome biogenesis P
ISS
SpoSPCC14G10.02
GO:0042255 ribosome assembly P
RCA
SceS000001497

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39578

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPCC14G10.02 GI:63054423 O74415
Saccharomyces cerevisiae (Sce) URB1
(S000001497)		 GI:6322838 P34241
Kluyveromyces lactis (Kla) KLLA0E18216g GI:50309519
Eremothecium gossypii (Ego) AGOS_ACL095C GI:45185593


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC14G10.02
GO:0005730 nucleolus C
IDA
SceS000001497
ISS
SpoSPCC14G10.02
GO:0005829 cytosol C
IDA
SpoSPCC14G10.02
GO:0003674 molecular_function F
ND
SceS000001497
SpoSPCC14G10.02
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001497
GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001497
GO:0042254 ribosome biogenesis P
ISS
SpoSPCC14G10.02
GO:0042255 ribosome assembly P
RCA
SceS000001497

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_13132

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago954 ACL095C
Candida glabrata (Cgl) cgl4496 CAGL0L09669g
Debaryomyces hansenii (Dha) dha5590 DEHA0F26950g
Gallus gallus (Gga) gga3856 ENSGALP00000007250
Kluyveromyces lactis (Kla) kla3768 KLLA0E18216g
Neurospora crassa (Ncr) ncr7484 NCU07686.2
Saccharomyces cerevisiae (Sce) sce3676 YKL014C
(S000001497)
Schizosaccharomyces pombe (Spo) spo4681 SPCC14G10.02 O74415
Yarrowia lipolytica (Yli) yli1018 YALI0B06875g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC14G10.02
GO:0005730 nucleolus C
IDA
SceS000001497
ISS
SpoSPCC14G10.02
GO:0005829 cytosol C
IDA
SpoSPCC14G10.02
GO:0003674 molecular_function F
ND
SceS000001497
SpoSPCC14G10.02
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001497
GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001497
GO:0042254 ribosome biogenesis P
ISS
SpoSPCC14G10.02
GO:0042255 ribosome assembly P
RCA
SceS000001497

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC14G10.02
(O74415)		 YKL014C
(S000001497)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC14G10.02
GO:0005730 nucleolus C
IDA
SceS000001497
ISS
SpoSPCC14G10.02
GO:0005829 cytosol C
IDA
SpoSPCC14G10.02
GO:0003674 molecular_function F
ND
SceS000001497
SpoSPCC14G10.02
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001497
GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001497
GO:0042254 ribosome biogenesis P
ISS
SpoSPCC14G10.02
GO:0042255 ribosome assembly P
RCA
SceS000001497

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