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Search term: YKL057C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NUP120
SGD link S000001540
Alternative ID YKL057C
Description Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), required for even distribution of NPCs around the nuclear envelope, involved in establishment of a normal nucleocytoplasmic concentration gradient of the GTPase Gsp1p
Synonyms YKL057C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39557

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) NUP120
(S000001540)		 GI:6322793
Kluyveromyces lactis (Kla) KLLA0C12771g GI:50305617
Eremothecium gossypii (Ego) AGOS_ABR073C GI:45185302


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005643 nuclear pore C
IDA
SceS000001540
GO:0031080 Nup107-160 complex C
IDA
SceS000001540
GO:0005198 structural molecule activity F
TAS
SceS000001540
GO:0006406 mRNA export from nucleus P
IMP
SceS000001540
GO:0006407 rRNA export from nucleus P
TAS
SceS000001540
GO:0006408 snRNA export from nucleus P
TAS
SceS000001540
GO:0006409 tRNA export from nucleus P
TAS
SceS000001540
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000001540
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000001540
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000001540
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000001540
GO:0006611 protein export from nucleus P
TAS
SceS000001540
GO:0006999 nuclear pore organization P
IMP
SceS000001540
GO:0050000 chromosome localization P
IMP
SceS000001540

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_17553

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago664 ABR073C
Candida glabrata (Cgl) cgl2755 CAGL0I05412g
Debaryomyces hansenii (Dha) dha5831 DEHA0G03036g
Kluyveromyces lactis (Kla) kla1768 KLLA0C12771g
Saccharomyces cerevisiae (Sce) sce3722 YKL057C
(S000001540)
Schizosaccharomyces pombe (Spo) spo1707 SPBC3B9.16c O43044
Yarrowia lipolytica (Yli) yli3051 YALI0D08294g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005635 nuclear envelope C
IDA
SpoSPBC3B9.16c
GO:0005643 nuclear pore C
IDA
SceS000001540
SpoSPBC3B9.16c
TAS
SpoSPBC3B9.16c
GO:0031080 Nup107-160 complex C
IDA
SceS000001540
SpoSPBC3B9.16c
GO:0031965 nuclear membrane C
IDA
SpoSPBC3B9.16c
GO:0005198 structural molecule activity F
TAS
SceS000001540
GO:0005515 protein binding F
IPI
SpoSPBC3B9.16c
GO:0006406 mRNA export from nucleus P
IMP
SceS000001540
GO:0006407 rRNA export from nucleus P
TAS
SceS000001540
GO:0006408 snRNA export from nucleus P
TAS
SceS000001540
GO:0006409 tRNA export from nucleus P
TAS
SceS000001540
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000001540
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000001540
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000001540
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000001540
GO:0006611 protein export from nucleus P
TAS
SceS000001540
GO:0006913 nucleocytoplasmic transport P
TAS
SpoSPBC3B9.16c
GO:0006999 nuclear pore organization P
IMP
SceS000001540
GO:0007059 chromosome segregation P
IMP
SpoSPBC3B9.16c
GO:0016973 poly(A)+ mRNA export from nucleus P
IMP
SpoSPBC3B9.16c
GO:0031081 nuclear pore distribution P
IMP
SpoSPBC3B9.16c
GO:0050000 chromosome localization P
IMP
SceS000001540
GO:0051301 cell division P
IMP
SpoSPBC3B9.16c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC3B9.16c
(O43044)		 YKL057C
(S000001540)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005635 nuclear envelope C
IDA
SpoSPBC3B9.16c
GO:0005643 nuclear pore C
IDA
SceS000001540
SpoSPBC3B9.16c
TAS
SpoSPBC3B9.16c
GO:0031080 Nup107-160 complex C
IDA
SceS000001540
SpoSPBC3B9.16c
GO:0031965 nuclear membrane C
IDA
SpoSPBC3B9.16c
GO:0005198 structural molecule activity F
TAS
SceS000001540
GO:0005515 protein binding F
IPI
SpoSPBC3B9.16c
GO:0006406 mRNA export from nucleus P
IMP
SceS000001540
GO:0006407 rRNA export from nucleus P
TAS
SceS000001540
GO:0006408 snRNA export from nucleus P
TAS
SceS000001540
GO:0006409 tRNA export from nucleus P
TAS
SceS000001540
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000001540
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000001540
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000001540
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000001540
GO:0006611 protein export from nucleus P
TAS
SceS000001540
GO:0006913 nucleocytoplasmic transport P
TAS
SpoSPBC3B9.16c
GO:0006999 nuclear pore organization P
IMP
SceS000001540
GO:0007059 chromosome segregation P
IMP
SpoSPBC3B9.16c
GO:0016973 poly(A)+ mRNA export from nucleus P
IMP
SpoSPBC3B9.16c
GO:0031081 nuclear pore distribution P
IMP
SpoSPBC3B9.16c
GO:0050000 chromosome localization P
IMP
SceS000001540
GO:0051301 cell division P
IMP
SpoSPBC3B9.16c

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GO info in one table:

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