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Search term: YKL059C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name MPE1
SGD link S000001542
Alternative ID YKL059C
Description Essential conserved subunit of CPF (cleavage and polyadenylation factor), plays a role in 3' end formation of mRNA via the specific cleavage and polyadenylation of pre-mRNA, contains a putative RNA-binding zinc knuckle motif
Synonyms YKL059C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0314 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Predicted E3 ubiquitin ligase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At4g17410 GI:15236068
Arabidopsis thaliana (Ath) At5g47430 GI:15238091
Caenorhabditis elegans (Cel) CE28930_1 GI:17507217
Drosophila melanogaster (Dme) 7291741_1
(snama)		 GI:19922884 Q9XZ21
Homo sapiens (Hsa) Hs14249148 GI:14249148
Homo sapiens (Hsa) Hs22068920 GI:22068920
Homo sapiens (Hsa) Hs5902044 GI:5902044
Saccharomyces cerevisiae (Sce) YKL059c
(S000001542)		 GI:6322791 P35728
Schizosaccharomyces pombe (Spo) SPBP8B7.15c GI:19113314 O94264
Encephalitozoon cuniculi (Ecu) ECU09g0340 GI:19173154
Arabidopsis thaliana (Ath) At4g17410 GI:15236068
Arabidopsis thaliana (Ath) At5g47430 GI:15238091
Caenorhabditis elegans (Cel) CE28930_1 GI:17507217
Drosophila melanogaster (Dme) 7291741_1
(snama)		 GI:19922884 Q9XZ21
Homo sapiens (Hsa) Hs14249148 GI:14249148
Homo sapiens (Hsa) Hs22068920 GI:22068920
Homo sapiens (Hsa) Hs5902044 GI:5902044
Saccharomyces cerevisiae (Sce) YKL059c
(S000001542)		 GI:6322791 P35728
Schizosaccharomyces pombe (Spo) SPBP8B7.15c GI:19113314 O94264
Encephalitozoon cuniculi (Ecu) ECU09g0340 GI:19173154
Arabidopsis thaliana (Ath) At4g17410 GI:15236068
Arabidopsis thaliana (Ath) At5g47430 GI:15238091
Caenorhabditis elegans (Cel) CE28930_1 GI:17507217
Drosophila melanogaster (Dme) 7291741_1
(snama)		 GI:19922884 Q9XZ21
Homo sapiens (Hsa) Hs14249148 GI:14249148
Homo sapiens (Hsa) Hs22068920 GI:22068920
Homo sapiens (Hsa) Hs5902044 GI:5902044
Saccharomyces cerevisiae (Sce) YKL059c
(S000001542)		 GI:6322791 P35728
Schizosaccharomyces pombe (Spo) SPBP8B7.15c GI:19113314 O94264
Encephalitozoon cuniculi (Ecu) ECU09g0340 GI:19173154


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBP8B7.15c
GO:0005847 mRNA cleavage and polyadenylation specificity
factor complex		 C
IPI
SceS000001542
ISS
SpoSPBP8B7.15c
GO:0003723 RNA binding F
IC
SceS000001542
GO:0005515 protein binding F
ISS
Dmesnama
GO:0006353 transcription termination P
RCA
SceS000001542
GO:0006378 mRNA polyadenylation P
IDA
SceS000001542
IGI
SceS000001542
IMP
SceS000001542
IPI
SceS000001542
ISS
SpoSPBP8B7.15c
GO:0006379 mRNA cleavage P
IDA
SceS000001542
IGI
SceS000001542
IMP
SceS000001542
IPI
SceS000001542
ISS
SpoSPBP8B7.15c
GO:0008150 biological_process P
ND
AthAt5g47430
At4g17410
GO:0016567 protein ubiquitination P
NAS
SpoSPBP8B7.15c
GO:0031123 RNA 3'-end processing P
RCA
SceS000001542

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117858

Species Gene ID NCBI link UniProt link
Drosophila melanogaster (Dme) snama GI:19922884 Q9XZ21
Anopheles gambiae (Aga) AgaP_AGAP011217 GI:158287379
Caenorhabditis elegans (Cel) tag-214
(CE34550;
WBGene00009477)		 GI:86561178
Schizosaccharomyces pombe (Spo) SPBP8B7.15c GI:19113314 O94264
Saccharomyces cerevisiae (Sce) MPE1
(S000001542)		 GI:6322791 P35728
Kluyveromyces lactis (Kla) KLLA0C12837g GI:50305623
Eremothecium gossypii (Ego) AGOS_ABR070C GI:45185299
Magnaporthe grisea (Mgr) MGG_09536 GI:39961502
Neurospora crassa (Ncr) NCU06718.1 GI:32413048


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBP8B7.15c
GO:0005847 mRNA cleavage and polyadenylation specificity
factor complex		 C
IPI
SceS000001542
ISS
SpoSPBP8B7.15c
GO:0003723 RNA binding F
IC
SceS000001542
GO:0005515 protein binding F
ISS
Dmesnama
GO:0001703 gastrulation with mouth forming
first		 P
IMP
CelWBGene00009477
GO:0006353 transcription termination P
RCA
SceS000001542
GO:0006378 mRNA polyadenylation P
IDA
SceS000001542
IGI
SceS000001542
IMP
SceS000001542
IPI
SceS000001542
ISS
SpoSPBP8B7.15c
GO:0006379 mRNA cleavage P
IDA
SceS000001542
IGI
SceS000001542
IMP
SceS000001542
IPI
SceS000001542
ISS
SpoSPBP8B7.15c
GO:0007369 gastrulation P
IMP
CelWBGene00009477
GO:0009790 embryo development P
IMP
CelWBGene00009477
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00009477
GO:0016567 protein ubiquitination P
NAS
SpoSPBP8B7.15c
GO:0031123 RNA 3'-end processing P
RCA
SceS000001542

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1037

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga8271 ENSANGP00000011171
Ashbya gossypii (Ago) ago661 ABR070C
Arabidopsis thaliana (Ath) ath19598 At4g17410.1
Arabidopsis thaliana (Ath) ath26616 At5g47430.1
Caenorhabditis elegans (Cel) cel8292 F36F2.3
Candida glabrata (Cgl) cgl2757 CAGL0I05456g
Cryptococcus neoformans (Cne) cne568 163.m06283
Dictyostelium discoideum (Ddi) ddi4322 DDB0215292
Debaryomyces hansenii (Dha) dha5832 DEHA0G03058g
Drosophila melanogaster (Dme) dme6951 CG3231-PA
(FBgn0027522)
Danio rerio (Dre) dre19261 ENSDARP00000028000
Danio rerio (Dre) dre19263 ENSDARP00000048629
Danio rerio (Dre) dre19262 ENSDARP00000050014
Encephalitozoon cuniculi (Ecu) ecu1305 19173154
Takifugu rubripes (Fru) fru11583 SINFRUP00000138327
Takifugu rubripes (Fru) fru11584 SINFRUP00000138329
Takifugu rubripes (Fru) fru11585 SINFRUP00000138331
Takifugu rubripes (Fru) fru2529 SINFRUP00000143637
Takifugu rubripes (Fru) fru2530 SINFRUP00000143640
Takifugu rubripes (Fru) fru2531 SINFRUP00000174995
Gallus gallus (Gga) gga6619 ENSGALP00000009718
Gallus gallus (Gga) gga6620 ENSGALP00000009719
Gallus gallus (Gga) gga6621 ENSGALP00000009720
(RBBP6)
Gallus gallus (Gga) gga6622 ENSGALP00000009721
Gallus gallus (Gga) gga6623 ENSGALP00000009722
Homo sapiens (Hsa) hsa11836 ENSP00000241754
Homo sapiens (Hsa) hsa11835 ENSP00000316291
(RBBP6)		 Q7Z6E9-2
Homo sapiens (Hsa) hsa11834 ENSP00000317872
(RBBP6)		 Q7Z6E9-1
Homo sapiens (Hsa) hsa11837 ENSP00000333998
Kluyveromyces lactis (Kla) kla1771 KLLA0C12837g
Mus musculus (Mmu) mmu25040 ENSMUSP00000049528
(MGI:894835)		 P97868-1
Mus musculus (Mmu) mmu25038 ENSMUSP00000058513
Mus musculus (Mmu) mmu25039 ENSMUSP00000071519
(MGI:894835)		 P97868-2
Mus musculus (Mmu) mmu24063 ENSMUSP00000073396
Mus musculus (Mmu) mmu24064 ENSMUSP00000078633
Neurospora crassa (Ncr) ncr6534 NCU06718.2
Oryza sativa (Osa) osa36454 4840.m00174
Rattus norvegicus (Rno) rno2930 ENSRNOP00000016644
Rattus norvegicus (Rno) rno2932 ENSRNOP00000036139
(RGD:1311964)
Rattus norvegicus (Rno) rno2931 ENSRNOP00000045663
(RGD:1311964)		 Q5EB85
Saccharomyces cerevisiae (Sce) sce3724 YKL059C
(S000001542)
Schizosaccharomyces pombe (Spo) spo3826 SPBP8B7.15c O94264
Yarrowia lipolytica (Yli) yli326 YALI0A09834g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:894835
GO:0005634 nucleus C
IDA
SpoSPBP8B7.15c
GO:0005847 mRNA cleavage and polyadenylation specificity
factor complex		 C
IPI
SceS000001542
ISS
SpoSPBP8B7.15c
GO:0003674 molecular_function F
ND
MmuMGI:894835
GO:0003723 RNA binding F
IC
SceS000001542
GO:0006353 transcription termination P
RCA
SceS000001542
GO:0006378 mRNA polyadenylation P
IDA
SceS000001542
IGI
SceS000001542
IMP
SceS000001542
IPI
SceS000001542
ISS
SpoSPBP8B7.15c
GO:0006379 mRNA cleavage P
IDA
SceS000001542
IGI
SceS000001542
IMP
SceS000001542
IPI
SceS000001542
ISS
SpoSPBP8B7.15c
GO:0008150 biological_process P
ND
AthAt5g47430
At4g17410
MmuMGI:894835
GO:0016567 protein ubiquitination P
NAS
SpoSPBP8B7.15c
GO:0031123 RNA 3'-end processing P
RCA
SceS000001542

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBP8B7.15c
(O94264)		 YKL059C
(S000001542)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBP8B7.15c
GO:0005847 mRNA cleavage and polyadenylation specificity
factor complex		 C
IPI
SceS000001542
ISS
SpoSPBP8B7.15c
GO:0003723 RNA binding F
IC
SceS000001542
GO:0006353 transcription termination P
RCA
SceS000001542
GO:0006378 mRNA polyadenylation P
IDA
SceS000001542
IGI
SceS000001542
IMP
SceS000001542
IPI
SceS000001542
ISS
SpoSPBP8B7.15c
GO:0006379 mRNA cleavage P
IDA
SceS000001542
IGI
SceS000001542
IMP
SceS000001542
IPI
SceS000001542
ISS
SpoSPBP8B7.15c
GO:0016567 protein ubiquitination P
NAS
SpoSPBP8B7.15c
GO:0031123 RNA 3'-end processing P
RCA
SceS000001542

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

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