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Search term: YKL141W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SDH3
SGD link S000001624
Alternative ID YKL141W
Description Cytochrome b subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxidation of succinate to the transfer of electrons to ubiquinone
Synonyms YKL141W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0449 ACDHYP-

KOGs classification KOGs description
METABOLISM Succinate dehydrogenase, cytochrome b subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At4g32210_3 GI:15236709
Arabidopsis thaliana (Ath) At5g09600_2 GI:15242460
Caenorhabditis elegans (Cel) CE00598
(WBGene00003225)		 GI:17554318 P41956
Drosophila melanogaster (Dme) 7299395 GI:7299395
Drosophila melanogaster (Dme) 7299412 GI:7299412
Homo sapiens (Hsa) Hs4506863
(SDHC)		 GI:4506863 Q99643
Homo sapiens (Hsa) Hs18552304 GI:18552304
Saccharomyces cerevisiae (Sce) YKL141w
(S000001624)		 GI:6322708 P33421
Saccharomyces cerevisiae (Sce) YMR118c GI:6323765 Q04487
Schizosaccharomyces pombe (Spo) SPCC330.12c GI:19075212 O74882
Arabidopsis thaliana (Ath) At4g32210_3 GI:15236709
Arabidopsis thaliana (Ath) At5g09600_2 GI:15242460
Caenorhabditis elegans (Cel) CE00598
(WBGene00003225)		 GI:17554318 P41956
Drosophila melanogaster (Dme) 7299395 GI:7299395
Drosophila melanogaster (Dme) 7299412 GI:7299412
Homo sapiens (Hsa) Hs4506863
(SDHC)		 GI:4506863 Q99643
Homo sapiens (Hsa) Hs18552304 GI:18552304
Saccharomyces cerevisiae (Sce) YKL141w
(S000001624)		 GI:6322708 P33421
Saccharomyces cerevisiae (Sce) YMR118c GI:6323765 Q04487
Schizosaccharomyces pombe (Spo) SPCC330.12c GI:19075212 O74882
Arabidopsis thaliana (Ath) At4g32210_3 GI:15236709
Arabidopsis thaliana (Ath) At5g09600_2 GI:15242460
Caenorhabditis elegans (Cel) CE00598
(WBGene00003225)		 GI:17554318 P41956
Drosophila melanogaster (Dme) 7299395 GI:7299395
Drosophila melanogaster (Dme) 7299412 GI:7299412
Homo sapiens (Hsa) Hs4506863
(SDHC)		 GI:4506863 Q99643
Homo sapiens (Hsa) Hs18552304 GI:18552304
Saccharomyces cerevisiae (Sce) YKL141w
(S000001624)		 GI:6322708 P33421
Saccharomyces cerevisiae (Sce) YMR118c GI:6323765 Q04487
Schizosaccharomyces pombe (Spo) SPCC330.12c GI:19075212 O74882


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceYMR118c
GO:0005739 mitochondrion C
IDA
AthAt4g32210
At5g09600
SceS000001624
SpoSPCC330.12c
TAS
HsaSDHC
GO:0005743 mitochondrial inner membrane C
EXP
HsaSDHC
ISS
HsaSDHC
GO:0005749 mitochondrial respiratory chain complex
II		 C
IDA
SceS000001624
ISS
AthAt5g09600
At4g32210
HsaSDHC
SpoSPCC330.12c
GO:0016020 membrane C
ISS
AthAt4g32210
At5g09600
GO:0016021 integral to membrane C
TAS
HsaSDHC
GO:0045273 respiratory chain complex II C
TAS
HsaSDHC
GO:0000104 succinate dehydrogenase activity F
TAS
AthAt5g09600
At4g32210
GO:0003674 molecular_function F
ND
SceYMR118c
GO:0008177 succinate dehydrogenase (ubiquinone)
activity		 F
IGI
SceS000001624
ISS
SpoSPCC330.12c
GO:0020037 heme binding F
ISS
HsaSDHC
GO:0000003 reproduction P
IMP
CelWBGene00003225
GO:0006099 tricarboxylic acid cycle P
TAS
HsaSDHC
SceS000001624
GO:0006105 succinate metabolic process P
IC
SpoSPCC330.12c
GO:0006121 mitochondrial electron transport, succinate to
ubiquinone		 P
IMP
CelWBGene00003225
ISS
SpoSPCC330.12c
TAS
AthAt4g32210
At5g09600
SceS000001624
GO:0006793 phosphorus metabolic process P
RCA
SceS000001624
GO:0006811 ion transport P
RCA
SceS000001624
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00003225
GO:0008150 biological_process P
ND
SceYMR118c
GO:0009060 aerobic respiration P
TAS
HsaSDHC
GO:0009117 nucleotide metabolic process P
RCA
SceS000001624
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00003225
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00003225
GO:0045333 cellular respiration P
IMP
SceS000001624
GO:0055114 oxidation reduction P
RCA
SceS000001624
TAS
HsaSDHC

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39527

Species Gene ID NCBI link UniProt link
Caenorhabditis elegans (Cel) mev-1
(CE00598;
WBGene00003225)		 GI:17554318 P41956
Schizosaccharomyces pombe (Spo) sdh3
(SPCC330.12c)		 GI:19075212 O74882
Saccharomyces cerevisiae (Sce) SDH3
(S000001624)		 GI:6322708 P33421
Kluyveromyces lactis (Kla) KLLA0E12155g GI:50308981
Eremothecium gossypii (Ego) AGOS_AFR207C GI:45198725
Magnaporthe grisea (Mgr) MGG_04876 GI:39940728
Neurospora crassa (Ncr) NCU07756.1 GI:32415968


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000001624
SpoSPCC330.12c
GO:0005749 mitochondrial respiratory chain complex
II		 C
IDA
SceS000001624
ISS
SpoSPCC330.12c
GO:0008177 succinate dehydrogenase (ubiquinone)
activity		 F
IGI
SceS000001624
ISS
SpoSPCC330.12c
GO:0000003 reproduction P
IMP
CelWBGene00003225
GO:0006099 tricarboxylic acid cycle P
TAS
SceS000001624
GO:0006105 succinate metabolic process P
IC
SpoSPCC330.12c
GO:0006121 mitochondrial electron transport, succinate to
ubiquinone		 P
IMP
CelWBGene00003225
ISS
SpoSPCC330.12c
TAS
SceS000001624
GO:0006793 phosphorus metabolic process P
RCA
SceS000001624
GO:0006811 ion transport P
RCA
SceS000001624
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00003225
GO:0009117 nucleotide metabolic process P
RCA
SceS000001624
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00003225
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00003225
GO:0045333 cellular respiration P
IMP
SceS000001624
GO:0055114 oxidation reduction P
RCA
SceS000001624

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3560

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga7630 ENSANGP00000017418
Ashbya gossypii (Ago) ago3399 AFR207C
Arabidopsis thaliana (Ath) ath23153 At5g09600.1
Caenorhabditis elegans (Cel) cel14855 T07C4.7
(CE00598;
WBGene00003225)
Candida glabrata (Cgl) cgl744 CAGL0D01958g
Cryptococcus neoformans (Cne) cne2116 181.m08761
Dictyostelium discoideum (Ddi) ddi11683 DDB0231385
Debaryomyces hansenii (Dha) dha880 DEHA0B04389g
Drosophila melanogaster (Dme) dme11996 CG6666-PA
(FBgn0037873)
Escherichia coli (Eco) eco699 16128696
Takifugu rubripes (Fru) fru19766 SINFRUP00000140905
Takifugu rubripes (Fru) fru4330 SINFRUP00000165873
Homo sapiens (Hsa) hsa2473 ENSP00000271481
Kluyveromyces lactis (Kla) kla3495 KLLA0E12155g
Mus musculus (Mmu) mmu1462 ENSMUSP00000080273
(MGI:1913302)
Neurospora crassa (Ncr) ncr7552 NCU07756.2
Rattus norvegicus (Rno) rno9506 ENSRNOP00000004228
(RGD:1359454)		 Q641Z9
Saccharomyces cerevisiae (Sce) sce3812 YKL141W
(S000001624)
Saccharomyces cerevisiae (Sce) sce4873 YMR118C
Schizosaccharomyces pombe (Spo) spo1143 SPCC330.12c O74882
Yarrowia lipolytica (Yli) yli5089 YALI0E29667g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceYMR118c
GO:0005739 mitochondrion C
IDA
AthAt5g09600
MmuMGI:1913302
SceS000001624
SpoSPCC330.12c
GO:0005749 mitochondrial respiratory chain complex
II		 C
IDA
SceS000001624
ISS
AthAt5g09600
DmeFBgn0037873
SpoSPCC330.12c
GO:0016020 membrane C
ISS
AthAt5g09600
GO:0000104 succinate dehydrogenase activity F
ISS
DmeFBgn0037873
TAS
AthAt5g09600
GO:0003674 molecular_function F
ND
SceYMR118c
GO:0008177 succinate dehydrogenase (ubiquinone)
activity		 F
IGI
SceS000001624
ISS
DmeFBgn0037873
SpoSPCC330.12c
GO:0000003 reproduction P
IMP
CelWBGene00003225
GO:0006099 tricarboxylic acid cycle P
ISS
DmeFBgn0037873
TAS
SceS000001624
GO:0006105 succinate metabolic process P
IC
SpoSPCC330.12c
ISS
DmeFBgn0037873
GO:0006121 mitochondrial electron transport, succinate to
ubiquinone		 P
IMP
CelWBGene00003225
DmeFBgn0037873
ISS
DmeFBgn0037873
SpoSPCC330.12c
TAS
AthAt5g09600
SceS000001624
GO:0006793 phosphorus metabolic process P
RCA
SceS000001624
GO:0006811 ion transport P
RCA
SceS000001624
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00003225
GO:0006979 response to oxidative stress P
IMP
DmeFBgn0037873
GO:0008150 biological_process P
ND
SceYMR118c
GO:0008340 determination of adult lifespan P
IMP
DmeFBgn0037873
GO:0009117 nucleotide metabolic process P
RCA
SceS000001624
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00003225
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00003225
GO:0045333 cellular respiration P
IMP
SceS000001624
GO:0055114 oxidation reduction P
RCA
SceS000001624

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC330.12c
(O74882)		 YKL141W
(S000001624)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000001624
SpoSPCC330.12c
GO:0005749 mitochondrial respiratory chain complex
II		 C
IDA
SceS000001624
ISS
SpoSPCC330.12c
GO:0008177 succinate dehydrogenase (ubiquinone)
activity		 F
IGI
SceS000001624
ISS
SpoSPCC330.12c
GO:0006099 tricarboxylic acid cycle P
TAS
SceS000001624
GO:0006105 succinate metabolic process P
IC
SpoSPCC330.12c
GO:0006121 mitochondrial electron transport, succinate to
ubiquinone		 P
ISS
SpoSPCC330.12c
TAS
SceS000001624
GO:0006793 phosphorus metabolic process P
RCA
SceS000001624
GO:0006811 ion transport P
RCA
SceS000001624
GO:0009117 nucleotide metabolic process P
RCA
SceS000001624
GO:0045333 cellular respiration P
IMP
SceS000001624
GO:0055114 oxidation reduction P
RCA
SceS000001624

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