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Search term: YKL143W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name LTV1
SGD link S000001626
Alternative ID YKL143W
Description Component of the GSE complex, which is required for proper sorting of amino acid permease Gap1p; required for ribosomal small subunit export from nucleus; required for growth at low temperature
Synonyms YKL143W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2637 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g49990 GI:15229649
Caenorhabditis elegans (Cel) CE14052
(WBGene00011944)		 GI:17509195 O02327
Drosophila melanogaster (Dme) 7303692
(FBgn0027525)		 GI:19921998
Homo sapiens (Hsa) Hs21361875 GI:14602664 Q96GA3
Homo sapiens (Hsa) HsM14249594 GI:14249594
Saccharomyces cerevisiae (Sce) YKL143w
(S000001626)		 GI:6322706 P34078
Schizosaccharomyces pombe (Spo) SPAC3F10.17 GI:19114861 Q10191


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g49990
DmeFBgn0027525
GO:0005634 nucleus C
IDA
SceS000001626
SpoSPAC3F10.17
GO:0005737 cytoplasm C
IDA
SceS000001626
GO:0005829 cytosol C
IDA
SpoSPAC3F10.17
GO:0030688 preribosome, small subunit precursor C
IDA
SceS000001626
ISS
SpoSPAC3F10.17
GO:0031902 late endosome membrane C
IDA
SceS000001626
GO:0034449 GSE complex C
IDA
SceS000001626
GO:0003674 molecular_function F
ND
AthAt3g49990
DmeFBgn0027525
SceS000001626
SpoSPAC3F10.17
GO:0000003 reproduction P
IMP
CelWBGene00011944
GO:0000056 ribosomal small subunit export from
nucleus		 P
IGI
SceS000001626
IMP
SceS000001626
ISS
SpoSPAC3F10.17
GO:0002119 nematode larval development P
IMP
CelWBGene00011944
GO:0006970 response to osmotic stress P
IMP
SceS000001626
GO:0008150 biological_process P
ND
AthAt3g49990
DmeFBgn0027525
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00011944
GO:0016246 RNA interference P
IMP
CelWBGene00011944
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000001626
GO:0040007 growth P
IMP
CelWBGene00011944
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00011944
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00011944
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC3F10.17
GO:0042274 ribosomal small subunit biogenesis P
IMP
SceS000001626
RCA
SceS000001626

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117854

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC3F10.17 GI:19114861 Q10191
Saccharomyces cerevisiae (Sce) LTV1
(S000001626)		 GI:6322706 P34078
Kluyveromyces lactis (Kla) KLLA0E13761g GI:50309127
Eremothecium gossypii (Ego) AGOS_ACR048C GI:45185735
Magnaporthe grisea (Mgr) MGG_07524 GI:39972445
Neurospora crassa (Ncr) NCU04165.1 GI:32405784


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001626
SpoSPAC3F10.17
GO:0005737 cytoplasm C
IDA
SceS000001626
GO:0005829 cytosol C
IDA
SpoSPAC3F10.17
GO:0030688 preribosome, small subunit precursor C
IDA
SceS000001626
ISS
SpoSPAC3F10.17
GO:0031902 late endosome membrane C
IDA
SceS000001626
GO:0034449 GSE complex C
IDA
SceS000001626
GO:0003674 molecular_function F
ND
SceS000001626
SpoSPAC3F10.17
GO:0000056 ribosomal small subunit export from
nucleus		 P
IGI
SceS000001626
IMP
SceS000001626
ISS
SpoSPAC3F10.17
GO:0006970 response to osmotic stress P
IMP
SceS000001626
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000001626
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC3F10.17
GO:0042274 ribosomal small subunit biogenesis P
IMP
SceS000001626
RCA
SceS000001626

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3956

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga7535 ENSANGP00000016262
Ashbya gossypii (Ago) ago1096 ACR048C
Arabidopsis thaliana (Ath) ath16312 At3g49990.1
Caenorhabditis elegans (Cel) cel16112 T23D8.3
(CE14052;
WBGene00011944)
Candida glabrata (Cgl) cgl3032 CAGL0J00891g
Cryptococcus neoformans (Cne) cne4362 177.m03115
Dictyostelium discoideum (Ddi) ddi1597 DDB0167326
Debaryomyces hansenii (Dha) dha631 DEHA0A14102g
Drosophila melanogaster (Dme) dme4391 CG7686-PA
(FBgn0027525)
Danio rerio (Dre) dre28234 ENSDARP00000017491
(ltv1)		 Q6DRP7
Takifugu rubripes (Fru) fru25833 SINFRUP00000159498
Gallus gallus (Gga) gga15348 ENSGALP00000022318
(LTV1)
Gallus gallus (Gga) gga15349 ENSGALP00000022319
Homo sapiens (Hsa) hsa27859 ENSP00000304233
Kluyveromyces lactis (Kla) kla3568 KLLA0E13761g
Mus musculus (Mmu) mmu1849 ENSMUSP00000019950
(MGI:2447810)		 Q6NSQ7
Neurospora crassa (Ncr) ncr4041 NCU04165.2
Oryza sativa (Osa) osa63107 6686.m00190
Oryza sativa (Osa) osa64237 6701.m00161
Rattus norvegicus (Rno) rno157 ENSRNOP00000020453
(RGD:1311264)		 Q68FR7
Saccharomyces cerevisiae (Sce) sce3814 YKL143W
(S000001626)
Schizosaccharomyces pombe (Spo) spo1963 SPAC3F10.17 Q10191
Yarrowia lipolytica (Yli) yli4207 YALI0E08448g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g49990
DmeFBgn0027525
GO:0005634 nucleus C
IDA
SceS000001626
SpoSPAC3F10.17
GO:0005737 cytoplasm C
IDA
SceS000001626
GO:0005829 cytosol C
IDA
SpoSPAC3F10.17
GO:0030688 preribosome, small subunit precursor C
IDA
SceS000001626
ISS
SpoSPAC3F10.17
GO:0031902 late endosome membrane C
IDA
SceS000001626
GO:0034449 GSE complex C
IDA
SceS000001626
GO:0003674 molecular_function F
ND
AthAt3g49990
DmeFBgn0027525
SceS000001626
SpoSPAC3F10.17
GO:0000003 reproduction P
IMP
CelWBGene00011944
GO:0000056 ribosomal small subunit export from
nucleus		 P
IGI
SceS000001626
IMP
SceS000001626
ISS
SpoSPAC3F10.17
GO:0002119 nematode larval development P
IMP
CelWBGene00011944
GO:0006970 response to osmotic stress P
IMP
SceS000001626
GO:0008150 biological_process P
ND
AthAt3g49990
DmeFBgn0027525
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00011944
GO:0016246 RNA interference P
IMP
CelWBGene00011944
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000001626
GO:0040007 growth P
IMP
CelWBGene00011944
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00011944
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00011944
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC3F10.17
GO:0042274 ribosomal small subunit biogenesis P
IMP
SceS000001626
RCA
SceS000001626

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC3F10.17
(Q10191)		 YKL143W
(S000001626)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001626
SpoSPAC3F10.17
GO:0005737 cytoplasm C
IDA
SceS000001626
GO:0005829 cytosol C
IDA
SpoSPAC3F10.17
GO:0030688 preribosome, small subunit precursor C
IDA
SceS000001626
ISS
SpoSPAC3F10.17
GO:0031902 late endosome membrane C
IDA
SceS000001626
GO:0034449 GSE complex C
IDA
SceS000001626
GO:0003674 molecular_function F
ND
SceS000001626
SpoSPAC3F10.17
GO:0000056 ribosomal small subunit export from
nucleus		 P
IGI
SceS000001626
IMP
SceS000001626
ISS
SpoSPAC3F10.17
GO:0006970 response to osmotic stress P
IMP
SceS000001626
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000001626
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC3F10.17
GO:0042274 ribosomal small subunit biogenesis P
IMP
SceS000001626
RCA
SceS000001626

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GO info in one table:

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