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Search term: YKL160W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ELF1
SGD link S000001643
Alternative ID YKL160W
Description Transcription elongation factor that contains a conserved zinc finger domain; implicated in the maintenance of proper chromatin structure in actively transcribed regions; deletion inhibits Brome mosaic virus (BMV) gene expression
Synonyms YKL160W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3214 ACDHYPE

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized Zn ribbon-containing protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g46030 GI:9757723
Caenorhabditis elegans (Cel) CE22483
(WBGene00013219)		 GI:17537567 Q9XVZ8
Drosophila melanogaster (Dme) 7294231 GI:7294231
Homo sapiens (Hsa) Hs14150203
(ELOF1)		 GI:14150203 P60002
Saccharomyces cerevisiae (Sce) YKL160w
(S000001643)		 GI:6322689 P36053
Schizosaccharomyces pombe (Spo) SPAC1B3.02c GI:19115698 O13868
Encephalitozoon cuniculi (Ecu) ECU09g0850 GI:19173207


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g46030
GO:0005634 nucleus C
IDA
SceS000001643
SpoSPAC1B3.02c
ISS
SpoSPAC1B3.02c
GO:0003674 molecular_function F
ND
AthAt5g46030
GO:0008270 zinc ion binding F
ISS
SpoSPAC1B3.02c
GO:0016944 RNA polymerase II transcription elongation factor
activity		 F
IGI
SceS000001643
IMP
SceS000001643
ISS
SpoSPAC1B3.02c
GO:0006325 chromatin organization P
IGI
SceS000001643
IMP
SceS000001643
ISS
SpoSPAC1B3.02c
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IGI
SceS000001643
IMP
SceS000001643
ISS
SpoSPAC1B3.02c
GO:0008150 biological_process P
ND
AthAt5g46030
GO:0032784 regulation of RNA elongation P
ISS
SpoSPAC1B3.02c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
41862

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) ELOF1 GI:14150203 P60002
Pan troglodytes (Ptr) ELOF1 GI:114675502
Mus musculus (Mmu) Elof1
(MGI:1913376)		 GI:25140989 P60003
Rattus norvegicus (Rno) Elof1 GI:109483184
Drosophila melanogaster (Dme) CG40228 GI:161076122
Anopheles gambiae (Aga) AgaP_AGAP003707 GI:31209067
Caenorhabditis elegans (Cel) Y54G11A.11
(CE22483;
WBGene00013219)		 GI:17537567 Q9XVZ8
Schizosaccharomyces pombe (Spo) SPAC1B3.02c GI:19115698 O13868
Saccharomyces cerevisiae (Sce) ELF1
(S000001643)		 GI:6322689 P36053
Kluyveromyces lactis (Kla) KLLA0F21868g GI:50312049
Eremothecium gossypii (Ego) AGOS_AER237W GI:45190840
Magnaporthe grisea (Mgr) MGG_06916 GI:39978063
Neurospora crassa (Ncr) NCU01447.1 GI:32414813
Arabidopsis thaliana (Ath) AT5G46030 GI:18422622
Oryza sativa (Osa) Os02g0134300 GI:115444063
Oryza sativa (Osa) Os07g0631100 GI:115473523


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g46030
DmeCG40228
MmuMGI:1913376
GO:0005634 nucleus C
IDA
SceS000001643
SpoSPAC1B3.02c
ISS
SpoSPAC1B3.02c
GO:0003674 molecular_function F
ND
AthAt5g46030
DmeCG40228
MmuMGI:1913376
GO:0008270 zinc ion binding F
ISS
SpoSPAC1B3.02c
GO:0016944 RNA polymerase II transcription elongation factor
activity		 F
IGI
SceS000001643
IMP
SceS000001643
ISS
SpoSPAC1B3.02c
GO:0006325 chromatin organization P
IGI
SceS000001643
IMP
SceS000001643
ISS
SpoSPAC1B3.02c
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IGI
SceS000001643
IMP
SceS000001643
ISS
SpoSPAC1B3.02c
GO:0008150 biological_process P
ND
AthAt5g46030
DmeCG40228
MmuMGI:1913376
GO:0032784 regulation of RNA elongation P
ISS
SpoSPAC1B3.02c

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1705

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga6180 ENSANGP00000023899
Ashbya gossypii (Ago) ago2739 AER237W
Arabidopsis thaliana (Ath) ath26460 At5g46030.1
Caenorhabditis elegans (Cel) cel19784 Y54G11A.11
(CE22483;
WBGene00013219)
Candida glabrata (Cgl) cgl1215 CAGL0E06270g
Cryptococcus neoformans (Cne) cne4924 186.m03832
Dictyostelium discoideum (Ddi) ddi7751 DDB0218902
Debaryomyces hansenii (Dha) dha4149 DEHA0E20471g
Drosophila melanogaster (Dme) dme19003 CG40228-PA
Drosophila melanogaster (Dme) dme9661 CG6244-PA
(FBgn0036531)
Danio rerio (Dre) dre26851 ENSDARP00000033227
Encephalitozoon cuniculi (Ecu) ecu1358 19173207
Takifugu rubripes (Fru) fru2107 SINFRUP00000161665
Homo sapiens (Hsa) hsa15674 ENSP00000252445
(ELOF1)		 P60002
Kluyveromyces lactis (Kla) kla5056 KLLA0F21868g
Mus musculus (Mmu) mmu27197 ENSMUSP00000013966
(MGI:1913376)		 P60003
Mus musculus (Mmu) mmu12958 ENSMUSP00000071549
Mus musculus (Mmu) mmu31383 ENSMUSP00000071566
Mus musculus (Mmu) mmu12959 ENSMUSP00000074879
Mus musculus (Mmu) mmu12956 ENSMUSP00000077234
Mus musculus (Mmu) mmu31385 ENSMUSP00000078217
Mus musculus (Mmu) mmu12960 ENSMUSP00000078812
Mus musculus (Mmu) mmu12955 ENSMUSP00000078976
Mus musculus (Mmu) mmu31384 ENSMUSP00000079360
Mus musculus (Mmu) mmu12957 ENSMUSP00000079516
Neurospora crassa (Ncr) ncr1403 NCU01447.2
Oryza sativa (Osa) osa78191 7372.m00127
Plasmodium falciparum (Pfa) pfa4610 PFI0715w
Rattus norvegicus (Rno) rno28143 ENSRNOP00000019140
(RGD:1587399)
Saccharomyces cerevisiae (Sce) sce3832 YKL160W
(S000001643)
Schizosaccharomyces pombe (Spo) spo4650 SPAC1B3.02c O13868
Yarrowia lipolytica (Yli) yli4279 YALI0E10131g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g46030
DmeFBgn0036531
MmuMGI:1913376
GO:0005634 nucleus C
IDA
SceS000001643
SpoSPAC1B3.02c
ISS
SpoSPAC1B3.02c
GO:0003674 molecular_function F
ND
AthAt5g46030
DmeFBgn0036531
MmuMGI:1913376
GO:0008270 zinc ion binding F
ISS
SpoSPAC1B3.02c
GO:0016944 RNA polymerase II transcription elongation factor
activity		 F
IGI
SceS000001643
IMP
SceS000001643
ISS
SpoSPAC1B3.02c
GO:0006325 chromatin organization P
IGI
SceS000001643
IMP
SceS000001643
ISS
SpoSPAC1B3.02c
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IGI
SceS000001643
IMP
SceS000001643
ISS
SpoSPAC1B3.02c
GO:0008150 biological_process P
ND
AthAt5g46030
DmeFBgn0036531
MmuMGI:1913376
GO:0032784 regulation of RNA elongation P
ISS
SpoSPAC1B3.02c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC1B3.02c
(O13868)		 YKL160W
(S000001643)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000001643
SpoSPAC1B3.02c
ISS
SpoSPAC1B3.02c
GO:0008270 zinc ion binding F
ISS
SpoSPAC1B3.02c
GO:0016944 RNA polymerase II transcription elongation factor
activity		 F
IGI
SceS000001643
IMP
SceS000001643
ISS
SpoSPAC1B3.02c
GO:0006325 chromatin organization P
IGI
SceS000001643
IMP
SceS000001643
ISS
SpoSPAC1B3.02c
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IGI
SceS000001643
IMP
SceS000001643
ISS
SpoSPAC1B3.02c
GO:0032784 regulation of RNA elongation P
ISS
SpoSPAC1B3.02c

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