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Search term: YKR053C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name YSR3
SGD link S000001761
Alternative ID YKR053C
Description Dihydrosphingosine 1-phosphate phosphatase, membrane protein involved in sphingolipid metabolism; has similarity to Lcb3p
Synonyms YKR053C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2822 A--HYP-

KOGs classification KOGs description
METABOLISM Sphingoid base-phosphate phosphatase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g58490 GI:15231046
Homo sapiens (Hsa) Hs20537723 GI:20537723
Homo sapiens (Hsa) Hs13540569
(SGPP1)		 GI:13540569 Q9BX95
Saccharomyces cerevisiae (Sce) YJL134w
(S000003670)		 GI:6322327 P47013
Saccharomyces cerevisiae (Sce) YKR053c
(S000001761)		 GI:6322906 P23501
Schizosaccharomyces pombe (Spo) SPAC823.11 GI:19114750 Q9P6N5


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005783 endoplasmic reticulum C
IDA
SceS000003670
S000001761
GO:0005789 endoplasmic reticulum membrane C
ISS
SpoSPAC823.11
GO:0003674 molecular_function F
ND
SpoSPAC823.11
GO:0042392 sphingosine-1-phosphate phosphatase
activity		 F
IDA
SceS000001761
S000003670
ISS
AthAt3g58490
TAS
SceS000003670
GO:0042578 phosphoric ester hydrolase activity F
ISS
AthAt3g58490
GO:0009737 response to abscisic acid stimulus P
IMP
AthAt3g58490
GO:0019722 calcium-mediated signaling P
IMP
SceS000003670
GO:0030148 sphingolipid biosynthetic process P
ISS
SpoSPAC823.11
TAS
SceS000001761
S000003670

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
21949

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC823.11 GI:19114750 Q9P6N5
Saccharomyces cerevisiae (Sce) LCB3
(S000003670)		 GI:6322327 P47013
Saccharomyces cerevisiae (Sce) YSR3
(S000001761)		 GI:6322906 P23501
Kluyveromyces lactis (Kla) KLLA0A05588g GI:50302623
Eremothecium gossypii (Ego) AGOS_ACR259W GI:45185945
Magnaporthe grisea (Mgr) MGG_09184 GI:145605563
Neurospora crassa (Ncr) NCU03504.1 GI:32404298
Arabidopsis thaliana (Ath) AT3G58490 GI:15231046
Oryza sativa (Osa) Os03g0805400 GI:115456055


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005783 endoplasmic reticulum C
IDA
SceS000003670
S000001761
GO:0005789 endoplasmic reticulum membrane C
ISS
SpoSPAC823.11
GO:0003674 molecular_function F
ND
SpoSPAC823.11
GO:0042392 sphingosine-1-phosphate phosphatase
activity		 F
IDA
SceS000001761
S000003670
ISS
AthAt3g58490
TAS
SceS000003670
GO:0042578 phosphoric ester hydrolase activity F
ISS
AthAt3g58490
GO:0009737 response to abscisic acid stimulus P
IMP
AthAt3g58490
GO:0019722 calcium-mediated signaling P
IMP
SceS000003670
GO:0030148 sphingolipid biosynthetic process P
ISS
SpoSPAC823.11
TAS
SceS000001761
S000003670

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_4134

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago1306 ACR259W
Arabidopsis thaliana (Ath) ath17255 At3g58490.1
Candida glabrata (Cgl) cgl2708 CAGL0I04334g
Candida glabrata (Cgl) cgl3878 CAGL0K08272g
Cryptococcus neoformans (Cne) cne1196 180.m00125
Dictyostelium discoideum (Ddi) ddi11615 DDB0216187
Debaryomyces hansenii (Dha) dha3041 DEHA0D16533g
Takifugu rubripes (Fru) fru20523 SINFRUP00000137146
Gallus gallus (Gga) gga23242 ENSGALP00000008413
(SGPP2)
Homo sapiens (Hsa) hsa19361 ENSP00000315137
(SGPP2)		 Q8IWX5
Kluyveromyces lactis (Kla) kla244 KLLA0A05588g
Kluyveromyces lactis (Kla) kla245 KLLA0A05599g
Mus musculus (Mmu) mmu615 ENSMUSP00000036656
(MGI:3589109)		 Q810K3
Neurospora crassa (Ncr) ncr3396 NCU03504.2
Oryza sativa (Osa) osa87908 9532.m00141
Rattus norvegicus (Rno) rno30304 ENSRNOP00000018882
(RGD:1565739)
Saccharomyces cerevisiae (Sce) sce3397 YJL134W
(S000003670)
Saccharomyces cerevisiae (Sce) sce3952 YKR053C
(S000001761)
Schizosaccharomyces pombe (Spo) spo1335 SPAC823.11 Q9P6N5
Yarrowia lipolytica (Yli) yli4739 YALI0E21197g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005783 endoplasmic reticulum C
IDA
SceS000003670
S000001761
GO:0005789 endoplasmic reticulum membrane C
ISS
SpoSPAC823.11
GO:0003674 molecular_function F
ND
SpoSPAC823.11
GO:0042392 sphingosine-1-phosphate phosphatase
activity		 F
IDA
SceS000001761
S000003670
ISS
AthAt3g58490
TAS
SceS000003670
GO:0042578 phosphoric ester hydrolase activity F
ISS
AthAt3g58490
GO:0009737 response to abscisic acid stimulus P
IMP
AthAt3g58490
GO:0019722 calcium-mediated signaling P
IMP
SceS000003670
GO:0030148 sphingolipid biosynthetic process P
ISS
SpoSPAC823.11
TAS
SceS000001761
S000003670

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC823.11
(Q9P6N5)		 YKR053C
(S000001761)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005783 endoplasmic reticulum C
IDA
SceS000001761
GO:0005789 endoplasmic reticulum membrane C
ISS
SpoSPAC823.11
GO:0003674 molecular_function F
ND
SpoSPAC823.11
GO:0042392 sphingosine-1-phosphate phosphatase
activity		 F
IDA
SceS000001761
GO:0030148 sphingolipid biosynthetic process P
ISS
SpoSPAC823.11
TAS
SceS000001761

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GO info in one table:

s.khadayate@ucl.ac.uk