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Search term: YKR057W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPS21A
SGD link S000001765
Alternative ID YKR057W
Description Protein component of the small (40S) ribosomal subunit; nearly identical to Rps21Bp and has similarity to rat S21 ribosomal protein
Synonyms YKR057W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3486 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 40S ribosomal protein S21

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g27450 GI:15232165
Arabidopsis thaliana (Ath) At3g53890 GI:15232356
Arabidopsis thaliana (Ath) At5g27700 GI:15241026
Caenorhabditis elegans (Cel) CE00824 GI:17554778
Drosophila melanogaster (Dme) 7295891
(FBgn0015521)		 GI:17647757
Homo sapiens (Hsa) Hs4506699
(RPS21)		 GI:4506699 P63220
Homo sapiens (Hsa) Hs18551500_1 GI:18551500
Homo sapiens (Hsa) Hs18557734 GI:18557734
Homo sapiens (Hsa) Hs22045776 GI:22045776
Homo sapiens (Hsa) Hs20548601 GI:20548601
Saccharomyces cerevisiae (Sce) YJL136c
(S000003672)		 GI:6322325 Q3E754
Saccharomyces cerevisiae (Sce) YKR057w
(S000001765)		 GI:6322910 P05760
Schizosaccharomyces pombe (Spo) SPBC18E5.06 GI:19112644 P05764


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC18E5.06
GO:0005737 cytoplasm C
IDA
DmeFBgn0015521
HsaRPS21
GO:0005829 cytosol C
EXP
HsaRPS21
IDA
SpoSPBC18E5.06
GO:0005840 ribosome C
ISS
AthAt5g27700
At3g53890
GO:0015935 small ribosomal subunit C
IDA
HsaRPS21
TAS
SpoSPBC18E5.06
GO:0022626 cytosolic ribosome C
IDA
AthAt3g53890
NAS
SpoSPBC18E5.06
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt3g53890
At5g27700
HsaRPS21
SceS000003672
S000001765
ISS
DmeFBgn0015521
NAS
HsaRPS21
GO:0003735 structural constituent of ribosome F
IDA
SceS000001765
S000003672
ISS
AthAt5g27700
At3g53890
DmeFBgn0015521
GO:0005515 protein binding F
IPI
SpoSPBC18E5.06
GO:0043022 ribosome binding F
IPI
DmeFBgn0015521
GO:0047485 protein N-terminus binding F
IPI
HsaRPS21
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001765
S000003672
GO:0000461 endonucleolytic cleavage to generate mature 3'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000003672
S000001765
GO:0006412 translation P
IC
HsaRPS21
SceS000001765
S000003672
SpoSPBC18E5.06
ISS
AthAt3g53890
At5g27700
DmeFBgn0015521
NAS
HsaRPS21
GO:0006414 translational elongation P
EXP
HsaRPS21
GO:0042254 ribosome biogenesis P
ISS
AthAt5g27700
At3g53890
GO:0042274 ribosomal small subunit biogenesis P
IMP
SpoSPBC18E5.06
GO:0048542 lymph gland development P
IMP
DmeFBgn0015521

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
90915

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPS21 GI:4506699 P63220
Pan troglodytes (Ptr) LOC737911 GI:114682951
Pan troglodytes (Ptr) LOC458388 GI:114685476
Canis familiaris (Cfa) RPS21 GI:73992422
Mus musculus (Mmu) Rps21
(MGI:1913731)		 GI:21536222 Q9CQR2
Rattus norvegicus (Rno) Rps21
(RGD:621038)		 GI:13592073
Gallus gallus (Gga) RPS21 GI:118100676
Drosophila melanogaster (Dme) oho23B
(FBgn0015521)		 GI:17647757
Anopheles gambiae (Aga) AgaP_AGAP009431 GI:158284753
Caenorhabditis elegans (Cel) rps-21
(CE30779;
WBGene00004490)		 GI:25151735
Schizosaccharomyces pombe (Spo) rps21
(SPBC18E5.06)		 GI:19112644 P05764
Saccharomyces cerevisiae (Sce) RPS21B
(S000003672)		 GI:6322325 Q3E754
Saccharomyces cerevisiae (Sce) RPS21A
(S000001765)		 GI:6322910 P05760
Kluyveromyces lactis (Kla) KLLA0A05700g GI:50302635
Eremothecium gossypii (Ego) AGOS_ACR255C GI:45185941
Magnaporthe grisea (Mgr) MGG_06837 GI:39977905
Neurospora crassa (Ncr) NCU08627.1 GI:32418546
Arabidopsis thaliana (Ath) AT3G53890 GI:145332829
Arabidopsis thaliana (Ath) AT5G27700 GI:15241026
Oryza sativa (Osa) Os03g0345200 GI:115452975
Oryza sativa (Osa) Os03g0667800 GI:115454509


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC18E5.06
GO:0005737 cytoplasm C
IDA
DmeFBgn0015521
HsaRPS21
GO:0005829 cytosol C
EXP
HsaRPS21
IDA
SpoSPBC18E5.06
GO:0005840 ribosome C
ISS
AthAt5g27700
At3g53890
GO:0015935 small ribosomal subunit C
IDA
HsaRPS21
TAS
SpoSPBC18E5.06
GO:0022626 cytosolic ribosome C
IDA
AthAt3g53890
NAS
SpoSPBC18E5.06
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt3g53890
At5g27700
HsaRPS21
SceS000003672
S000001765
ISO
MmuMGI:1913731
ISS
DmeFBgn0015521
NAS
HsaRPS21
GO:0003674 molecular_function F
ND
MmuMGI:1913731
GO:0003735 structural constituent of ribosome F
IDA
SceS000001765
S000003672
ISS
AthAt5g27700
At3g53890
DmeFBgn0015521
GO:0005515 protein binding F
IPI
SpoSPBC18E5.06
GO:0043022 ribosome binding F
IPI
DmeFBgn0015521
GO:0047485 protein N-terminus binding F
IPI
HsaRPS21
GO:0000003 reproduction P
IMP
CelWBGene00004490
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001765
S000003672
GO:0000461 endonucleolytic cleavage to generate mature 3'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000003672
S000001765
GO:0002119 nematode larval development P
IMP
CelWBGene00004490
GO:0006412 translation P
IC
HsaRPS21
SceS000001765
S000003672
SpoSPBC18E5.06
ISS
AthAt3g53890
At5g27700
DmeFBgn0015521
NAS
HsaRPS21
GO:0006414 translational elongation P
EXP
HsaRPS21
GO:0008150 biological_process P
ND
MmuMGI:1913731
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004490
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00004490
GO:0040007 growth P
IMP
CelWBGene00004490
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004490
GO:0042254 ribosome biogenesis P
ISS
AthAt5g27700
At3g53890
GO:0042274 ribosomal small subunit biogenesis P
IMP
SpoSPBC18E5.06
GO:0048542 lymph gland development P
IMP
DmeFBgn0015521

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1563

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga11590 ENSANGP00000018631
Ashbya gossypii (Ago) ago1302 ACR255C
Arabidopsis thaliana (Ath) ath16746 At3g53890.1
Arabidopsis thaliana (Ath) ath25044 At5g27700.1
Caenorhabditis elegans (Cel) cel8410 F37C12.11
(CE30779;
WBGene00004490)
Candida glabrata (Cgl) cgl3883 CAGL0K08382g
Cryptococcus neoformans (Cne) cne536 163.m02584
Dictyostelium discoideum (Ddi) ddi13414 DDB0231061
Debaryomyces hansenii (Dha) dha3038 DEHA0D16467g
Drosophila melanogaster (Dme) dme477 CG2986-PA
(FBgn0015521)
Drosophila melanogaster (Dme) dme480 CG2986-PB
(FBgn0015521)
Drosophila melanogaster (Dme) dme479 CG2986-PC
(FBgn0015521)
Drosophila melanogaster (Dme) dme478 CG2986-PD
(FBgn0015521)
Danio rerio (Dre) dre30194 ENSDARP00000031181
(rps21)		 Q7ZUG5
Takifugu rubripes (Fru) fru7082 SINFRUP00000136519
Gallus gallus (Gga) gga11966 ENSGALP00000008548
Homo sapiens (Hsa) hsa20580 ENSP00000324438
(RPS21)		 P63220
Homo sapiens (Hsa) hsa20579 ENSP00000345957
(RPS21)		 P63220
Kluyveromyces lactis (Kla) kla250 KLLA0A05700g
Mus musculus (Mmu) mmu16246 ENSMUSP00000046454
Mus musculus (Mmu) mmu16247 ENSMUSP00000058432
(MGI:1913731)		 Q9CQR2
Neurospora crassa (Ncr) ncr8408 NCU08627.2
Oryza sativa (Osa) osa36996 4853.m00107
Oryza sativa (Osa) osa63495 6737.m00179
Oryza sativa (Osa) osa65836 6879.m00048
Plasmodium falciparum (Pfa) pfa901 PF11_0454
Rattus norvegicus (Rno) rno20474 ENSRNOP00000008458
(RGD:621038)		 P05765
Rattus norvegicus (Rno) rno20473 ENSRNOP00000040119
Saccharomyces cerevisiae (Sce) sce3399 YJL136C
(S000003672)
Saccharomyces cerevisiae (Sce) sce3956 YKR057W
(S000001765)
Schizosaccharomyces pombe (Spo) spo4792 SPBC18E5.06 P05764
Yarrowia lipolytica (Yli) yli3287 YALI0D13794g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC18E5.06
GO:0005737 cytoplasm C
IDA
DmeFBgn0015521
GO:0005829 cytosol C
IDA
SpoSPBC18E5.06
GO:0005840 ribosome C
ISS
AthAt5g27700
At3g53890
GO:0015935 small ribosomal subunit C
TAS
SpoSPBC18E5.06
GO:0022626 cytosolic ribosome C
IDA
AthAt3g53890
NAS
SpoSPBC18E5.06
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt3g53890
At5g27700
SceS000003672
S000001765
ISO
MmuMGI:1913731
ISS
DmeFBgn0015521
PfaPF11_0454
GO:0003674 molecular_function F
ND
MmuMGI:1913731
GO:0003735 structural constituent of ribosome F
IDA
SceS000001765
S000003672
ISS
AthAt5g27700
At3g53890
DmeFBgn0015521
GO:0005515 protein binding F
IPI
SpoSPBC18E5.06
GO:0043022 ribosome binding F
IPI
DmeFBgn0015521
GO:0000003 reproduction P
IMP
CelWBGene00004490
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001765
S000003672
GO:0000461 endonucleolytic cleavage to generate mature 3'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000003672
S000001765
GO:0002119 nematode larval development P
IMP
CelWBGene00004490
GO:0006412 translation P
IC
SceS000001765
S000003672
SpoSPBC18E5.06
ISS
AthAt3g53890
At5g27700
DmeFBgn0015521
GO:0008150 biological_process P
ND
MmuMGI:1913731
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004490
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00004490
GO:0040007 growth P
IMP
CelWBGene00004490
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004490
GO:0042254 ribosome biogenesis P
ISS
AthAt5g27700
At3g53890
GO:0042274 ribosomal small subunit biogenesis P
IMP
SpoSPBC18E5.06
GO:0048542 lymph gland development P
IMP
DmeFBgn0015521

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC18E5.06
(P05764)		 YKR057W
(S000001765)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC18E5.06
GO:0005829 cytosol C
IDA
SpoSPBC18E5.06
GO:0015935 small ribosomal subunit C
TAS
SpoSPBC18E5.06
GO:0022626 cytosolic ribosome C
NAS
SpoSPBC18E5.06
GO:0022627 cytosolic small ribosomal subunit C
IDA
SceS000001765
GO:0003735 structural constituent of ribosome F
IDA
SceS000001765
GO:0005515 protein binding F
IPI
SpoSPBC18E5.06
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001765
GO:0000461 endonucleolytic cleavage to generate mature 3'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000001765
GO:0006412 translation P
IC
SceS000001765
SpoSPBC18E5.06
GO:0042274 ribosomal small subunit biogenesis P
IMP
SpoSPBC18E5.06

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