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Search term: YKR068C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name BET3
SGD link S000001776
Alternative ID YKR068C
Description Hydrophilic protein that acts in conjunction with SNARE proteins in targeting and fusion of ER to Golgi transport vesicles; component of the TRAPP (transport protein particle) complex
Synonyms YKR068C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3330 ACDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Transport protein particle (TRAPP) complex subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g54750 GI:15239731
Caenorhabditis elegans (Cel) CE00368
(WBGene00014222)		 GI:17557125 P34605
Drosophila melanogaster (Dme) 7294941 GI:7294941
Homo sapiens (Hsa) Hs7656926
(TRAPPC3)		 GI:7656926 O43617
Homo sapiens (Hsa) Hs20551744 GI:20551744
Saccharomyces cerevisiae (Sce) YKR068c
(S000001776)		 GI:6322921 P36149
Schizosaccharomyces pombe (Spo) SPAC644.18c GI:19114798 Q9P6P5


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g54750
GO:0005634 nucleus C
IDA
SpoSPAC644.18c
GO:0005794 Golgi apparatus C
IDA
SceS000001776
GO:0005829 cytosol C
IDA
SpoSPAC644.18c
GO:0030008 TRAPP complex C
IDA
SceS000001776
ISS
SpoSPAC644.18c
GO:0003674 molecular_function F
ND
AthAt5g54750
GO:0017112 Rab guanyl-nucleotide exchange factor
activity		 F
IDA
SceS000001776
IGI
SceS000001776
ISS
SpoSPAC644.18c
GO:0000003 reproduction P
IMP
CelWBGene00014222
GO:0006886 intracellular protein transport P
ISS
SpoSPAC644.18c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000001776
ISS
AthAt5g54750
SpoSPAC644.18c
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00014222
GO:0010171 body morphogenesis P
IMP
CelWBGene00014222
GO:0016192 vesicle-mediated transport P
RCA
SceS000001776
GO:0032313 regulation of Rab GTPase activity P
IC
SpoSPAC644.18c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6399

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) TRAPPC3 GI:7656926 O43617
Pan troglodytes (Ptr) TRAPPC3 GI:114555735
Canis familiaris (Cfa) TRAPPC3 GI:73977068
Mus musculus (Mmu) Trappc3
(MGI:1351486)		 GI:7304929 O55013
Rattus norvegicus (Rno) Trappc3
(RGD:1309135)		 GI:56605828
Gallus gallus (Gga) TRAPPC3 GI:56605900
Drosophila melanogaster (Dme) CG3911
(FBgn0035992)		 GI:45550579
Schizosaccharomyces pombe (Spo) bet3
(SPAC644.18c)		 GI:19114798 Q9P6P5
Saccharomyces cerevisiae (Sce) BET3
(S000001776)		 GI:6322921 P36149
Kluyveromyces lactis (Kla) KLLA0F16126g GI:50311563
Eremothecium gossypii (Ego) AGOS_AGR300W GI:45201396
Magnaporthe grisea (Mgr) MGG_04694 GI:39945424
Neurospora crassa (Ncr) NCU05796.1 GI:32410341
Arabidopsis thaliana (Ath) AT5G54750 GI:15239731
Oryza sativa (Osa) Os03g0402000 GI:115453441
Oryza sativa (Osa) Os07g0642300 GI:115473673
Plasmodium falciparum (Pfa) PFD0895c GI:124505503


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000139 Golgi membrane C
IDA
MmuMGI:1351486
GO:0005575 cellular_component C
ND
AthAt5g54750
GO:0005634 nucleus C
IDA
SpoSPAC644.18c
GO:0005794 Golgi apparatus C
IDA
SceS000001776
GO:0005829 cytosol C
IDA
MmuMGI:1351486
SpoSPAC644.18c
GO:0030008 TRAPP complex C
IDA
MmuMGI:1351486
SceS000001776
ISS
SpoSPAC644.18c
GO:0003674 molecular_function F
ND
AthAt5g54750
GO:0005215 transporter activity F
ISS
PfaPFD0895c
GO:0005515 protein binding F
IPI
MmuMGI:1351486
GO:0017112 Rab guanyl-nucleotide exchange factor
activity		 F
IDA
SceS000001776
IGI
SceS000001776
ISS
SpoSPAC644.18c
GO:0006886 intracellular protein transport P
ISS
SpoSPAC644.18c
GO:0006888 ER to Golgi vesicle-mediated transport P
IDA
MmuMGI:1351486
IMP
SceS000001776
ISS
AthAt5g54750
PfaPFD0895c
SpoSPAC644.18c
GO:0016192 vesicle-mediated transport P
RCA
SceS000001776
GO:0032313 regulation of Rab GTPase activity P
IC
SpoSPAC644.18c

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2408

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga2800 ENSANGP00000009486
Ashbya gossypii (Ago) ago4611 AGR300W
Arabidopsis thaliana (Ath) ath27460 At5g54750.1
Caenorhabditis elegans (Cel) cel21551 ZK1098.5
(CE00368;
WBGene00014222)
Candida glabrata (Cgl) cgl3872 CAGL0K08140g
Cryptococcus neoformans (Cne) cne4187 177.m02945
Dictyostelium discoideum (Ddi) ddi3344 DDB0202609
Debaryomyces hansenii (Dha) dha3574 DEHA0E07513g
Drosophila melanogaster (Dme) dme8767 CG3911-PA
(FBgn0035992)
Danio rerio (Dre) dre10527 ENSDARP00000003231
Takifugu rubripes (Fru) fru22183 SINFRUP00000159045
Gallus gallus (Gga) gga12931 ENSGALP00000003580
(TRAPPC3)		 Q5ZI57
Homo sapiens (Hsa) hsa849 ENSP00000063037
Kluyveromyces lactis (Kla) kla4806 KLLA0F16126g
Mus musculus (Mmu) mmu18893 ENSMUSP00000030660
(MGI:1351486)		 O55013
Neurospora crassa (Ncr) ncr5634 NCU05796.2
Oryza sativa (Osa) osa1143 1047.m00109
Oryza sativa (Osa) osa46617 5714.m00136
Oryza sativa (Osa) osa56625 6197.m00140
Plasmodium falciparum (Pfa) pfa3337 PFD0895c
Rattus norvegicus (Rno) rno23930 ENSRNOP00000014383
(RGD:1309135)		 Q5U1Z2
Saccharomyces cerevisiae (Sce) sce3967 YKR068C
(S000001776)
Schizosaccharomyces pombe (Spo) spo4028 SPAC644.18c Q9P6P5
Yarrowia lipolytica (Yli) yli2077 YALI0C08782g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000139 Golgi membrane C
IDA
MmuMGI:1351486
GO:0005575 cellular_component C
ND
AthAt5g54750
GO:0005634 nucleus C
IDA
SpoSPAC644.18c
GO:0005794 Golgi apparatus C
IDA
SceS000001776
GO:0005829 cytosol C
IDA
MmuMGI:1351486
SpoSPAC644.18c
GO:0030008 TRAPP complex C
IDA
MmuMGI:1351486
SceS000001776
ISS
SpoSPAC644.18c
GO:0003674 molecular_function F
ND
AthAt5g54750
GO:0005215 transporter activity F
ISS
PfaPFD0895c
GO:0005515 protein binding F
IPI
MmuMGI:1351486
GO:0017112 Rab guanyl-nucleotide exchange factor
activity		 F
IDA
SceS000001776
IGI
SceS000001776
ISS
SpoSPAC644.18c
GO:0000003 reproduction P
IMP
CelWBGene00014222
GO:0006886 intracellular protein transport P
ISS
SpoSPAC644.18c
GO:0006888 ER to Golgi vesicle-mediated transport P
IDA
MmuMGI:1351486
IMP
SceS000001776
ISS
AthAt5g54750
PfaPFD0895c
SpoSPAC644.18c
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00014222
GO:0010171 body morphogenesis P
IMP
CelWBGene00014222
GO:0016192 vesicle-mediated transport P
RCA
SceS000001776
GO:0032313 regulation of Rab GTPase activity P
IC
SpoSPAC644.18c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC644.18c
(Q9P6P5)		 YKR068C
(S000001776)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC644.18c
GO:0005794 Golgi apparatus C
IDA
SceS000001776
GO:0005829 cytosol C
IDA
SpoSPAC644.18c
GO:0030008 TRAPP complex C
IDA
SceS000001776
ISS
SpoSPAC644.18c
GO:0017112 Rab guanyl-nucleotide exchange factor
activity		 F
IDA
SceS000001776
IGI
SceS000001776
ISS
SpoSPAC644.18c
GO:0006886 intracellular protein transport P
ISS
SpoSPAC644.18c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000001776
ISS
SpoSPAC644.18c
GO:0016192 vesicle-mediated transport P
RCA
SceS000001776
GO:0032313 regulation of Rab GTPase activity P
IC
SpoSPAC644.18c

Back to the top
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GO info in one table:

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