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Search term: YKR084C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name HBS1
SGD link S000001792
Alternative ID YKR084C
Description GTP binding protein with sequence similarity to the elongation factor class of G proteins, EF-1alpha and Sup35p; associates with Dom34p, and shares a similar genetic relationship with genes that encode ribosomal protein components
Synonyms YKR084C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0458 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Elongation factor 1 alpha

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g10630_2 GI:15238216
Caenorhabditis elegans (Cel) CE25933 GI:17508141
Drosophila melanogaster (Dme) 7292173_2 GI:7292173
Homo sapiens (Hsa) Hs5729864_2
(HBS1L)
GI:5729864 Q9Y450
Saccharomyces cerevisiae (Sce) YKR084c
(S000001792)
GI:6322937 P32769
Saccharomyces cerevisiae (Sce) YOR076c
(S000005602)
GI:6324650 Q08491
Schizosaccharomyces pombe (Spo) SPAP8A3.05 GI:19115856 Q9UT10
Schizosaccharomyces pombe (Spo) SPBC2G5.08 GI:19112861
Arabidopsis thaliana (Ath) At5g10630_2 GI:15238216
Caenorhabditis elegans (Cel) CE25933 GI:17508141
Drosophila melanogaster (Dme) 7292173_2 GI:7292173
Homo sapiens (Hsa) Hs5729864_2
(HBS1L)
GI:5729864 Q9Y450
Saccharomyces cerevisiae (Sce) YKR084c
(S000001792)
GI:6322937 P32769
Saccharomyces cerevisiae (Sce) YOR076c
(S000005602)
GI:6324650 Q08491
Schizosaccharomyces pombe (Spo) SPAP8A3.05 GI:19115856 Q9UT10
Schizosaccharomyces pombe (Spo) SPBC2G5.08 GI:19112861
Arabidopsis thaliana (Ath) At5g10630_2 GI:15238216
Caenorhabditis elegans (Cel) CE25933 GI:17508141
Drosophila melanogaster (Dme) 7292173_2 GI:7292173
Homo sapiens (Hsa) Hs5729864_2
(HBS1L)
GI:5729864 Q9Y450
Saccharomyces cerevisiae (Sce) YKR084c
(S000001792)
GI:6322937 P32769
Saccharomyces cerevisiae (Sce) YOR076c
(S000005602)
GI:6324650 Q08491
Schizosaccharomyces pombe (Spo) SPAP8A3.05 GI:19115856 Q9UT10
Schizosaccharomyces pombe (Spo) SPBC2G5.08 GI:19112861


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000177 cytoplasmic exosome (RNase complex) C
IDA
SceS000005602
GO:0000178 exosome (RNase complex) C
ISS
SpoSPAP8A3.05
GO:0005634 nucleus C
IDA
SpoSPAP8A3.05
GO:0005737 cytoplasm C
IDA
SceS000005602
S000001792
GO:0005829 cytosol C
IDA
SpoSPAP8A3.05
GO:0055087 Ski complex C
IDA
SceS000005602
GO:0003674 molecular_function F
ND
SceS000001792
GO:0003746 translation elongation factor activity F
ISS
AthAt5g10630
GO:0005525 GTP binding F
ISS
SpoSPAP8A3.05
GO:0030674 protein binding, bridging F
IMP
SceS000005602
GO:0006401 RNA catabolic process P
RCA
SceS000005602
GO:0006402 mRNA catabolic process P
ISS
SpoSPAP8A3.05
GO:0006412 translation P
IMP
SceS000001792
IPI
SceS000001792
GO:0006415 translational termination P
RCA
SceS000001792
GO:0007165 signal transduction P
TAS
HsaHBS1L
GO:0008150 biological_process P
ND
AthAt5g10630
GO:0031123 RNA 3'-end processing P
RCA
SceS000005602
GO:0034427 nuclear-transcribed mRNA catabolic process,
exonucleolytic, 3'-5'
P
IGI
SceS000005602
IMP
SceS000005602
GO:0070478 nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated
decay
P
IGI
SceS000005602
IMP
SceS000005602
GO:0070481 nuclear-transcribed mRNA catabolic process,
non-stop decay
P
IMP
SceS000005602
GO:0070651 nonfunctional rRNA decay P
IMP
SceS000005602
S000001792
GO:0070966 nuclear-transcribed mRNA catabolic process, no-go
decay
P
IGI
SceS000001792

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
68525

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) HBS1L GI:5729864 Q9Y450
Pan troglodytes (Ptr) HBS1L GI:114609403
Canis familiaris (Cfa) HBS1L GI:73945574
Mus musculus (Mmu) Hbs1l
(MGI:1891704)
GI:110611224 Q3TGM7
Rattus norvegicus (Rno) Hbs1l
(RGD:1308509)
GI:58865446
Gallus gallus (Gga) HBS1L GI:118088523
Drosophila melanogaster (Dme) HBS1
(FBgn0042712)
GI:45550900
Anopheles gambiae (Aga) AgaP_AGAP002603 GI:158290767
Caenorhabditis elegans (Cel) K07A12.4
(CE39388;
WBGene00010622)
GI:115532065
Schizosaccharomyces pombe (Spo) SPBC25B2.01 GI:19112861 O74774
Saccharomyces cerevisiae (Sce) HBS1
(S000001792)
GI:6322937 P32769
Kluyveromyces lactis (Kla) KLLA0A07799g GI:50302821
Eremothecium gossypii (Ego) AGOS_ADR221C GI:45188094
Magnaporthe grisea (Mgr) MGG_02504 GI:145606160
Neurospora crassa (Ncr) NCU03981.1 GI:32405374
Oryza sativa (Osa) Os04g0677800 GI:115461336


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1891704
GO:0005737 cytoplasm C
IDA
SceS000001792
ISS
SpoSPBC25B2.01
GO:0005829 cytosol C
IDA
SpoSPBC25B2.01
ISS
DmeFBgn0042712
GO:0003674 molecular_function F
ND
SceS000001792
GO:0003747 translation release factor activity F
ISS
DmeFBgn0042712
GO:0005525 GTP binding F
ISS
MmuMGI:1891704
SpoSPBC25B2.01
GO:0006412 translation P
IMP
SceS000001792
IPI
SceS000001792
ISS
SpoSPBC25B2.01
GO:0006415 translational termination P
ISS
DmeFBgn0042712
RCA
SceS000001792
GO:0007165 signal transduction P
TAS
HsaHBS1L
GO:0008150 biological_process P
ND
MmuMGI:1891704
GO:0033554 cellular response to stress P
IEP
SpoSPBC25B2.01
GO:0070651 nonfunctional rRNA decay P
IMP
SceS000001792
GO:0070966 nuclear-transcribed mRNA catabolic process, no-go
decay
P
IGI
SceS000001792

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3247

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga4806 ENSANGP00000002945
Ashbya gossypii (Ago) ago1962 ADR221C
Arabidopsis thaliana (Ath) ath23267 At5g10630.1
Caenorhabditis elegans (Cel) cel12075 K07A12.4
(CE39388;
WBGene00010622)
Candida glabrata (Cgl) cgl1721 CAGL0G02255g
Cryptococcus neoformans (Cne) cne4992 186.m03905
Dictyostelium discoideum (Ddi) ddi12447 DDB0201566
Debaryomyces hansenii (Dha) dha1606 DEHA0C03960g
Drosophila melanogaster (Dme) dme7518 CG1898-PA
(FBgn0042712)
Danio rerio (Dre) dre15658 ENSDARP00000027728
Takifugu rubripes (Fru) fru27343 SINFRUP00000138567
Takifugu rubripes (Fru) fru27344 SINFRUP00000138569
Gallus gallus (Gga) gga15415 ENSGALP00000022592
(HBS1L)
Homo sapiens (Hsa) hsa27783 ENSP00000257985
Kluyveromyces lactis (Kla) kla344 KLLA0A07799g
Mus musculus (Mmu) mmu1902 ENSMUSP00000020153
(MGI:1891704)
Q69ZS7-1
Neurospora crassa (Ncr) ncr3863 NCU03981.2
Oryza sativa (Osa) osa9076 2691.m00161
Oryza sativa (Osa) osa45086 5372.m00158
Oryza sativa (Osa) osa43124 5442.m00093
Rattus norvegicus (Rno) rno216 ENSRNOP00000019734
(RGD:1308509)
Q6AXM7
Saccharomyces cerevisiae (Sce) sce3984 YKR084C
(S000001792)
Schizosaccharomyces pombe (Spo) spo3792 SPBC25B2.01 O74774
Yarrowia lipolytica (Yli) yli1044 YALI0B07557g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1891704
GO:0005737 cytoplasm C
IDA
SceS000001792
ISS
SpoSPBC25B2.01
GO:0005829 cytosol C
IDA
SpoSPBC25B2.01
ISS
DmeFBgn0042712
GO:0003674 molecular_function F
ND
SceS000001792
GO:0003746 translation elongation factor activity F
ISS
AthAt5g10630
GO:0003747 translation release factor activity F
ISS
DmeFBgn0042712
GO:0005525 GTP binding F
ISS
MmuMGI:1891704
SpoSPBC25B2.01
GO:0006412 translation P
IMP
SceS000001792
IPI
SceS000001792
ISS
SpoSPBC25B2.01
GO:0006415 translational termination P
ISS
DmeFBgn0042712
RCA
SceS000001792
GO:0008150 biological_process P
ND
AthAt5g10630
MmuMGI:1891704
GO:0033554 cellular response to stress P
IEP
SpoSPBC25B2.01
GO:0070651 nonfunctional rRNA decay P
IMP
SceS000001792
GO:0070966 nuclear-transcribed mRNA catabolic process, no-go
decay
P
IGI
SceS000001792

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC25B2.01
(O74774)
YKR084C
(S000001792)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000001792
ISS
SpoSPBC25B2.01
GO:0005829 cytosol C
IDA
SpoSPBC25B2.01
GO:0003674 molecular_function F
ND
SceS000001792
GO:0005525 GTP binding F
ISS
SpoSPBC25B2.01
GO:0006412 translation P
IMP
SceS000001792
IPI
SceS000001792
ISS
SpoSPBC25B2.01
GO:0006415 translational termination P
RCA
SceS000001792
GO:0033554 cellular response to stress P
IEP
SpoSPBC25B2.01
GO:0070651 nonfunctional rRNA decay P
IMP
SceS000001792
GO:0070966 nuclear-transcribed mRNA catabolic process, no-go
decay
P
IGI
SceS000001792

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Search for GO info:  

GO info in one table:

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