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KOG name | Phylogenetic pattern (and link to KOGs with this pattern) |
KOG0924 | ACDHYPE![]() |
KOGs classification | KOGs description |
INFORMATION STORAGE AND PROCESSING | mRNA splicing factor ATP-dependent RNA helicase |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0005575 | cellular_component | C |
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GO:0005634 | nucleus | C |
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GO:0005681 | spliceosomal complex | C |
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GO:0071007 | U2-type catalytic step 2 spliceosome | C |
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GO:0000386 | second spliceosomal transesterification activity | F |
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GO:0003724 | RNA helicase activity | F |
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GO:0004004 | ATP-dependent RNA helicase activity | F |
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GO:0005515 | protein binding | F |
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GO:0005524 | ATP binding | F |
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GO:0008186 | RNA-dependent ATPase activity | F |
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GO:0000350 | generation of catalytic spliceosome for second transesterification step | P |
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GO:0000398 | nuclear mRNA splicing, via spliceosome | P |
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GO:0002119 | nematode larval development | P |
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GO:0006898 | receptor-mediated endocytosis | P |
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GO:0008380 | RNA splicing | P |
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GO:0009792 | embryo development ending in birth or egg hatching | P |
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GO:0009793 | embryo development ending in seed dormancy | P |
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GO:0010171 | body morphogenesis | P |
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GO:0040022 | feminization of hermaphroditic germ-line | P |
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HomoloGene cluster | Phylogenetic pattern |
8512 | ![]() |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||||
GO:0005575 | cellular_component | C |
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GO:0005634 | nucleus | C |
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GO:0005681 | spliceosomal complex | C |
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GO:0071007 | U2-type catalytic step 2 spliceosome | C |
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GO:0000386 | second spliceosomal transesterification activity | F |
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GO:0003724 | RNA helicase activity | F |
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GO:0004004 | ATP-dependent RNA helicase activity | F |
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GO:0005515 | protein binding | F |
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GO:0008026 | ATP-dependent helicase activity | F |
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GO:0008186 | RNA-dependent ATPase activity | F |
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GO:0000350 | generation of catalytic spliceosome for second transesterification step | P |
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GO:0000381 | regulation of alternative nuclear mRNA splicing, via spliceosome | P |
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GO:0000398 | nuclear mRNA splicing, via spliceosome | P |
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GO:0002119 | nematode larval development | P |
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GO:0002121 | inter-male aggressive behavior | P |
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GO:0006898 | receptor-mediated endocytosis | P |
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GO:0008380 | RNA splicing | P |
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GO:0009792 | embryo development ending in birth or egg hatching | P |
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GO:0009793 | embryo development ending in seed dormancy | P |
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GO:0010171 | body morphogenesis | P |
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GO:0040022 | feminization of hermaphroditic germ-line | P |
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OrthoMCL cluster | Phylogenetic pattern |
OG1_2187 | ![]() |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0005575 | cellular_component | C |
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GO:0005634 | nucleus | C |
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GO:0005681 | spliceosomal complex | C |
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GO:0071007 | U2-type catalytic step 2 spliceosome | C |
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GO:0000386 | second spliceosomal transesterification activity | F |
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GO:0003724 | RNA helicase activity | F |
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GO:0004004 | ATP-dependent RNA helicase activity | F |
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GO:0005524 | ATP binding | F |
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GO:0008026 | ATP-dependent helicase activity | F |
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GO:0008186 | RNA-dependent ATPase activity | F |
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GO:0000350 | generation of catalytic spliceosome for second transesterification step | P |
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GO:0000381 | regulation of alternative nuclear mRNA splicing, via spliceosome | P |
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GO:0000398 | nuclear mRNA splicing, via spliceosome | P |
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GO:0002119 | nematode larval development | P |
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GO:0002121 | inter-male aggressive behavior | P |
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GO:0006898 | receptor-mediated endocytosis | P |
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GO:0009792 | embryo development ending in birth or egg hatching | P |
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GO:0009793 | embryo development ending in seed dormancy | P |
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GO:0010171 | body morphogenesis | P |
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GO:0040022 | feminization of hermaphroditic germ-line | P |
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Curated yeast ortholog results:
S. pombe systematic ID | S. cerevisiae systematic ID |
SPBC1711.17 (Q9P774) | YKR086W (S000001794) |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0005634 | nucleus | C |
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GO:0005681 | spliceosomal complex | C |
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GO:0071007 | U2-type catalytic step 2 spliceosome | C |
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GO:0000386 | second spliceosomal transesterification activity | F |
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GO:0004004 | ATP-dependent RNA helicase activity | F |
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GO:0005524 | ATP binding | F |
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GO:0008186 | RNA-dependent ATPase activity | F |
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GO:0000350 | generation of catalytic spliceosome for second transesterification step | P |
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s.khadayate@ucl.ac.uk |