YOGY Home YOGY Help

Search term: YKR092C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SRP40
SGD link S000001800
Alternative ID YKR092C
Description Nucleolar, serine-rich protein with a role in preribosome assembly or transport; may function as a chaperone of small nucleolar ribonucleoprotein particles (snoRNPs); immunologically and structurally to rat Nopp140
Synonyms YKR092C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2992 ACDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Nucleolar GTPase/ATPase p130

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g40040_1 GI:15225617
Arabidopsis thaliana (Ath) At5g57120 GI:15242038
Caenorhabditis elegans (Cel) CE08376
(WBGene00000931)
GI:17505713
Caenorhabditis elegans (Cel) CE09380
(WBGene00008789)
GI:17559624 Q19452
Drosophila melanogaster (Dme) 7295875_1
(FBgn0004584)
GI:17136678 B7YZZ9
Drosophila melanogaster (Dme) 7296502 GI:7296502
Drosophila melanogaster (Dme) 7296503 GI:7296503
Homo sapiens (Hsa) Hs4758860_3 GI:4758860
Saccharomyces cerevisiae (Sce) YKR092c
(S000001800)
GI:6322945 P32583
Schizosaccharomyces pombe (Spo) SPBC1711.05 GI:19112670 Q9P785


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
NAS
DmeFBgn0004584
GO:0005654 nucleoplasm C
IDA
CelWBGene00000931
GO:0005730 nucleolus C
IDA
AthAt5g57120
CelWBGene00000931
SceS000001800
SpoSPBC1711.05
ISS
SpoSPBC1711.05
GO:0003674 molecular_function F
ND
AthAt5g57120
SceS000001800
SpoSPBC1711.05
GO:0003906 DNA-(apurinic or apyrimidinic site) lyase
activity
F
IDA
DmeFBgn0004584
ISS
DmeFBgn0004584
GO:0004871 signal transducer activity F
TAS
CelWBGene00000931
GO:0008311 double-stranded DNA specific 3'-5'
exodeoxyribonuclease activity
F
NAS
DmeFBgn0004584
GO:0008408 3'-5' exonuclease activity F
IDA
DmeFBgn0004584
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00008789
GO:0006281 DNA repair P
ISS
DmeFBgn0004584
GO:0006605 protein targeting P
NAS
SpoSPBC1711.05
GO:0006913 nucleocytoplasmic transport P
ISS
SceS000001800
SpoSPBC1711.05
GO:0006974 response to DNA damage stimulus P
IMP
DmeFBgn0004584
GO:0008150 biological_process P
ND
AthAt5g57120
GO:0008286 insulin receptor signaling pathway P
IGI
CelWBGene00000931
GO:0008340 determination of adult lifespan P
IGI
CelWBGene00000931
GO:0009303 rRNA transcription P
ISS
CelWBGene00000931
GO:0040024 dauer larval development P
TAS
CelWBGene00000931

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
122169

Species Gene ID NCBI link UniProt link
Drosophila melanogaster (Dme) Nopp140
(FBgn0037137)
GI:24668401
Schizosaccharomyces pombe (Spo) SPBC1711.05 GI:19112670 Q9P785
Saccharomyces cerevisiae (Sce) SRP40
(S000001800)
GI:6322945 P32583
Kluyveromyces lactis (Kla) KLLA0E13079g GI:50309065
Magnaporthe grisea (Mgr) MGG_00613 GI:39974481
Neurospora crassa (Ncr) NCU04047.1 GI:32405506


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SceS000001800
SpoSPBC1711.05
ISS
DmeFBgn0037137
SpoSPBC1711.05
TAS
DmeFBgn0037137
GO:0003674 molecular_function F
ND
SceS000001800
SpoSPBC1711.05
GO:0006605 protein targeting P
NAS
SpoSPBC1711.05
GO:0006913 nucleocytoplasmic transport P
ISS
SceS000001800
SpoSPBC1711.05
GO:0017126 nucleologenesis P
ISS
DmeFBgn0037137

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_93

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga778 ENSANGP00000020890
Ashbya gossypii (Ago) ago459 ABL133C
Ashbya gossypii (Ago) ago629 ABR038C
Ashbya gossypii (Ago) ago975 ACL074W
Arabidopsis thaliana (Ath) ath9688 At2g27380.1
Caenorhabditis elegans (Cel) cel2618 C25A1.10
Caenorhabditis elegans (Cel) cel8056 F35A5.1
(CE41805;
WBGene00018024)
Caenorhabditis elegans (Cel) cel11768 K03C7.1
Caenorhabditis elegans (Cel) cel14034 R144.4a
(CE34587;
WBGene00020094)
Caenorhabditis elegans (Cel) cel14035 R144.4b
(CE34588)
Candida glabrata (Cgl) cgl1664 CAGL0G00968g
Candida glabrata (Cgl) cgl1728 CAGL0G02409g
Cryptococcus neoformans (Cne) cne98 162.m02746
Cryptococcus neoformans (Cne) cne1056 163.m06600
Cryptococcus neoformans (Cne) cne3148 167.m03485
Dictyostelium discoideum (Ddi) ddi2206 DDB0167563
Dictyostelium discoideum (Ddi) ddi11303 DDB0183896
Dictyostelium discoideum (Ddi) ddi11530 DDB0231673
Dictyostelium discoideum (Ddi) ddi12140 DDB0231674
Dictyostelium discoideum (Ddi) ddi12597 DDB0231675
Debaryomyces hansenii (Dha) dha1924 DEHA0C11132g
Debaryomyces hansenii (Dha) dha3673 DEHA0E09779g
Drosophila melanogaster (Dme) dme9971 CG13731-PA
(FBgn0036717)
Drosophila melanogaster (Dme) dme12197 CG4795-PA
(FBgn0010218)
Drosophila melanogaster (Dme) dme12198 CG4795-PB
(FBgn0010218)
Drosophila melanogaster (Dme) dme10672 CG7421-PA
(FBgn0037137)
Drosophila melanogaster (Dme) dme10673 CG7421-PB
(FBgn0037137)
Drosophila melanogaster (Dme) dme13283 CG7709-PA
(FBgn0038642)
Danio rerio (Dre) dre9803 ENSDARP00000011773
Danio rerio (Dre) dre26595 ENSDARP00000012078
Danio rerio (Dre) dre1333 ENSDARP00000017416
Danio rerio (Dre) dre14830 ENSDARP00000022938
Danio rerio (Dre) dre21724 ENSDARP00000028668
Danio rerio (Dre) dre9802 ENSDARP00000031178
Danio rerio (Dre) dre12848 ENSDARP00000031351
(prg4)
Q32PL6
Danio rerio (Dre) dre718 ENSDARP00000031927
Danio rerio (Dre) dre5930 ENSDARP00000033210 Q7SXP7
Danio rerio (Dre) dre26556 ENSDARP00000037146
Danio rerio (Dre) dre9192 ENSDARP00000041836
Danio rerio (Dre) dre9194 ENSDARP00000044208
Danio rerio (Dre) dre9193 ENSDARP00000045741
Danio rerio (Dre) dre1332 ENSDARP00000048938
Danio rerio (Dre) dre3009 ENSDARP00000050104
Takifugu rubripes (Fru) fru3215 SINFRUP00000127547
Takifugu rubripes (Fru) fru3211 SINFRUP00000127548
Takifugu rubripes (Fru) fru3214 SINFRUP00000127549
Takifugu rubripes (Fru) fru3212 SINFRUP00000127550
Takifugu rubripes (Fru) fru3208 SINFRUP00000127551
Takifugu rubripes (Fru) fru20953 SINFRUP00000131188
Takifugu rubripes (Fru) fru20952 SINFRUP00000143172
Takifugu rubripes (Fru) fru20954 SINFRUP00000143178
Takifugu rubripes (Fru) fru31856 SINFRUP00000153245
Takifugu rubripes (Fru) fru3210 SINFRUP00000166481
Takifugu rubripes (Fru) fru3216 SINFRUP00000169811
Takifugu rubripes (Fru) fru3209 SINFRUP00000173353
Takifugu rubripes (Fru) fru3213 SINFRUP00000173421
Gallus gallus (Gga) gga24660 ENSGALP00000000667
Gallus gallus (Gga) gga22402 ENSGALP00000008204
Gallus gallus (Gga) gga24141 ENSGALP00000008258
Gallus gallus (Gga) gga20518 ENSGALP00000008925
Gallus gallus (Gga) gga20519 ENSGALP00000008926
(NOLC1)
Gallus gallus (Gga) gga21500 ENSGALP00000015152
Gallus gallus (Gga) gga21501 ENSGALP00000015153
Gallus gallus (Gga) gga21502 ENSGALP00000015154
Gallus gallus (Gga) gga21498 ENSGALP00000015155
(WIPF1)
Q5F3Q7
Gallus gallus (Gga) gga21499 ENSGALP00000015156
Homo sapiens (Hsa) hsa2751 ENSP00000251819
Homo sapiens (Hsa) hsa18889 ENSP00000272746
(WIPF1)
O43516-3
Homo sapiens (Hsa) hsa4516 ENSP00000299255
Homo sapiens (Hsa) hsa18891 ENSP00000312035
Homo sapiens (Hsa) hsa15508 ENSP00000330326
(FLJ22184)
Q9H6K5
Homo sapiens (Hsa) hsa14554 ENSP00000342251
Homo sapiens (Hsa) hsa23785 ENSP00000344138
Homo sapiens (Hsa) hsa4517 ENSP00000348587
Homo sapiens (Hsa) hsa18890 ENSP00000352802
(WIPF1)
O43516-1
Homo sapiens (Hsa) hsa6861 ENSP00000353568
Kluyveromyces lactis (Kla) kla803 KLLA0B06039g
Kluyveromyces lactis (Kla) kla3537 KLLA0E13079g
Mus musculus (Mmu) mmu1201 ENSMUSP00000006171
(MGI:1891344)
Mus musculus (Mmu) mmu13840 ENSMUSP00000015320
(MGI:1918019)
Q6ZQK6
Mus musculus (Mmu) mmu14788 ENSMUSP00000040809
Mus musculus (Mmu) mmu25561 ENSMUSP00000065481
(MGI:3605626)
Q6NVE5
Neurospora crassa (Ncr) ncr2993 NCU03089.2
Neurospora crassa (Ncr) ncr3923 NCU04047.2
Neurospora crassa (Ncr) ncr10596 NCU11138.2
Oryza sativa (Osa) osa33812 4652.m00098
Plasmodium falciparum (Pfa) pfa4864 PFL0390c
Rattus norvegicus (Rno) rno9233 ENSRNOP00000003250
(RGD:1308976)
Rattus norvegicus (Rno) rno18789 ENSRNOP00000024922
(RGD:620887)
Q6IN36
Rattus norvegicus (Rno) rno4200 ENSRNOP00000025788
(RGD:621578)
P41777
Rattus norvegicus (Rno) rno7908 ENSRNOP00000041388
(RGD:1566084)
Saccharomyces cerevisiae (Sce) sce3992 YKR092C
(S000001800)
Saccharomyces cerevisiae (Sce) sce4450 YLR337C
(S000004329)
Schizosaccharomyces pombe (Spo) spo1480 SPAC23A1.17 O42854
Schizosaccharomyces pombe (Spo) spo2856 SPBC13E7.09 Q9P6R1
Schizosaccharomyces pombe (Spo) spo3795 SPBC1711.05 Q9P785
Yarrowia lipolytica (Yli) yli1225 YALI0B11770g
Yarrowia lipolytica (Yli) yli2180 YALI0C11154g
Yarrowia lipolytica (Yli) yli2662 YALI0C23452g
Yarrowia lipolytica (Yli) yli3806 YALI0D26191g